Sander lucioperca (pikeperch): 116045971
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Entry
116045971 CDS
T07345
Symbol
snap47
Name
(RefSeq) synaptosomal-associated protein 47 isoform X1
KO
K18212
synaptosomal-associated protein 47
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116045971 (snap47)
Membrane trafficking [BR:
sluc04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-47
116045971 (snap47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps36_ESCRT-II
Motif
Other DBs
NCBI-GeneID:
116045971
NCBI-ProteinID:
XP_031149890
Ensembl:
ENSSLUG00000018881
LinkDB
All DBs
Position
9:9189970..9195464
Genome browser
AA seq
425 aa
AA seq
DB search
MSRDVPIHSWPGSYYINSEKRWENGTLSLTRTMVRFVSNQSKESLASFRLSRIMELKMES
SSFIFSTLTVLEEGNVKHWFGSLKPNRVVVYNVLEHFWRERLLSPSSEARGAECKPSKGR
ELISLVAGAQRRLEDTGSVLSHQGEQFDNMMQGLEKIDSDLGVADKLLLELESPSWWPFG
KLPWKTQQEAKAQDAARAGAAAASAAGKGSSRNKVIASIPAVVTKGGDSDLKPGCLLVLV
SSVEVRDTNCQLLHRFERNDIDEIRVHSPYEITVRQRFIGKPDICYRFLSAKMPEAMSVL
EMQYKKKVEFMNEYTAFKTTPVSSPCDTEGSNWNEGLLQRCQDTELPLEVPAGELSQLQV
HVLQPSVSQAEAQELKQMLMQLKNLALEAETELERQDDVLDELTSSTDRATMHIEKHTCR
MKRLL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagccgggacgtccctatccacagctggcccggttcctattacatcaacagtgagaag
cggtgggaaaatggcaccctgtccctcaccaggaccatggtgcgcttcgtctctaaccag
agtaaggagagtcttgccagcttccgcctctccaggatcatggagctcaagatggagtcg
tctagttttatcttcagcactctcacagtgcttgaagagggcaatgtgaaacactggttt
ggctcgcttaagcccaacagggtggtggtttataatgtcttagagcatttctggagagaa
cgtcttttgtcccccagctcagaggcccggggagccgaatgtaaaccctctaaaggcaga
gagctgatcagcctggtggcaggggcccagagaagactggaggacacaggcagtgtcctc
agccatcaaggagagcagtttgacaatatgatgcagggactggagaagattgactcagat
ctgggcgtggctgataaacttttgttagagctggagtctccctcctggtggccttttggt
aaacttccttggaagactcagcaggaagccaaggctcaggacgctgcaagagctggagct
gccgctgcttctgcagctggcaaagggtccagtagaaataaggtgatcgcaagcatccca
gctgtagtgaccaaaggcggggactcagacttaaaacccggatgcttgttggtgctggtg
tcctcagtggaggtgcgagacacaaactgtcaactccttcaccgcttcgaacgaaatgac
atcgacgaaatcagggtgcacagtccgtatgagatcaccgttagacagcggtttattggg
aagccagatatatgctacaggttcctgtctgccaagatgccagaggcaatgtcagtgtta
gagatgcagtacaaaaagaaagtggagttcatgaatgaatacactgctttcaaaacaact
ccagtttcatctccgtgtgatacagaggggtcaaactggaatgaaggtttgctgcagagg
tgccaagacacagagctcccgctggaggtcccagcaggagagctgtcccagttgcaggtg
cacgtcctccagccatctgtcagtcaggctgaggcccaggaactcaaacagatgctgatg
cagctgaagaaccttgccctggaggcagagacagagttggaacgacaggatgatgttctg
gatgagctaaccagctccactgaccgagccaccatgcacatagagaagcacacctgccgc
atgaaaagactgctgtag
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