Sander lucioperca (pikeperch): 116046000
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Entry
116046000 CDS
T07345
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sluc03021
]
116046000 (aff3)
Transcription machinery [BR:
sluc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
116046000 (aff3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
116046000
NCBI-ProteinID:
XP_031149943
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All DBs
Position
8:17456896..17473785
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AA seq
1231 aa
AA seq
DB search
MPTVLGGKGELSIVCFLLRCAYSQVTRSQHNCAKDILEDMTQSWPSQQALGGDWAQRILY
NPKEAKLPTAQQRQNRGDVQLRTTRHPRVAPHKSMLADDLKLSSDDDDTQRVTHESASWD
GHSLSAQRVHTHGRRVRHSSSDSSGSDSTAESGSSSLHSRSPSRSPDVLPDPASPANTQP
PCNSKETDHPSAAQWQLDKWLKKSRNKSASSDQDPSQSIAGRLPSPHTQRAPSPARSWDS
NREYSPSQSPIPSPQFNYSHNNSPLPSPGYSYCPSPSPFPSTCQSPSPSPRHNPIPSPVP
SVCPSPCGSLRASRSPSPIPRDPPRRPSPSVPAPSRVRHYPEVRTTQPSLTTNPHRTKNR
TTPLPYTDTKSKPKNSTHLQPTHQHRSKTRPTEDQDQSKPKASALLNSNQSHGHKPRPKP
NFHPSSKQLSEAPKAKHTSHLEQIQSSRSNHKPRPSFQSSLQHSPTTAKHLILTSRETNS
DHSSHSQSTSKAATKSNTGLNPRSTTSLKHRAKSSEATAPNSVHVDLTKTTQKKPQSKEQ
EVEHRGDHLTQAEGRKHERKEDRHQEKQPGKQERKEDRRLAEEQLLRRPWIQSSAEEEEE
EAEEEEGVIERQRRREETARGEKRRGREQQHRREWQTVQAKQRLPTNTERHRIQDNSHHQ
GRTKKGGRSEEERELQQDPSPPLSRSPTPHRPSSSPSASTSSNSDSESEYQAPITKVPAD
STSHKRLPKRGQLGPGRPDANRPKVVHPRGPTSGNPSEGQQSEGKQRLYTLVPFGRGEQA
TAPSQRGLRNLVVQIDLCLLKRVPDSTTSSTVKKPSSSSSSSTKDKQRETMKHLYVPETV
TKDSKRKRKLENGVSQSESKRSIPYANDLSGHTESSSHTAERNFVTETTHNGYLEEYLDS
KRPLSPLSPLSPLSDSPESTKPPLKTKTSEQHHVHVHKNRDKNRDSAIKPKMEVECVKVS
RQPQPPLESWGPAGHRGTVPNNETPHHAEYYLHEAKRMKHRADAMVDKLGKAVNYVDAAL
SFMECGKAMEEGPLEAKSPYTMYSETVELIRYAMRLKSHSGPGARQEDKQLAVLCFRCLA
LLYWQMFRLKKDHALKYSKVLLDYFKTSPKVPSTPPCWSDSGKDTGGPPSSLSPNAKHLG
RGSHGGNTFPSVISIPQRIHQMAANHLNITNSVLYSYEYWEVADNLAQENKEFFNYLNTL
SGPLTLHSSIANAVQYTRQALQWIRISAKLN
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtcctcggtggcaaaggggaactttccattgtctgttttctactcagatgc
gcatattctcaggtaacaagaagccaacacaactgtgccaaagatattctggaggacatg
actcagtcctggccgtcccagcaagccttagggggtgactgggcccaacgaatcctctac
aaccctaaggaagcaaaactaccgactgcacagcaaaggcaaaatcggggggatgtacag
ctgcgaacgacccgtcaccctcgcgtggcacctcataaatcaatgcttgctgatgacctg
aagctgagcagtgatgatgatgacactcaaagggtaactcatgagtcagcttcctgggat
ggacacagcctgtcagcacagcgagtgcacacacatggcaggcgggtgagacattccagc
tcagactcttcaggctcggactccaccgctgagtcgggcagcagcagccttcactcccgg
agccccagccggagcccagacgttctcccagatcctgcgtcgcctgccaacacgcagcca
ccgtgcaacagcaaggagactgatcacccctctgcggcccagtggcagttggataaatgg
ctaaagaagtcccggaacaaatctgccagcagtgaccaggatccctcccagagcattgca
ggacgccttccctctcctcacactcaaagagccccatctccagccaggtcctgggacagc
aatcgggaatacagccctagccaaagccctattcccagcccacagtttaattacagccac
aacaacagccccctacctagccctggttatagctactgccctagccccagcccatttccc
agcacatgccaaagtcccagccctagcccaaggcacaatccgatccctagcccggttcca
agtgtatgccccagtccatgtgggagcctgagagcaagccgtagccccagtcctatacct
agagaccctccaagaagacccagtcccagtgtacctgctccttccagggtccggcactac
cccgaggttcggacaacacaacctagcctaacaaccaatccccacaggacaaaaaatagg
actactccattgccttacaccgacacgaaaagcaagcctaaaaacagtactcatcttcag
ccaactcaccagcacaggtccaagactcgacccacagaggaccaagaccaaagcaaaccc
aaggcttctgctcttttaaactctaaccagagtcacggccacaaacctagacctaagcct
aactttcatccaagttctaaacagctctctgaggctcccaaagccaaacacacatcacat
ttagagcaaatccagagtagcagatccaaccacaagcccaggccttcatttcaatctagc
ttacaacatagccccacaacagctaagcacttaattctcactagtcgtgaaaccaactct
gatcatagttctcattcccaatctacctctaaagctgctactaaatctaatactgggttg
aaccctagatcaacaaccagccttaaacatagggccaagtcttctgaggctacagcgcca
aactctgtgcatgttgaccttacaaaaacaacacaaaagaaaccccagtccaaggaacag
gaggtggaacacagaggagatcatttgacccaagcagaggggagaaaacacgagagaaaa
gaggacagacatcaggaaaaacaaccagggaaacaggagagaaaggaagacaggaggctg
gcggaggagcagctattgagacgtccctggatccagagttcggcagaagaagaggaggag
gaggcagaggaggaggagggagtgatagagaggcagaggaggagagaggagactgcaaga
ggggaaaagaggagggggagggaacagcaacatagacgcgaatggcaaacagtccaggcc
aaacaaagactgcctaccaacactgagcgacaccgcattcaagacaactcacaccaccag
ggaaggacaaaaaagggagggagaagtgaggaggagagagagttgcagcaagacccatca
cctcctctgtcacgttccccaactcctcacagaccatcctcctcgccctctgcctcaacc
tcttcaaattcagattcagaatcggaatatcaggctccgatcactaaagttccagcagac
tccacctctcacaagagactccccaagagagggcaactaggcccaggcaggcctgacgcc
aacaggccgaaggtggtgcaccccagaggaccaacctcaggtaatccaagtgaggggcag
cagagtgaggggaagcaaagactctacaccctggtcccgttcgggcgtggtgaacaagct
acagcgccttcccagcgagggcttagaaatctggtggtgcagatagacctctgtcttctc
aaaagggtcccggacagcactactagttccactgttaaaaaaccctcctcttcctcctct
tcatcaaccaaggataagcaaagagagactatgaaacacctgtacgtccctgagactgtg
acgaaagacagtaaaaggaaacgcaagttggagaatggtgtgtcacaaagtgaaagcaag
aggagtattccgtatgcaaatgacctctcaggccacacagagtcttcatctcacacagct
gagcgcaactttgtgaccgagaccacacacaacgggtacttggaggagtacttggacagc
aagaggccattgtctcccctgtctcccctgtctccactgtccgacagcccggagtccacc
aagcctcccctcaaaacaaagacttcagagcagcatcacgtccatgtccacaaaaacaga
gacaagaatagagattctgctataaagcccaagatggaggtggaatgtgtcaaagtgtca
agacagccccaaccaccactcgagtcctggggccctgcaggacacagggggaccgtgcca
aacaatgaaactccgcaccatgctgagtactacttacatgaagctaaaaggatgaagcac
cgtgccgacgcaatggtggacaaactggggaaggctgtgaattacgttgatgctgctctc
tccttcatggaatgtgggaaagcaatggaggaagggccactagaggcaaagtctccttat
accatgtactcagagacagtggagcttattaggtacgcaatgaggctgaagagccactct
ggccctggggcgagacaggaagacaaacagctggcggttctgtgtttccggtgccttgcc
ctcctttactggcaaatgtttcgtttaaagaaggaccatgcactgaaatactccaaagtt
cttctggactactttaagacttctcccaaagtgccttctacaccaccctgttggagtgac
tctgggaaggatacaggaggacccccttcttcactctcacccaatgccaaacacctggga
cggggttcacacgggggcaacaccttcccctctgttataagcattccccaacgtatccac
cagatggcagcaaatcacctgaacattaccaacagtgtcctgtacagctatgagtactgg
gaggtggcagacaacctcgcacaggagaataaagagttcttcaactacttgaatacgttg
tctgggccattgactcttcacagtagcattgctaacgctgtccaatacaccagacaggct
cttcagtggatacgcattagtgccaaacttaactaa
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