Sander lucioperca (pikeperch): 116046114 Help Entry 116046114         CDS       T07345                                  Symbol tnr Name (RefSeq) tenascin-R isoform X1   KO K06252   tenascin Organism sluc  Sander lucioperca (pikeperch) Pathway sluc04510   Focal adhesion sluc04512   ECM-receptor interaction sluc04518   Integrin signaling Brite KEGG Orthology (KO) [BR:sluc00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     116046114 (tnr)    04518 Integrin signaling     116046114 (tnr)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     116046114 (tnr)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sluc00536]     116046114 (tnr) Glycosaminoglycan binding proteins [BR:sluc00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    116046114 (tnr) SSDB OrthologParalogGFIT Motif Pfam:  fn3 Fibrinogen_C EGF_TEN EGF_Teneurin FN3_DSCAM-DSCAML_C Fn3_Dep-1_3rd Fn3_PBP1 EGF_Tenascin Pur_ac_phosph_N EGF_2 FN3_Tor_3rd Fn3_Dep-1_2nd Interfer-bind Fn3_VIN3 DUF4998 NDNF DUF7949 EGF_PEAR1L Motif Other DBs NCBI-GeneID:  116046114 NCBI-ProteinID:  XP_031150183 Ensembl:  ENSSLUG00000001913 LinkDB All DBs Position 9:12410601..12604289 Genome browser AA seq 1459 aa AA seqDB search MTFREMVSAPREKCWLSKPYPPVQQLQPRGPTLKGSTLVGALKVQSRTETGNKRTKYSQK RCEWTGVVRFLPSMQLAQQHNRATVPTAGWILVLALFLALQGAAHAAPSGDSKLVRTTRV RRQTPGGNQPPFASSANETLREQPVVFNHVYNINVPLESLCSVDLDASAPPAPGDGSRAE LGSTPSVDGQMDLNGPTEYTEQTLDADSQVTFTHRINIPKAACGCPATTTIQQLATRVEM LEREVSLLRAQCGSGCCGESSAMGHMDFVPGCSGHGSFSFDLCGCICEEGWSGKNCSEPR CPDDCSGQGVCVEGECVCDRDFGGDNCSEPRCPSDCSGRGLCIDGECVCEESFTGEDCMV GRCLNDCSDQGLCINGTCQCRPGYVGEDCSLVYCANNCSKKGVCKEGFCVCQDGFAGDDC NSVAPAMNVKIRGVTDNTVDVEWEGSVVMTDFLVTYTPSSPGGVQLEIRIPGNTTTCTIS GLEAGMEYNINVFAVINNSISVPASITVSTYLSNPDGLVFKSITETSVEVQWLPFYYSFD GWEISFIPKDNDGGMTAQLPSTITYFLQTGLRPGEEYTVNLVALRDQGRSQPVTATVTTL IDGPTQLIVRDVSDTVAFVEWTPPKAKIDQIVLRYGLVGGEGPRTTFRLQPTLSQYSLQV LRPGSRYQVSVSGVRKGNESGSISTEFTTALSFFSEIDAPKNLRLLSKTSTTLELEWENS EAEVEGYQVVYSTLAGDQYDKVIVPRNEGATTKTSLTDLLPGTEYGIGISAMKDNNQSTP ATMNARTGLDVPMDLTVTASTDNTISLVWGVVQGPIDHYKITYTSSSGVATELTVPKDVT TTTLMDLEPGTEYTITVAARRGRQQSNAATIDAFTGIRPVTHLYLSEVTSDSVSVAWSAP APPADLFILSYSSADGTDTSKVTLDGSKTRSLVQGLLPSTQYTVSLITIQGDVTSEPITA SLTTGMDPPKEMTVSDVTEDAVTISWIRPLAPFEYYKLSYQSARGRVDSVVIDSDVTNYT LSSLFPATEYEISLNAVRGSQESKVVSTSVFTAMDMPAELTALNITPQGALLRWNPPVSS VDNYVLTLTHNQVTADTFLVEGNKQEHQLSNLKPSTTYSVALYATKGPLTSGTVITNLQT PMDAPLNLTASEVNHRSALISWQPPIAEIDNYMLTYKSTDGSRKELILDAEDTWIRLEGL AETTEYTVKLQAAKGLDTSAVVSTTFTTGSRLFATPQNCAQHLLNGETLSGVYTIYINRD PSQGVQVYCDMTTDEGGWIVFQRRQNGLTDFSRKWSDYRVGFGNLEDEFWLGLDNIQRLA AQGRYEMRIDMRDGQESVYANYDKFSIGDARNLYKLRIGEYNGTAGDSLSYHQGRPFSTK DRDNDIAVTNCALSYKGAWWYKNCHRANLNGKYGESRHSQGINWYHWKGHEFSIPFVEMK MRPFNFRSISSKRRRSAPV NT seq 4380 nt NT seq  +upstreamnt  +downstreamnt atgacttttcgggagatggtgtcagcccccagggaaaaatgttggctctcaaaaccgtat cctcctgttcaacagctgcagcccagaggaccaacactaaaaggatcaactctggtgggt gccctcaaggtgcagagtcggacagagactggcaacaagagaacaaagtactcacagaaa aggtgtgagtggacaggagtggtgaggtttcttcccagcatgcaactggcacagcaacat aacagggccactgtgcccacagcaggctggatcctagttttggctctctttcttgctcta cagggtgccgctcatgctgctccatcaggagacagcaagctggttcgtaccaccagagtg aggagacagaccccaggggggaatcagcccccctttgcttcctcagccaacgaaaccctg cgggagcaacctgtggtctttaaccacgtctacaacatcaatgtacccttggagtctctg tgctctgtcgacctggatgcctccgcgccacccgccccaggtgacggttctcgtgccgag ttggggtccacaccttctgtagatggtcaaatggatttaaatggaccaacggaatacact gagcagacgctggatgctgatagccaggtaacatttactcaccgcatcaacattccaaaa gctgcatgtggttgtccagcaacaactacaatccagcaacttgccaccagggtggagatg ctggagagagaagtttcactgctcagagctcagtgtgggtctggatgctgtggggagagc tcagccatgggtcatatggactttgtcccaggctgcagtggccatggcagcttcagtttc gacctgtgtggctgcatctgtgaggaaggttggtccggcaaaaactgttcggagcctcgc tgcccggatgactgctccggccagggggtgtgcgtggaaggggagtgcgtgtgtgaccgt gactttggaggcgacaactgctcagagccgcggtgcccttcagactgctcgggtcgcggg ttgtgtatcgatggggagtgtgtgtgcgaagagtccttcactggcgaagactgcatggtc gggagatgtcttaacgactgctcggatcaagggctgtgcatcaacgggacgtgccagtgc aggcctgggtacgtgggagaggactgctcgctggtctactgtgccaacaactgcagcaag aagggagtctgcaaggagggattctgtgtctgccaggatggatttgcaggagatgactgc aactctgtggcaccggccatgaatgtgaagatacgaggcgtgactgataacactgttgac gtggagtgggaggggtcagttgtgatgacagatttcttagtgacctacacaccaagcagc cctggaggtgtgcaacttgagataaggattccaggcaacaccaccacctgcactatctca ggcctggaggcaggcatggagtacaacatcaacgtgtttgctgtcattaacaacagtatc agcgtccctgccagcattactgtttcgacctatctctccaatccagatggtttagtcttc aaatctatcacagagacgtcagtggaggtccagtggttacccttctactattccttcgat ggatgggagatcagcttcatccccaaggacaatgatggagggatgactgcacagctgccc agcaccatcacttactttttgcagactggtttgagaccaggggaggagtataccgttaac ctggtggcgctccgagaccagggtcgaagccagccagtcactgccactgtcacaacattg attgatggccccactcagctgattgtgcgggacgtgtcagacaccgtagcatttgtggag tggacaccaccaaaagcaaagattgatcagatcgtgttacgttacggcctggtgggagga gagggtccacggaccaccttccgcctccagcccacactcagccagtactccctgcaggtt ttgcgtcctggctcgcgttaccaggtgtctgtgagtggagtgagaaaaggaaatgaaagc ggatccatttccactgaatttactaccgctttatcgttcttctcagagatcgatgccccc aagaacctgcggcttttgtccaagacctccaccactctggagcttgaatgggaaaacagt gaggctgaggtggagggctaccaggtggtgtacagcactttagcaggagaccagtatgat aaagtcattgtaccacgcaatgagggagccacaactaagacctccctcacagacctgctg ccaggcacagagtacggcatcggcatttctgccatgaaagataacaaccagagtacacca gcaacaatgaacgccaggacgggtctggatgtgcccatggatctaactgtgacggcttct acagacaacaccatctctttggtgtggggcgtggtccagggccccatcgaccattacaag atcacctacacatcctcctctggcgtcgctactgagctgacggtgcctaaagatgtaacc accaccactctgatggaccttgagcctgggactgagtacaccatcactgtggcagcgaga agaggaaggcaacagagcaatgcagctaccatagatgccttcacaggaatcaggcccgta acccacctctacttgtcagaggtgacttcagactcagtgtcggtggcgtggagcgcccca gcaccgcctgctgacctcttcatcctgagctacagctctgcagacgggaccgacacctct aaggtgacactggacggctccaagacgaggtcactggtccaggggctgctgccgtctact cagtacaccgtcagtctaatcacaatacagggggatgttacctctgagcccattacagca tcactcactacaggcatggacccaccaaaagagatgacagtgtcagatgtgaccgaagac gcagtgactatctcttggatcagaccactggccccatttgaatactataagctgtcctac caatcagccagaggtcgagtggacagcgtggtgattgacagtgatgtgaccaactacacc ttgtccagcctgtttcctgctacagaatacgaaatcagcctcaacgctgtcagagggagt caggagagcaaagtggtcagcacctccgtcttcacagcgatggacatgccagctgagttg acagctctcaacatcactccacaaggagccctgctgagatggaatccacctgtttccagc gtcgacaactacgttctgaccctcacacacaaccaggtgacagctgacactttccttgtg gaaggcaacaagcaggagcaccagctgtccaaccttaagccaagcaccacctactctgta gccctctacgccaccaaaggacccctcaccagcggcaccgtcatcaccaacctccaaaca cccatggacgcacccctgaacctgacagccagtgaagtgaatcaccgcagcgctctcatc tcctggcaaccgccaatcgcagaaattgacaactacatgcttacctacaagtcaaccgac ggcagccgcaaagagctgatcctggatgcagaggacacctggattcgactggagggactg gctgagaccacagagtacactgtcaagctccaggctgcaaagggacttgacaccagcgct gtagtctccactaccttcactacagggagtcgtctatttgcaacacctcagaattgtgcc caacacctgctgaatggagagacgctgagcggcgtctacaccatttacatcaacagagac cccagccagggcgtgcaggtgtactgcgacatgaccactgatgaaggaggctggattgta ttccagcgtcgtcagaacggcctgacagacttttccaggaagtggagtgactatcgggtc ggctttggaaacctggaggatgaattctggcttggtcttgacaacatccagaggcttgct gctcagggccgttatgagatgagaattgacatgagagatggacaggagtcagtctacgcc aattatgacaaattctccattggagatgcgagaaatctctacaagctcaggataggagag tacaatggcactgctggtgactccctgagctaccaccagggccggcccttctccacaaaa gacagagacaatgacatcgctgtcactaactgtgccttgtcttacaaaggagcctggtgg tacaagaactgccaccgggccaacctcaacggcaaatacggcgagtccagacacagtcag ggtattaactggtaccactggaaaggccatgagttctctattcccttcgtggagatgaag atgaggccattcaacttccgtagcatcagcagcaagaggaggcggtctgcccctgtataa

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