Sander lucioperca (pikeperch): 116046180
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Entry
116046180 CDS
T07345
Symbol
cldn1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03272
Virion - Hepatitis viruses
sluc04382
Cornified envelope formation
sluc04514
Cell adhesion molecule (CAM) interaction
sluc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
116046180 (cldn1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116046180 (cldn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116046180 (cldn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116046180 (cldn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sluc03037
]
116046180 (cldn1)
04147 Exosome [BR:
sluc04147
]
116046180 (cldn1)
Cilium and associated proteins [BR:
sluc03037
]
Other cilia and associated proteins
Stereociliary proteins
116046180 (cldn1)
Exosome [BR:
sluc04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
116046180 (cldn1)
Exosomal proteins of colorectal cancer cells
116046180 (cldn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
OppC_N
SHR3_chaperone
DUF6479
DUF3112
Motif
Other DBs
NCBI-GeneID:
116046180
NCBI-ProteinID:
XP_031150297
Ensembl:
ENSSLUG00000007378
UniProt:
A0A8D0CU39
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All DBs
Position
9:complement(3850276..3853903)
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AA seq
211 aa
AA seq
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MANAGIQLLGFTLAFLGFIGLIASTVMVEWKASSYAGDNIITAQALYEGLWKTCASQSTG
QVQCKVYDSLLQLPGIVQGTRGLMLCAIMMCFISIMLDMVGMRCTTCMSEQPEQKDKVAL
AGGVIFIIAGVLALVGTSWYGQRIAQEFYDPFTPTNSKYEFGSALFVGWGAAALIIIGGS
FLCCNCSSKGSGKSPRYPAPRSAGQPDKNFV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgcaggcatacagcttctcggcttcacactggccttcctgggcttcattggc
ttgatagcatccacagtcatggtggaatggaaagcttcatcatatgcaggagacaacata
atcacagctcaggcgttgtatgaagggctgtggaagacctgtgcatcacagagcacaggt
caagttcagtgtaaagtgtatgattcacttctccagctaccagggattgtacagggcaca
cgaggactgatgctgtgcgccatcatgatgtgctttatttctatcatgttggatatggtg
ggcatgaggtgcaccacctgtatgtcagaacaaccggagcagaaggacaaagtggctcta
gctggaggggttatcttcattatcgctggtgtgcttgctctggtgggaacgtcttggtat
ggtcagagaatagcccaggaattctacgacccattcactccgactaattcaaagtatgaa
ttcgggagtgccctgtttgtcggatggggagctgccgctctcatcattataggaggaagc
ttcctctgctgcaactgctccagcaagggctcagggaaatctccacggtacccagcgccc
cgctctgccggccagccagacaagaactttgtctag
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integrated database retrieval system