KEGG   Sander lucioperca (pikeperch): 116046669
Entry
116046669         CDS       T07345                                 
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116046669 (u2af1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sluc03041]
    116046669 (u2af1)
Spliceosome [BR:sluc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    116046669 (u2af1)
 Complex B
    116046669 (u2af1)
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 116046669
NCBI-ProteinID: XP_031150931
Ensembl: ENSSLUG00000020441
LinkDB
Position
8:18412215..18418753
AA seq 241 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ
SADGLTCAISDMEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRYE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKGRHRSRSRSRERRSRSRDRGRGGGGGGGGGGGGRDHERRRSRDRERSGR
F
NT seq 726 nt   +upstreamnt  +downstreamnt
atggcggagtacctggcgtccatttttgggacagagaaagataaggtcaactgctctttt
tattttaaaattggtgcctgccgacatggcgaccgctgctccagattacacaacaagccg
acattcagccagacaattgccctcctgaacatttaccggaaccctcagaatagtgcccag
tctgctgatggtctaacctgtgccatcagtgacatggagatgcaggagcactatgatgag
ttttttgaggaggtcttcacagagatggaagaaaagtacggagaggtggaggagatgaac
gtatgtgacaacctcggggaccacttagtaggaaatgtgtacgtgaagttccgttatgaa
gaggacgcggagaaggctgtgatagacctgaataatcggtggtttaatggacagcccatc
catgctgagctctctcccgtcacagacttcagagaagcctgctgtcgccaatatgaaatg
ggggaatgcactcgtggtggtttctgcaacttcatgcatctgaagcccatctcgcgtgaa
ctgaggagagagctctatgggcgtcggaggaagggccgccataggtcccggtctcgctcg
agagagaggcgatctcgctcgagggacagaggtcgaggaggtggagggggaggaggtgga
ggaggaggtggccgtgaccacgagagacgtcgctccagagacagagagcgttcgggacga
ttctga

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