Sander lucioperca (pikeperch): 116046744
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Entry
116046744 CDS
T07345
Name
(RefSeq) ATP-dependent RNA helicase DDX39A-like
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116046744
Enzymes [BR:
sluc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116046744
Spliceosome [BR:
sluc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
116046744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116046744
NCBI-ProteinID:
XP_031151006
Ensembl:
ENSSLUG00000020763
LinkDB
All DBs
Position
21:29355857..29375844
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AA seq
427 aa
AA seq
DB search
MAENDVDNELLDYEEDEEPQGAPESAVPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAII
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMSSVKAAVFFGGMVIRKDEEVLKKNCPHIVVGTPGRILALIR
NKTLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFKITPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCI
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNDVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaatgatgttgataacgagctgctcgactatgaagaagatgaagagcctcaa
ggagcgcccgagagtgcagtccccgctggcaagaaggaggtcaagggttcctacgtttcc
atccacagctctggcttcagagactttctgctcaaaccagagctgctccgtgcaatcatc
gattgtggttttgagcatccgtctgaagtccagcatgaatgcatcccacaggctatcctg
ggcatggacatcctgtgccaagccaaatctggtatgggaaagacggcggtgtttgtgctg
gccacactgcagcagattgaacctgttgatggacaggtgtctgtattggtcatgtgccac
acgcgagagctggccttccagatcagtaaagagtacgagcgtttctccaagtacatgtcc
tcggtaaaggcagccgtgttctttggcggcatggtcatcaggaaggacgaggaagtcctg
aagaagaactgtccccatatcgtggtgggaacccccggccgcatcctcgctctcatccgc
aacaagacgctcaatctgaagaacgtcaagcacttcgtcctggatgagtgcgacaaaatg
ttggagcagctagacatgaggcgtgacgtacaggagatcttcaagattacaccccatgag
aagcaggtcatgatgttcagcgccacgctgagcaaagagatccgaccagtctgccgcaaa
ttcatgcaggatcccatggaagtatttgtggacgacgagaccaaactgacgctccacggc
ctgcagcagtactactgcaagctgaaggacagcgagaagaaccgcaagctctttgacctg
ctcgacgtgttggagttcaaccaggtggtgatctttgtcaagtcagtgcagcgctgcatc
gctctggcccagcttctggtggaacaaaatttccctgccattgccatccacaggggaatg
gctcaggaggagaggctgtctcgctatcagcaatttaaggacttccaaaggcggatcctg
gtggccactaacctctttggccgagggatggacattgagcgggtcaatatcgtcttcaac
tacgacatgccagaagattctgacacctatttgcacagggttgcccgtgctggcaggttt
ggaaccaaaggcctggctataacctttgtgtctgacgagaccgatgccaagactctgaac
gatgttcaggaccgttttgaagtcaacgtggccgagcttccagacgagatcgacatctcc
tcttacatcgagcagtccagatga
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