Sander lucioperca (pikeperch): 116046807
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Entry
116046807 CDS
T07345
Symbol
samm50
Name
(RefSeq) sorting and assembly machinery component 50 homolog A isoform X2
KO
K07277
outer membrane protein insertion porin family
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116046807 (samm50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sluc03029
]
116046807 (samm50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sluc02000
]
116046807 (samm50)
Mitochondrial biogenesis [BR:
sluc03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
116046807 (samm50)
Transporters [BR:
sluc02000
]
Other transporters
Pores ion channels [TC:
1
]
116046807 (samm50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
FLQE3_permease
Motif
Other DBs
NCBI-GeneID:
116046807
NCBI-ProteinID:
XP_031151072
Ensembl:
ENSSLUG00000015649
LinkDB
All DBs
Position
7:complement(18958709..18965229)
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AA seq
472 aa
AA seq
DB search
MGTVHARSLDPLPMRGPELGVQPDDIEAPGIEHEPKQEVLENKDVVVQRVHIDGLGRTKE
DLLTYEIAEVFRARNLIDVMRKSHEARRKLLRLGIFRKVEVVIDTSRGEDALPNGLDVTF
EVTELRRMTGSYNTMVGNNEGSMVLGLKLPNALGRAEKMTFQFSYGTKETSYGLSFFKPQ
PGNFERNISLNVYKVTGQFPWSSLRETDRGISGELSFPVWKTNQTLKWEGVWRELGCLAR
TASFAVREESGHSLKSSLSHSMVIDTRNSSILPRKGGLLKIHQELAGYTGGDASFLKEDF
EIQLNKTLLWDSVLSASLWGGLLLPIGDKPTSIADRFYLGGPTSIRGFSMYSLGPQSEDM
AGDYLGGEGYWAGGLHLYTPLPFRPGKGGFGDLFRTHFFLNAGNLCNLNYGEGPKAHLKK
LAESIRWSYGLGIVLRLGNIARLELNYCIPMGVQSGDRICDGVQFGAGIRFL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgtccacgccaggagcctggaccctctgcccatgcgagggccagagctagga
gttcaacctgacgatatcgaggctcccgggattgagcacgagccaaagcaagaagttctt
gaaaacaaggatgttgtagttcaacgagtgcacatagatgggctcggaagaaccaaggag
gacctgttgacttatgaaatcgcagaagttttccgggcaaggaacttgattgatgtgatg
cgaaagtcccatgaagcccgacggaagctgcttcgtctcggtattttcagaaaagttgaa
gttgttattgacacgtcacgaggtgaggatgctcttcctaacggcctcgatgtgacgttt
gaagtcaccgagctgagacggatgaccggcagctacaacaccatggttggaaacaacgaa
ggaagcatggtactaggcctgaagttacccaatgcattaggtcgagcagagaaaatgacc
tttcagttctcctacggaaccaaagagacatcatacggcctgtccttcttcaaaccccaa
ccaggaaactttgaacgcaacatctcactcaatgtgtacaaagtaacaggtcagtttcca
tggagttcactgagggagacggatcgaggcatctctggagaactgagcttccctgtgtgg
aagaccaaccaaaccctgaagtgggagggagtgtggagagagctgggctgtttggctcgc
actgcctcatttgccgtccgggaggagagtggccattccctaaagtcctcactttcgcat
tctatggtcatcgacaccagaaactcctccatccttcccaggaaaggtggcctgttgaag
atccatcaggaacttgctggttacactggaggagacgccagtttcctgaaggaggacttt
gagatccagctcaacaaaacactcttgtgggactcggtcctttctgcctcattgtggggt
ggtttgctcctgcccattggtgacaagccaacaagcatagcagacaggttctatcttggt
ggccccaccagtatcaggggattcagtatgtacagtttgggcccacagagtgaagatatg
gcaggtgactacctgggaggagagggctactgggctggaggcctccacctttacacccct
ctacccttcagaccaggcaaggggggctttggtgatctcttcagaacacacttcttcctc
aatgccggaaacctttgtaaccttaactatggtgaggggccaaaagcacatttgaagaaa
ctggcagaaagcatccgttggtcatatggactgggcattgtgctgcgtttgggaaacatt
gccagactggagctgaattactgcattcccatgggagtccagagtggagacaggatatgt
gacggggtccagtttggagcaggaatcaggttcctgtga
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