Sander lucioperca (pikeperch): 116046821
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Entry
116046821 CDS
T07345
Name
(RefSeq) transcription factor SOX-6-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116046821
Transcription factors [BR:
sluc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116046821
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
AAA_23
Motif
Other DBs
NCBI-GeneID:
116046821
NCBI-ProteinID:
XP_031151110
Ensembl:
ENSSLUG00000019152
LinkDB
All DBs
Position
7:19265826..19379965
Genome browser
AA seq
779 aa
AA seq
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MMSSMRATPPFHAPSEEEEAMGQDNVAWASEEREGPKETPSPSSHDRPHPDELQPIREKL
TDAEWENVVPAAMDNESSKGCSVYSYRTNSTSPPKPEECSRDRGDPMISLAFGTPERRKG
SLADVVDTLKQKKLVELTKTEQDEPTCMERLLSKDWKEHVDRLNANELLGEVRGTPESLE
EKEHQLSTMIGQLISLREQLLSAHDEQKKMAASQLEKQRQQMELARQQQEQIARQQQQLL
QQQHKINILQQQIQVQGHMAPLMIPVFPHDQRSLAAAAAAQQGFLFPPGMSYKPAGENYP
MQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQISPGSKMAPLPQAPNSSGPLSPSAMKS
EKRASSPVTHIKEEGSTQPLNLSARPKTTELLRSPTSPTHSLFSGNKTSPTGMGKGRIPS
PIANMGRNTSMDILSSLNSTALFGDQDAVMKAIQEARSMREQIQREQLHHHQQQQQQPGH
HSLEAKLSALSSMSLNNGNKERLHYETLSQHLGKLGEDAGKMVHRVIDLTRPEDLDGSNI
TEARVFREARGRSNAEPHIKRPMNAFMVWAKDERRKILQTFPDMHNSNISKILGSRWKAM
TNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIIDGKKLRIGEYKQMMRSRRQEMR
QFFVGPQPPIPLGNGPGGVGVYPGAITMATAATQSPHLTSDCSSNSASPEPAIPVIQSTY
GMKSEPGGGGSNGGRVRALDLPSDPTNGDDDMDMYEDFEDEPKSDYSSDHETREAVSAN
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttccatgcgagcaacgcctccctttcacgcaccatctgaggaagaggaagcg
atgggtcaggacaatgtggcctgggccagcgaggagcgagagggcccaaaggagacaccg
tctccctcttcgcatgaccgaccccacccggacgagctgcagccaatcagagagaagctg
acagatgctgagtgggagaacgtggtgcctgctgcgatggacaatgaaagcagtaaaggc
tgctcagtctactcctaccggactaactctacctctccacccaagccagaggagtgttcc
agggatcgcggggatccaatgatcagcctcgccttcgggacgccggagcgccgcaaagga
agcctggcagacgtggtggacacactgaaacagaagaaacttgtggagctgaccaagaca
gaacaagacgaaccgacttgtatggagaggcttctctccaaagattggaaggagcacgtt
gaccgcctgaacgccaacgaactgctgggggaagtcagaggtacaccagagtcgctggag
gagaaggagcaccaactttccactatgattggtcagctgatcagtctgagggagcagctc
ctctcggcccacgatgagcagaaaaagatggccgcctcacagctggagaagcagagacaa
cagatggagctggccaggcagcagcaggagcagattgccagacaacagcagcagctcctg
cagcagcagcacaagataaatattctccaacaacagatccaggtccagggtcacatggct
cctctgatgatcccagtgtttcctcacgaccagcggtctctggctgctgccgctgctgca
cagcagggcttcctctttccaccgggcatgtcctacaagccagcaggtgagaattacccc
atgcagtttattccatctacaatggcagctgcagcggcgtctggactcagcccgttacaa
ctacagcagctgtatgccgcccaactggcaagcatgcagatctcaccaggatccaagatg
gctcccctcccacaggctcccaactcctccggtcccctttccccctccgccatgaagagc
gagaagcgagcatccagtcctgtcactcacattaaggaggaaggatccacacagccattg
aacctctcagccagacctaagacaactgagctgcttcgctccccgacgtccccgacgcat
agtctgttctctgggaacaagaccagccctacaggcatgggcaagggccgcatcccaagc
cccatcgccaacatgggcaggaacacctctatggacatcctgtccagcctcaactccaca
gcgttgtttggggaccaggatgcggtgatgaaggccatccaagaggccaggagcatgagg
gagcagatccagagggagcagctccaccaccaccagcagcagcagcagcagccgggacac
cacagtctggaggccaaactgtcggctctcagcagcatgagcctcaacaatggcaacaag
gagcggctgcattatgagacgctgagccagcacctggggaagctcggggaggatgctggg
aagatggtccatcgagtcattgacctgacgagaccagaagatctggatgggagcaatatc
acagaggcgcgagtgttcagggaggcgcggggcaggagcaacgcagagccccacatcaag
aggcccatgaacgccttcatggtgtgggccaaagatgagaggagaaagatcctgcagacc
ttccctgacatgcacaactccaacatcagcaagattctaggctctcgctggaaagctatg
accaaccaggagaagcagccgtactatgaggagcaggcccgtttgagcaagatccatttg
gagaaatatcccaactacaagtacaagccgcggcccaagagaacctgcatcatcgacggc
aagaagctgcgcatcggagagtacaagcagatgatgcggtcacgacgtcaggagatgagg
cagttctttgtcgggcctcagccaccgattcctctcggcaacggccccggcggagttgga
gtttacccaggtgccataaccatggcaactgcagccacacaatccccacacctgacctca
gactgctcaagcaactcagccagccctgaacccgccatccctgtcattcagagcacgtac
gggatgaagtccgagcctggcggcggaggcagcaatggcggcagggtcagagccttggat
ctgcccagcgaccccaccaatggagacgacgacatggacatgtacgaggactttgaggac
gagcccaagtcagactatagcagtgaccacgagacacgagaggctgtcagtgccaactga
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