Sander lucioperca (pikeperch): 116047030
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Entry
116047030 CDS
T07345
Symbol
lft1
Name
(RefSeq) lefty1
KO
K04668
left-right determination factor
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116047030 (lft1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sluc04052
]
116047030 (lft1)
Cytokines and neuropeptides [BR:
sluc04052
]
Cytokines
Transforming growth factors (RSTK binding)
116047030 (lft1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
DUF5422
Motif
Other DBs
NCBI-GeneID:
116047030
NCBI-ProteinID:
XP_031151375
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All DBs
Position
9:complement(15881552..15884460)
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AA seq
358 aa
AA seq
DB search
MDFLRACVLCTALFGLAEAFTHQDMKDALLQKLGLDEVPKIHKRDLENLVIPAHIRNKYM
SMLKMHHSRRRRSLPSLAGILRGIPGNADISGEYVYSDTTRHRMVFEMEARVPENSEVTM
AELKLYQRASYHKRFAVERKSHRPVNNARVSVYWVEVLPNGSNRTSLVDSRLIPIHETGW
KSFDVTQAVHYWSKSQQKTPMHLEVWVEGERPGSYAAEMAKGVRFTTQEQTDNTLGKPEL
ILYTLNLEEYGSRGDCNLNQNKDACCREEYFINFRALTWTQYWIIEPAGYQAFRCTGGCK
QPKRNYGYGERRCTVSESAPLPIMYLVKKGDYTEIEVAEFPNMIVERCACTMDNISIV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctgcgcgcttgtgtcctttgcaccgctctcttcggtctcgccgaggctttt
acgcaccaggatatgaaggacgcgctgctgcagaaacttggcttggatgaagttcctaag
atccataaaagggatttggagaatctggttatcccggcgcatatcagaaataagtacatg
tccatgctgaagatgcaccacagcaggagacgcagatctctgcccagcctggccggcatc
ctgaggggaatccctggcaatgcagatatttccggggagtatgtgtattctgacaccact
cggcatcgcatggtgttcgaaatggaggcgagggttccggaaaacagcgaggtgaccatg
gcggagctgaagctctaccagcgggcttcctatcataagcgcttcgcggtggagaggaaa
agccaccgtcccgtcaacaacgcccgggtcagcgtctactgggtggaggtgctgccaaac
ggatccaaccgcacatcactggtagactcacggttgatccccattcacgagaccggctgg
aagagctttgatgtgacccaggcggtgcactattggtccaagagccagcagaagacacct
atgcacctggaggtgtgggtcgagggcgagagacctggcagctacgcggccgagatggcc
aagggtgtccgctttaccacccaggagcagacggacaacaccttgggaaagcccgagctc
atcctctacacacttaacctcgaagaatacggttctcgcggcgactgcaacctcaaccag
aacaaagacgcctgctgcagggaagagtacttcatcaacttccgcgctctcacctggacg
cagtactggatcatcgagccggcagggtaccaggcgttcaggtgcaccggcggctgcaag
cagcccaagcgcaactacggctacggggagaggcggtgtacggtgtctgagagcgccccg
ttacccatcatgtacctggtgaagaagggcgactatactgagatagaagtggcggaattc
cccaatatgattgtcgagaggtgtgcctgcaccatggacaacatctccatagtatga
DBGET
integrated database retrieval system