Sander lucioperca (pikeperch): 116047084
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Entry
116047084 CDS
T07345
Symbol
cica
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116047084 (cica)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116047084 (cica)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
116047084
NCBI-ProteinID:
XP_031151448
LinkDB
All DBs
Position
14:complement(21260559..21297322)
Genome browser
AA seq
2534 aa
AA seq
DB search
MKPIKKQRRSPPSTRAKGGKRRGAGDAPEGGEKRDSDENRDRSRSPQNQTPSSSFSSNSH
SESSQMEPIRARDTSEVEGLHRDGLSEKTVSLAMDSGKFLTASDDRPGRLAVSGSSHSDS
GGSSCSNSSTPSANNSPNPASSRKTATFKARVPKKKYTSEHCMSATGNHSNPSSSTPPPL
PLSGGVINHGSTGSGSDIYVSHPDGNSQSRSMMDDFHSRTTGREGPQNGSSGPPTLSLGG
DRERPGGGEGVRDAEGVLPSPLPRCSSTDTASEHSADLEVVGDPHALTQMSTHAPPSLPD
ALSDALAKGLKNQRVLARQLRRRSDEEGGGERRDEGGISELVFRAGVVRKVSGDFGSLEV
QLNGEKTLCRYPYRHDSPPGVVDIVLDAPPPGVHPIAIGTRVCVPFGNEEGSEGQWYRQG
VVTQVDTHPAVANRYRVLLSEERQDVDEEEDGRGTAAGTQAVWVSRQTLRLLVPPWDLDL
PSGGGRDGEEGVRDKEREREDREEIDVEQEVCRLSCGMTPSVGTVLGRGIPYPGMVPVSS
TSGQNITSPVTPASVLSLAPGREWEIEKDLERERDLQRIQERERERERERENSAMQQHQQ
QQQQHHQYMPLTPEEDMEVSHFNMLPVGAIIPGAKPMALSQHRHIVSKPPPGYLNPHLSV
VRGIGIPGIPPTHLALKPHPPPSSVLLSLDPATAAAAAAGAVITTSQLPPLPPISSSTAS
SSRVEKASGGGSSSGGAGGGGGSGSGSTSSSSSRSRTPLTAAQQKYKKGDVVCTPTGIRK
KFNGKQWRRLCSREGCSKESQRRGYCSRHLSMRTKEMEASGGSRERGGASSTGTLTPSDL
RLSGGRASSEFDWDETSRESSEASSRGGDSRPRLVLPSLLPQDLSRFDFDECEAATMLVS
LGSSRSGTPSYSPISNQSPFSPTPSPSPSPLFGFRPANFSPITAPASLTPRRHRQLSGTK
MGTPGVERERHLSGIVPTFQTNLTFTVPMSPSKRKLDNHPPPPLPAIQDYQTKPEQQQLV
SIGGGLVGDPNLGHNNAAFRVLSPQSQPATPSSLSFPRPRSATSRPPSSAASTPPPMLVS
PTPPSPLPQEPSPRRIVPLRDSPVIVRNPDVPLAKFSDGPLGRRERSRSREHSQPQHTAP
PGLQVPVPINGATTNGAVLLRNPTSTLVLVTSSSSLTPATVGHAALSSPSMVPTSSGSIL
SSSGSGGRERERKPEGHQDASGGGLPQPVACHPTPTALLPLILPAESPHPAPRKQIIMGR
PGTVWTNVEPRSVPVFPWHSLVPFLEPSQSGAAAQPADGQQLVNQSKEPRCGVALVSDGR
TGPPDLERGSPSCPPPTNDNPPTDRGGADSETESDIDDPFSPGVANDPTPSDGPMKRRTQ
SLSALPKDGDRKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALG
PNEKQQYHDLAFQVKEAHFRAHPDWKWCNKDRRKSLSEGRGMPKEPRERSMSESIDPHPE
SQVLEGKGGGWPGGSERRGGLFVGQHPRPRAFSQSAVHTLEQRERERDLEKEDRAGLFRH
QGGASEDVTSDEERMVICEEEGDDDVMEDSCPEGSIDLKCKERVTDSDEDEPDGQHGFQP
MTRSSLPPSPPSVPHSNSTSAKGNGVGGGGEEGSERKRKRGADGGEEGSDGRSKREETSA
GIGEEGGGGGVSSLSVTGSTSSTQAPLALAPQGLTQVAGAVRVAPTVATNVVRSIVSTPV
EGAVTLSSLPQDKKAALLIGGGGPQQLPITAGGGYLSSSSSSSPGPVSVTPVGGSGLVTS
LVLGGSFPAVQPVQLLTPQPHAQTPLPVLQPQLHPTAAISSLTPPGFPKPLAQVQFVLPT
ESPSSPQLTQQQILSLPSNATLANGMHSGAGIRVASVSPGTRVRTGSTPPHPSISLVAPP
LPVQNGPATGNKIIQIAPMPVVQTSVHPSGAAAVHPGSPFPVSVATVMAPGVAPPQTVLL
TSPPTRITYVQSGPGVTTATPQQATPTPGPAYLPSSLATLGFTAIAPAGQTLVQPIVGAP
PLLAPAPPLSCQSQTPPGQASGTAGRQVLTAIYPAPTVTLPTGVVSVTTCDNVPPAVAAP
AQDAMNPPSPSAMGVQGSAGTTPQPNEAEEVELKVEVKRESLTDGQTDEGGQGWSSCAAS
SSLATCMINDTEVKKEEDSGLYIKEENFRDGYSREKGSDTDREQERGNKENGERKGGRET
QGGRETHREDHSMGDSSKEAGPRTPPPPPSGLDPPPPPPAEREPSSSSKKTKFRPPPLKK
TPDSLEKQRESGREATEKRKPWQNSALRVLSETYFEERFAELPEFNPEEVLPSPTLQSLA
TSPRAILGSYRRKRRNSSELELTAEDPSSPRRKTRRLSSCSSEPNTPKSAAKCEGEIFTF
DRAGTEGEDLGDLDRVPYSSLRRTLDQRRALVMQLFQEHGFFPSAQATAAFQARYSDTFP
TKVCLQLKIREVRQKIMQTATPGTFEPGVLGGLAEANPAPSHSSSFNQLAREDGESEQQG
DKGQSPEEPKSEGS
NT seq
7605 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgataaaaaagcagcggcgctctcctccctccacccgggccaaaggggggaag
cgccgcggagcgggggatgccccagaaggaggggagaagagagactcagatgagaacaga
gacagaagcagatccccacaaaaccaaacaccctcctcttcattttcttctaattcacat
tcagagtcctcccagatggaaccaatcagagcgagggacacttcagaggtggaggggctt
cacagagatgggctgtcagaaaagacggtatcacttgcgatggattctgggaaatttctg
acagcgtcagatgatagaccagggaggttagcagtgagcggcagcagccacagtgacagt
ggtggtagcagttgtagtaacagtagtacaccaagcgccaacaacagcccaaaccccgcc
tccagccgaaaaacagccaccttcaaggcccgtgttcccaaaaagaagtacacctctgaa
cactgcatgtctgctactggtaaccatagcaatccttcctccagcacgccccctcctcta
cctcttagtggtggggtcatcaaccacgggtcaacaggttcaggaagtgacatctatgtc
tcgcaccctgatggcaacagtcagagcaggagcatgatggacgacttccacagcaggacc
actggcagggaagggcctcagaatggctcctcaggaccccctaccctgtcgttgggaggg
gacagggaaaggcctggagggggtgaaggggtgagagatgcagagggagtgttgcccagt
cccctgccccgctgttcctcaacagacaccgccagtgagcactcagctgacctagaggta
gtcggcgacccacacgccctcacacagatgtctacacacgcaccacccagtctccctgat
gcactgtctgacgccctcgccaaagggctgaagaatcagcgtgtcctcgcccgccagctc
aggagaagaagtgacgaggagggagggggcgaaaggagggatgaaggggggatttcagag
ttggtgttccgggctggagtcgtccgcaaggtcagcggtgattttggtagcctggaggtg
cagctgaatggcgagaagacgctgtgccgttacccgtatcgacatgacagccccccaggg
gtggtggacattgtcctagatgccccgccgcctggtgtccatccaatagctattggcacc
cgtgtctgcgtaccatttggcaatgaggagggcagcgaaggccagtggtatcgacaaggt
gtggtgacccaggtggacacacaccctgcagtggccaaccgctaccgtgtcctcctgtct
gaggaaagacaggacgtggacgaggaagaggatggcagagggacagctgctggtacccag
gcagtgtgggtctcccgacaaacactccggcttctggtgccaccttgggacctggatctg
ccgtctggaggaggacgagatggagaagagggagtgagagacaaggaaagggagcgggag
gatagggaggagatagacgtggagcaggaggtgtgtcgtttgagctgcgggatgacaccc
agcgtggggacagtgttggggagaggaatcccctacccaggcatggttcctgtttcctcc
acatcaggacaaaatattacctccccagtaacaccagcgtcagtcctcagcctggcccca
ggccgagagtgggaaattgagaaagacttagagagggagagggacctccagagaatacag
gaaagagagagggaaagagagcgagaacgggagaacagtgcaatgcagcagcaccaacaa
caacagcagcaacaccaccagtacatgccactcacccccgaagaagacatggaggtgtcc
cactttaatatgctcccagtgggggcgatcatacctggggcaaaaccaatggcactttcc
caacaccgccacattgtctctaagcccccgcctggctacctcaatccccacctgtctgtg
gtgcggggcatcgggatccccgggatcccccctacccacctggccttgaaaccccatccc
cctccttcatctgttcttttaagccttgacccagcaaccgcagcagctgcagcagctggt
gctgtcattaccacctctcagctccctcctctccctcccatctcctcttctaccgcatcc
tcctccagagtagagaaggcctcaggaggaggttcttccagtggaggagcaggtggtggc
ggtggatccggatcaggttcaacctcctcctcctcgtcacgttcccgcaccccactgaca
gctgcccagcaaaagtacaagaagggagatgtggtgtgcacgccaacaggcatccgtaag
aagttcaatgggaagcagtggaggaggctgtgctccagggagggctgctctaaagagtcc
cagcgccgaggatactgctccagacacctctcaatgaggaccaaggagatggaagccagt
ggaggcagccgggaacggggcggagccagcagcacagggaccctgacgccgtctgacctc
cgactgagtggtgggagagctagctcagagtttgactgggatgagacgtcacgtgaaagc
agtgaggccagcagccgtggaggagactcccgcccccgcctggtccttccctctctgctc
ccccaagacctctctcgtttcgactttgatgagtgtgaggcagcgaccatgctggtctcc
ctggggagctcccgctcaggcacaccctcatactcccctatctccaaccagtcgcccttc
tcccctaccccatcaccctcaccctctccgctctttggctttcgccctgccaatttcagc
cccatcactgctcctgcctcgcttactccacgccgccatcgccagcttagcggcactaag
atgggtacaccaggtgttgagcgagagcgccacctgtcggggattgtgcccacttttcag
accaatctcactttcacagtccccatgagccccagcaagaggaagctcgacaatcacccg
cctcctccactgcctgcaatccaggactaccagaccaaacctgagcaacagcagctggtg
agcatagggggagggttggtgggagacccaaacctgggccacaataatgccgccttcaga
gtcctctccccccagagccagcccgcaaccccctcctcactttccttcccccggcctcgt
agcgccaccagcaggccaccatcctccgctgcttccacgcctccacccatgctggtctct
cccactcctccctccccgttgccccaagaaccctccccacgccgtattgtgcccttacgt
gattccccagtcattgtacgcaacccagatgtccctctggccaagttctctgatggtccg
ttagggaggagagagaggagcaggtccagagagcacagccagccccaacacacagctccc
ccaggtctgcaggtccccgtccccatcaacggggccaccaccaacggtgcagttctcttg
cgcaaccccacatccacacttgtcctggtcacctccagctcgtcactgaccccagccaca
gtgggccatgcagcattgtccagcccctccatggtgcccacttcatcgggctcaatcctg
tcctcctctggttctggaggcagggagcgtgagaggaaacctgagggacaccaagatgcc
tccggaggggggctgccacagccagtagcctgtcaccccacgccgactgccctgctgccg
ctcatactgccagccgagtcgccccaccctgctccacgcaagcaaatcatcatgggacgg
ccaggaactgtttggaccaacgtggagcctcggtcggtgccagtgttcccttggcattca
ctcgtccctttcctggagcccagccaatcaggagcggctgcccagcctgctgatggtcaa
cagcttgtcaatcagagcaaagagcctcgttgcggtgtggccctggtgagcgacgggcgg
accggcccaccagacctagagaggggatcgccgtcatgccctcccccgactaatgacaat
cctcctacagacaggggaggggctgacagcgagacagagagcgatatagatgacccgttc
tccccgggtgtggccaacgatccgacgccctctgatggccccatgaagagacgcacacag
tccctcagcgccctgcccaaggacggagacaggaagagggagaaggaccacatccgccga
cccatgaatgcattcatgatcttcagtaaacgccaccgggccctggtgcaccagcgacat
cccaaccaagacaaccggacagtgagcaagatcctgggggagtggtggtacgctctaggg
cccaacgagaagcagcagtaccacgatctggccttccaggtgaaagaggcccacttcaga
gcgcacccagactggaagtggtgcaacaaggaccgcagaaagtcgctgtcagagggccgc
gggatgccaaaggagccacgggagaggagcatgtcagagagcatagatccccatccggag
tctcaggtgctggaggggaagggaggaggctggccagggggatctgagcgtcgagggggg
ctgtttgtggggcagcacccccgtccccgagccttttcccagagtgctgtgcacaccctg
gagcagagggagagagagagagacttggagaaggaggacagggcgggtttgtttcgccac
cagggcggggccagcgaggacgtgaccagcgacgaagagcgcatggtcatctgtgaggaa
gagggggacgatgatgtcatggaggattcctgtcctgaaggctccattgacctcaagtgt
aaagagagagtgacggacagcgatgaggacgaaccagatggacagcatggcttccagcca
atgactcgctcctctctccctccttcccctccctccgtccctcactccaactccacctca
gctaaagggaacggagtaggagggggtggtgaagaggggtctgagaggaagagaaagaga
ggtgcagacggaggagaggaggggagcgatggaagatccaagagagaagaaacatcagca
ggtatcggagaagaaggtggaggaggtggtgtctcctctctgtccgtcacaggctcaaca
tccagcacccaggctcccctcgctttggccccgcagggtttgacccaggtcgccggcgcc
gtccgcgtggcccccactgtggcgaccaatgtagtacgatccatcgtcagcacgccagtg
gaaggggccgtcaccctcagctccctgcctcaggacaagaaagccgctctcctgattgga
ggaggtggacctcagcagctgccaatcaccgcagggggtgggtacctgtcctcctcctcc
tcctcctcccctggtccagtcagtgtaaccccagtggggggcagcggtctggtcactagc
ctagttctgggagggtcctttcccgctgtccaaccagtgcagctcctcaccccgcagccg
cacgcacaaacccccctacctgtcctccagccacagctccaccccactgccgccatctca
tctctcacacctcccggcttccccaagccgctagcgcaggtccagttcgtcctgcctact
gagagcccttcctcccctcaactcacccagcagcaaattctctccctgccctccaatgcc
accctggccaatggcatgcactcaggggcgggaatcagagttgcatcagtcagccccgga
accagagtgagaacagggtctactcctcctcatccttccatttccctagtcgcgccgcct
cttcctgtgcagaacggccccgcgacaggaaacaagatcatccagatcgctcccatgcct
gtggtccagaccagcgttcatcctagtggcgcagcagcagtgcatcctgggagccccttt
cctgtttccgtggcaacagtgatggctccaggtgtcgcgcccccacagaccgttcttctg
acctctccacccaccaggatcacctatgtccagtctggcccaggagttaccacagcaacg
ccccaacaggccacacccactccaggccctgcgtatctcccatcatccctggcaaccctg
ggcttcaccgccatcgccccggccgggcaaaccttggttcagccaattgttggtgcaccg
ccactgttggctccagccccgcccctgagctgtcaatcacagacccctccgggtcaggcc
tcgggaacggctggtcgtcaggtactaactgccatctaccctgcaccaaccgttactctg
cctactggcgtggtctctgtgacaacctgtgacaacgtgccgcctgcagtggccgctcca
gcccaggacgcgatgaaccctccctctccgtcggcgatgggggtgcagggttcagcgggg
acgacccctcagcctaacgaggcggaggaggtggagctgaaggtggaggtgaagagggag
agcctgacagatggtcagactgatgaaggaggacaggggtggtcgagctgtgctgccagc
tcctcattggccacctgtatgattaatgacacagaagtaaaaaaagaggaggacagcggt
ctgtacatcaaagaagaaaacttcagagatggatacagcagagagaaaggaagcgacacg
gacagagagcaagagagagggaacaaggagaacggtgaaagaaagggaggcagagagaca
cagggaggcagagagacacacagagaggaccacagcatgggcgacagcagcaaagaggct
ggacctcgcacccctcctccaccaccctcaggtttggacccccctccccctcctcctgcg
gaaagagagccctcttcttcctcaaagaagaccaagttcagaccaccaccgctcaaaaag
acacctgactctctcgaaaaacagcgggagagtggcagggaagccacagagaagagaaag
ccctggcagaactcagccctaagggtcttgtcggagacgtactttgaggagcgttttgcg
gagcttccagagtttaacccagaggaagtccttccttcgcccactctgcagagtctggcc
acctcaccaagagccatcctaggaagctaccgcaggaagagacgtaactcctccgagctg
gagctgacagcagaagaccccagctccccgaggaggaagacccgccgtctctccagctgc
agctcggagcccaacacccctaagagcgctgccaagtgtgagggagaaatcttcaccttc
gacagagcaggtacagaaggagaggatcttggagatttggaccgggtgccctactcgtct
ctgcgtagaactctggatcagcggcgggccctggtcatgcagctgtttcaggaacatggc
ttctttccctcagctcaagccactgctgccttccaggcacgctactcggacaccttcccc
accaaggtgtgtctgcagctgaagatccgcgaagtccgacagaagatcatgcagacggcc
acgcccggaacctttgagcctggagtgttaggagggttggctgaagccaaccccgccccg
tcccacagctcctctttcaatcaattagcccgggaggacggagagtcggagcagcaagga
gacaaaggccagagccctgaggagccaaaaagcgaaggatcataa
DBGET
integrated database retrieval system
