Sander lucioperca (pikeperch): 116047373
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Entry
116047373 CDS
T07345
Symbol
recql4
Name
(RefSeq) ATP-dependent DNA helicase Q4 isoform X1
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sluc03032
]
116047373 (recql4)
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116047373 (recql4)
Enzymes [BR:
sluc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
116047373 (recql4)
DNA replication proteins [BR:
sluc03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
116047373 (recql4)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
116047373 (recql4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Drc1-Sld2
zf-CCHC
zf-CCHC_3
ResIII
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
116047373
NCBI-ProteinID:
XP_031152004
LinkDB
All DBs
Position
16:14353971..14368052
Genome browser
AA seq
1597 aa
AA seq
DB search
MDRYNEVKLQLKSWEQGFVKDHQRKPNKEDIDQAPEETRKLYKEYRSLKQAKENSSSDAA
SGHAEQPRSTAEVITVQKDGDCWGAHLNRSSQPASSPRLTSEEKDSLKASAQYYGLKLKN
NLVTLSKERPVSLRKSVLPGRLPLNSLKDRQTGQTNSPVAATVKTTFTDPESSPFTPRKF
KTCLGSLASKTPQKVEPEEPFEPFEPVRESCEEPASAASSCSSTSKVISSENQNVSSVAP
SPARSSASLSSPCSVVGTSRGGVGATGKLNESIGASGDRKQHVEILVTPHKGISDADVGT
LISLRGSPRVLGGFRGGMGSRGIGVRASPASRLSFVDKNWLERCQVFGEMGAEVKPGAGN
QEINLEKEGERGRETEGKIQRDEKEEIDAEGESREAIDLGRDTGLKSITSDKTVSDSAPK
PSLQHTGKSSGGGKEKAKRKEGEEMERGLSPPLTPEDDTETSHKSKGTKKKGRKRQREEE
NVQGETEEGGVKKRRRNGKKKEESSDVNPSPAQVGGKKRRTKKKGDADAEEEKETKEPKK
VPQENLFGEIEEELAAKRMYHSQPVRARGMKATEGNFVKINLKKKSHVKGYALRGAGLRK
QMYMQKFQLKGERFGGAGGGFFGRGRRGGFRGGLSRQGDTCYKCGGTGHWAMDCKGRAPP
PPVPEDQPAEEELFELPTLEEVARATGTLQPQPLVAPLSITEEQPYQDKEADSNHKDEVL
LNVIRPDYERPAPPPPVEPLYYLTDDGKVQETPAEVYAALKDIGYQSFRPGQEEAIMRIL
SGLSTLVVLSTGMGKSLCYQLPAFLYAKRSKSITLVISPLVSLMDDQLSGLPANLKAACI
HSNMTMKQREAAIEKVKSGEVCVLLLSPEALVGGGGSGSGCLPSAQELPPVAFACIDEAH
CVSEWSHNFRPCYLRLCKVLRERLGVQCLLGLTATATLSTALDIARHLDITDEDGIAVRS
AAVPPNLHLSVSMDREKDQALVSLLKGDRFGCLDSIIVYCTRREETTRVAALLRTCLQGV
LVKENKHTNSSRRIQNNPVGQKKKELARKKIRKPLKWQAESYHAGLSASERRRVQNNFMC
GELRIVVATVAFGMGLDKSDVRGIIHYNMPKSFESYVQEIGRAGRDGDPAHCHLFLDPEG
ADLHELRRHIYADTVDYYTVKKLVQKVFPPCKCKQIHQRQQELVKDIEDSELLEMMDVCD
QENLNPPTQQDIVHTDTPVTAQESSHPDAAELPLHEGRDEGKEEEERKEEQTVEYEEADG
SMKHRNVEAKGAGDWLMDQEEERSQWPRERVCHTHERAIPIQETVEALDITEEGVETLLC
YLELHPQRFVELLHPTLSVCKASCYGGPRQLQKIIKICPPIAVVLARKRMAGERVETCDQ
LEFDVVEVADTMGWQLPLVKRGLRQLQWSSVGGRSGVHIEFSSLSFYFRSFGDLSDEEMD
RVCQFLHNRVQNQERTQLYQLTACFKAFKSVAFQSASSCLEDLDESRSLKLKDLLSEYFD
KRRDRSHMLAPVDIEELDKYKLLDWENQIRADIRSFLSNRSDEKFSGRAVARILHGIASP
CYPAQTYGRDRRYWRKYIQFDFNQLIKLATQEIIRFK
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atggatcgatacaacgaggtgaaactgcagctgaagagctgggagcaggggttcgtcaaa
gaccaccagaggaaaccaaacaaggaggacattgatcaagctccagaggagaccaggaag
ctgtataaagagtaccgcagtttgaaacaagccaaagaaaacagcagcagtgatgcagcc
agcggacatgctgaacagcccagatctacagctgaggtcataacagtccagaaggacggg
gactgttggggtgcccatctaaaccgcagttcacagccggcatcttctcccagactgaca
tcagaggaaaaagacagtcttaaggcctctgcccaatactatggactaaagcttaaaaac
aacctggtgacactcagtaaggaaagacctgtctcactgaggaaatcagtccttcccggt
cgattgcctctaaactccttgaaagatcgacaaactggacagacaaacagccctgttgct
gccactgtcaaaaccactttcactgaccctgaatccagcccttttacaccaagaaaattt
aagacttgcctgggatccctggcttcaaagacacctcagaaagtggagcctgaagagccg
tttgaaccatttgaacctgtcagagagtcttgtgaagagcctgcaagtgctgccagtagt
tgtagtagtactagtaaagttattagttcagaaaatcaaaatgtctcaagtgtagctccc
tctccagccagatcttctgcatcattatcttctccatgtagtgtagtaggaacttcaaga
ggaggtgtaggagccacaggaaagttaaatgaaagtataggagcttcaggagacagaaaa
caacatgttgaaattttagtaactccacataagggtattagtgatgcagatgttggaact
ttgattagcttgagaggaagccctcgggttcttggaggtttcagaggaggaatgggaagt
agaggcattggagtaagggcttcccctgccagcagactgagttttgtcgacaagaactgg
ctagagaggtgtcaggtgtttggagagatgggggctgaggtgaagcctggagcaggcaac
caggagataaatctggagaaagagggagaaagaggaagagaaacggaagggaaaatacaa
agagatgaaaaagaagaaatagatgcagagggagaaagcagagaggcaatagacttggga
agagatacagggcttaagagcattacaagtgacaaaacagtcagtgatagtgcaccgaaa
ccttctctacaacacactggaaaaagcagcggaggagggaaagaaaaagcgaaaaggaag
gaaggtgaggagatggaaagaggactgtcgccacctttaacgccagaagacgacacagag
accagtcacaaatccaaaggtacaaagaagaaagggaggaaaaggcagagggaggaagag
aacgtgcagggagagacagaggagggaggagtgaagaagagacgtaggaatggcaaaaag
aaagaggagagctctgatgtaaaccccagcccagctcaagtaggagggaagaaaaggaga
accaagaaaaagggagatgcagacgcagaagaagagaaagaaaccaaggaacccaaaaag
gtccctcaggagaacttgtttggtgaaatagaggaggaattggcagccaagagaatgtat
cacagtcagcctgtcagagccagaggcatgaaagccacagagggtaactttgtgaagata
aatctgaagaagaagtctcatgtcaaaggatacgcactcagaggtgctggtctacgcaaa
cagatgtacatgcagaagttccagctgaaaggcgagcggtttggtggagctggtggagga
ttttttggcagaggaaggaggggaggattcagaggggggctcagtcgccagggtgacacc
tgctacaagtgtggagggaccggacactgggccatggactgcaagggacgagcccctccc
cctcctgttcctgaggaccagcctgctgaggaggagctgtttgaactgcccaccctggag
gaggttgccagggcaacaggcacactgcaacctcagccactggtggcgcctctcagtatc
acagaggagcagccgtaccaagataaggaggcggacagtaaccataaagacgaggtgttg
ctgaatgtaatccgtcctgactatgagcgccctgctcctccaccaccagtggaaccactt
tattatctcacagacgatgggaaagtccaggaaacgcctgctgaggtgtacgcagctctg
aaagacatcggctaccagtcgtttagaccaggacaagaagaagccatcatgagaatcctg
tcaggtctctctaccctcgtagtgttgtcaacagggatgggtaaatcattgtgctatcag
ctcccagccttcctgtacgctaagcgatcaaaaagcatcactttggtcatttcacctcta
gtgtcactaatggacgatcagctgtctggcctgccagccaatctgaaggcagcctgtatc
cactccaacatgacaatgaaacagagagaagctgccatagaaaaggtgaagtcaggcgag
gtgtgtgtgttgctcctctctccagaggctctggttggtggaggcggttcagggtcaggg
tgtctgccctccgctcaggagctccctcctgtggccttcgcctgtatagacgaagctcat
tgtgtctcagagtggtcacacaactttagaccctgctacctgagactctgtaaggtacta
agggagcggttgggagtgcagtgcttgctgggactcacagctacggccacactgtccact
gctctggacattgcgcgacatctggacatcactgatgaagacggcattgcagttcgatct
gcagcagtgcctcctaacctgcatctgtccgtgtccatggatagagaaaaagatcaggct
ttagtgtccttgttgaaaggtgatcgttttggttgtctggactccatcatcgtctactgc
accagaagagaggagacaactcgtgtggcggcactgctccggacctgcctgcagggggta
ctggtgaaagaaaacaagcacaccaacagcagcagacggatacaaaacaaccctgtagga
cagaaaaagaaagagctggcaaggaagaagattcgtaaaccgctgaaatggcaggcggag
tcgtaccacgcgggcttgtcagcgtctgagcgccgtcgtgtccagaacaacttcatgtgc
ggggagctcagaatcgtggtggccactgtggcttttggcatgggcctcgataaatctgac
gtccgcggtatcatacactacaacatgcctaagagctttgagagctacgttcaggagatt
gggagggcaggaagagatggagacccagcacactgtcacctctttctggaccctgagggt
gccgacctccatgagctccgtcgccacatctatgcggacacagtggactactacacagta
aagaaactggtccagaaagtttttccgccatgcaaatgtaaacagatacaccagagacaa
caggaacttgtaaaggacattgaagattcggagcttctggaaatgatggatgtgtgtgat
caggagaacctaaaccctcccactcagcaggacatagtacatacagacacaccagtaacc
gcacaggagtcgtcccatcccgatgcagcggagctacccctccatgaaggtagagatgaa
ggaaaggaagaggaggagaggaaagaggagcagacagtcgaatacgaggaagctgacggt
tcgatgaagcacaggaacgtggaggcgaaaggagccggtgattggctaatggaccaggaa
gaggagcgcagtcaatggcccagagagcgagtgtgtcacacgcatgaaagagcgattccc
atccaagaaactgtggaggctctggacatcacagaggaaggtgtagaaacgctgctctgc
tatctggagctgcatcctcagcgctttgtcgaacttctccaccccacgctgtctgtgtgt
aaagccagctgctatggcggaccaagacagctgcagaaaatcattaaaatttgccctccg
attgctgtggtgttggccagaaagcggatggcgggcgagcgggtggagacgtgtgatcag
ctggagtttgatgtcgtcgaggttgcggacactatgggatggcagcttcctcttgtgaag
agaggactcagacagctgcagtggagcagtgttggcggacgtagcggtgtccacattgaa
ttctcctccttgtctttctacttccgttcctttggcgaccttagcgacgaggagatggac
agagtttgtcagttcctccacaatcgagtgcagaaccaagagagaacgcagctctaccag
ctgaccgcctgctttaaggccttcaaaagtgttgcgttccagagtgcatcgtcctgtctc
gaagatttggatgagagtcgcagcctgaagctaaaagaccttctctctgagtacttcgac
aagaggcgagaccgaagccacatgctcgcaccagtggacatcgaggagctcgacaaatat
aagttgttagactgggagaatcagattagagccgacatcagaagttttctttccaaccga
agcgatgagaagttctctggaagagctgttgctagaatcttgcacggcatagccagtcct
tgttatcctgctcaaacctacggcagggacagacgctactggaggaagtacatccagttt
gacttcaaccagctcatcaaactggccacccaggagatcattcgcttcaagtga
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