Sander lucioperca (pikeperch): 116047394
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Entry
116047394 CDS
T07345
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116047394
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
116047394
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_14
Ig_2
LRRNT
V-set
LRR_9
LRR_RPS2
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
116047394
NCBI-ProteinID:
XP_035849193
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Position
16:complement(17203279..17207582)
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AA seq
609 aa
AA seq
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MFEGIAVHQWLCWGTIYLLAAGVALSSETRWLCPKSCRCNTVLLEVNCSDGQLTTVPNGL
PQNPKLLNLTHNKIKTLVHQQFRTLTQLFDLDLSDNIIVIIEVEAFLGLQSLITLRLARN
HLKIIPVGVFAGLPKLKLLDISSNEILVFLDFTFRDLTSLQFIKAADNDLVFISHQAFTG
LTSLQELRLDGCNLTAVPTEALTQLGNLKSLHFYRMGITTLPNYSFRHLERLKELLISHC
RWLENLSGNSLFGLNLTSLTIRHCNLSVVPYISLHHLVYLVYLDLSFNPITYIHENLFGD
LLRLQELHLVGGSLLRIEIGAFKGLAHFKLLNVSRNFLTTLEVGAFHSVDVLRTLGLDNN
PLACDCRLLWVVQRRLYLDFGGNPPTCTTSVQLQGWYFLDFTEAELPSLLTCRQPSILNP
KPQEVRVDQGQTVVFYCNAEGDPLPSVTWISPQLKPLSPIGRIRALSNGSLEVRYAQPQD
SGAYLCVASNAAGNDSLLVSIHVRAFPSSSKNPFHLKGWFAFPSASPGVNGNQNIPLDVK
TLLVAITIGLISFFSSVSVCFIFMFFWSKSKGQIKHTATIAYVPRSAVSSSNGGKGNYMD
TSRFTMKLI
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggggattgccgtccaccaatggctgtgctggggaactatctacctgttggca
gcgggggtggcattatcatctgaaacacgctggctgtgtccaaagtcctgccgctgcaac
accgtgctgctggaggtgaactgctctgatggccaacttaccacagtgcccaacggtctc
ccacaaaaccctaaactactaaacctaacacataataagatcaagactctggtgcaccag
cagttccggactttgacgcaactttttgatttggatttaagtgacaatattatagtaata
attgaagtggaagcctttctcggcttgcaaagtctgataactctgcgtcttgcccgcaac
cacctgaagattattcctgtcggagtgtttgctggtttgccaaaactgaagttactggac
ataagcagcaatgagatccttgtttttctagattttaccttccgtgacttaacttccctg
cagttcattaaagcagcagataatgacttagtttttatttctcatcaagcttttacaggc
ttaaccagtctgcaagagctgcgccttgatggctgcaacctcactgctgtgccaacagag
gcactcacacagctcgggaacctgaaaagtcttcatttttaccgaatgggcatcaccaca
ctgccaaactactcttttcgtcacctagagcgtctgaaggaacttctcattagtcactgc
cgctggctggagaacctgtcaggaaacagtctctttggcctaaatcttacatccctaacc
attagacactgtaacctcagtgttgtcccctacatctctttgcatcatcttgtatatctt
gtataccttgacctttcttttaacccaatcacctacattcatgaaaacctgtttggagac
ttgctccggctccaagagctccatctggtggggggatcattgctacggatcgaaatcgga
gcattcaagggtttggcacatttcaaattgctgaatgtatctagaaactttctcaccaca
ctcgaggtaggagctttccattcggtggacgtcctaagaactctgggacttgataacaac
ccactagcatgcgactgccgtctgctgtgggtggtgcaaaggcgactctatctggacttt
ggtggaaatccaccgacttgcactacctccgtccagttgcagggatggtattttctagac
tttactgaagctgagctcccaagcctgctcacatgtcggcagcctagtattctaaaccct
aaacctcaagaagtgagagtagatcaaggacaaacagttgtgttttattgcaatgcagaa
ggtgaccctctgccatctgtcacctggataagcccgcagctaaaacctctgtcacctatt
ggtagaatacgggctctctctaatggctcgctggaggttcgctatgctcaacctcaagac
agtggtgcttatctctgtgtggcatctaatgcggcaggaaatgacagcctgctcgtcagc
attcatgtccgagcctttccatcatcttctaaaaacccctttcatcttaaaggttggttt
gcctttccatctgcctctccaggtgtgaatggaaatcagaatatcccattagatgtcaag
acgttactggtagctataaccattggattgatttcatttttcagctctgtgagcgtttgt
ttcatcttcatgtttttctggagtaagagtaaagggcaaataaagcacacagccacaata
gcatacgtgccacgaagcgctgtgtcaagtagtaatggagggaaaggcaactatatggac
acaagcaggttcaccatgaaactaatatga
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