Sander lucioperca (pikeperch): 116047428
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Entry
116047428 CDS
T07345
Symbol
atxn1a
Name
(RefSeq) ataxin-1a
KO
K23616
ataxin 1/1L
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116047428 (atxn1a)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
116047428
NCBI-ProteinID:
XP_031152107
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Position
16:complement(17873065..17963624)
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AA seq
815 aa
AA seq
DB search
MKSNQERSNECLPPKKREIPSSTLPSDIRSPILPPASDSQRTENMAWLASVAGGNESGMG
RHHSSSQSDSLQYKSLFSTSDSSSSSSSLRLVSSLPTVYTSPLSQSTVGGTVHYAQLPPN
LQFIAPYAGYISPQLLPPPPPPPPLSSSSSSLAAQRQSHTETASAPSHASKHDQQRASTG
RTSMPPPSTDPAPHHVQMSTSTRTVPSPHYQGGIHLPPQSLHPHHTLGHGMSQLVVQYTD
APTRKEEVGSRPRELHNGELERGRRFGASPESNLSKPGSKSRDATSSLSSYEGRQLVLHS
DFSTHDHSGLRTSFMLMPNSHGDHQLVPPRASPENQTTSAHLEKGGIILGKPVNRTSSSS
NITSSFTFPPPLSVDSLKAAVSTLSPQTVIQTTHSATEALSMGLPSTSIYHQPPIIGYIA
GGGGSQHTPISYHTSLQQHLLIPGAQPVIIPVSGGGVTTLEPVTSHITSSTQAAPFPTTL
PHTYIAATAPKGESREAPSSSYHQAASGAVVHAQLHLPIVSAPPGLVAPSAPPPLSSTVA
PPSLPPYFIKGSIIQLADGELKRVEDLKTEDFIQSAEISTELKIDSSTVERIEGSHTSPN
FAVVQFSVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPDQTTQLLELPCTKLSVGDVCISL
TLKNLRNGSLKKTQPLELATPASVPASSYGHLKPPRAVPDTPQSCSGGGSRHNERENGIS
HRGRGGSGNRSGGGTNVENGDLVFGGRGSVSKGQVASSAEAGVTKPSGRRKRRWSAPEGR
KVERSEEEPPLTLPKPSFISHEVKVSIEGRSSIGK
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccaggaacgcagcaatgaatgtctgcccccaaagaagagggagatcccc
tccagcacattaccatctgacattcgctcacctatcctcccacctgccagtgacagccag
cgcacagagaacatggcctggcttgccagtgtggctggtggaaatgagagtggcatgggt
agacaccatagctccagtcagtctgacagcctccagtataaatccctcttttccacatca
gactcttcatcctcctcttcctcgttgaggctagtctcatctcttcctaccgtgtatacg
tcccccctgtcacagtccacagttggaggaactgtccattacgcccaactgcctcccaac
ctgcagttcatagccccatacgcaggctatatctcccctcaactgcttccacctcctcct
ccacctccccccctctcctcctcatcctcctctttggccgcacagagacagtcacacaca
gagacagcctctgctccgtcacacgcctccaaacatgaccagcagagagcatccactggg
cgtacctccatgcctccgccttctacagaccccgcccctcaccacgttcaaatgtcaacc
tcaacacggactgtgccgtcacctcattaccaaggaggcattcaccttcctccccagtct
ctgcacccccaccatactttgggacatgggatgtcccagcttgtggttcagtatacggac
gcacccactaggaaagaagaagttggctccagacccagagagctccacaatggagagctg
gaaaggggtcggcggtttggcgcgtcccctgagtccaacctctctaagccagggagcaaa
tcacgggatgccacttcgtctttgtcctcctacgagggccgccagctggttctgcactca
gacttctctactcacgatcactcagggctgagaacctctttcatgctaatgcccaacagc
catggggaccaccagctggtaccacccagagccagccctgagaatcagacaacctctgca
cacctggagaaaggcggcatcatcctgggcaagcctgtcaatcgcacatcctcctcctcc
aacatcacctcctctttcacgtttccaccaccattaagtgtcgacagcctgaaagctgct
gtcagcacactgtcaccccagaccgttatccagactacccacagcgctacagaggcactg
tcgatggggctcccctccaccagtatctaccatcagccacctatcattggttacatcgca
gggggtggtgggagccagcatacgccaattagctaccacaccagcctacaacaacactta
ctcattcctggcgcccaaccagtcattatccctgttagtggagggggagtcaccacattg
gaacctgtaacttcccacataacatcatctacccaagccgcaccgtttcctaccacactc
ccacacacatacattgctgccactgctcccaaaggagaaagtcgagaagcccccagcagc
tcatatcaccaggccgcttcaggtgcggtggtccatgcccagcttcatctccccattgtt
tccgctccgccaggactagtcgctccttctgctcctccccccttatccagtacagtggcg
cccccctctctccccccatatttcatcaagggctccatcatccagctggcagatggggag
ctgaaacgcgtggaggacctgaagacagaggacttcatccagagtgctgagatcagcacc
gagctgaagatcgactcgtccacagtggagcgcattgaagggagccacacctcacccaac
ttcgctgtggttcagttctctgttggtgagcaccgtgcacaggtgagtgtggaagtcttg
gtggagtaccccttctttgtcttcggccaaggctggtcttcatgctgcccagaccagacc
acccagcttctggagctgccttgcaccaagctctctgtgggcgatgtgtgcatttcactc
accctcaagaacctgaggaacggatccctaaagaagactcagcccctggagttggccacc
cctgcctctgtcccagcatccagctacgggcacctcaaaccccccagagctgtcccagac
actccccaaagctgcagtggaggaggctccaggcacaacgagcgggagaatggcatcagc
catcgagggaggggtggaagtgggaatagaagtggaggaggcaccaatgtggaaaacggg
gatctcgtgtttgggggaagagggtcagtttctaaaggtcaggttgccagcagcgctgaa
gctggcgtcactaagccatcaggacgaaggaagcggagatggtctgcccctgaaggacga
aaagtagaaagatccgaggaggagccgcccttgaccctgcccaaaccttccttcatctct
catgaggtgaaagtcagcatcgagggaaggtcaagtattggcaagtga
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