Sander lucioperca (pikeperch): 116047462
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Entry
116047462 CDS
T07345
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03013
Nucleocytoplasmic transport
sluc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116047462 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116047462 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116047462 (nup153)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116047462 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
116047462
NCBI-ProteinID:
XP_031152160
Ensembl:
ENSSLUG00000003012
UniProt:
A0A8D0CRV4
LinkDB
All DBs
Position
16:18481579..18500822
Genome browser
AA seq
1517 aa
AA seq
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MTAIRRRRNTDRHSDEKAMAATGGGKIRSRRYHIASKPYAKSKQQQSGLISRVTDTVKSI
VPSWLQKYFKNEDAPEEGGAVLGTEQNCQPPPPPNGSEEGPLPLDGRDSPEPSTSNAEPS
TSRASLNFQEYVLSRPPLSRSHLHFPPLDASSPTLGASSSLFSQPSTSSAPGPFSTGFSL
VKEIKDNLSQHEDDNISTTSGFSSRASDKDVPTSKTASLPQLWSPEMDRTHSGPQHAQSS
LKRPAFNLSVFGTSSNSSLNSTVLNSSQLGDSPFYPGKTMYGGAAAVRSSRARPGTPYQA
PVRRQIKAKPAGAQPCGVTSATARRILQSLERMSSPLADARRIPAAAASSPLSPLMDGTN
LDVSPFQSKKKRMDSTLPPVQRLVVPAAVSVSGNRSVSFRPTLTPGGVSRTLDRTPKDTP
TRQSPQLPEATPGPSRSTMDSSSPAYPLSSTPAASSVSSGGGKMKRERTTTRPSSKHPEE
EEVSEVLDLPTISLPISTSALPTFSFSTLFPPLTTSTTISTAPYLTPVTPAKETVTNKEP
PTTSTPLCAPYTFSSPIVKATAASPPSFSPSAGFTFSAPVAKLAPSMSNGKLASPIVAAV
KSVDSKSTGDFEGPFKPAKTLKQGSVLDLLKAPGFASPVRTSPGPDNTLLQISTQSTAPS
STTSTTSSLSSTVFGNAFKAPPGWSCDDCMVQNKPSDTKCVCCTAPQPNISSCKSMDSKP
SATTSVGLESSSSMNTASTTTTTAGFGTMFSKPAGTWDCDTCLVLNKPEAVKCVACETAK
PGTGLKPSLTLPSAFSAVKTVFTAPLSTGFIGFGDKFKKPEGAWECDTCLVENKAEDTKC
VACMSAKPGASAGASSASSAPVFGLGDAFKKPEGAWDCDVCLVQNKAVDVQCVACQAAKP
GSSVEPKAFGSSFVSSAGGTSGSSSGGFKFGTSDSTSVSGFKFGGSLTESSSSGGFKFGV
PFGSSSSETTSKDFTASSGFKFGSSSEGFKFGAASSDDKKSDEPATGSGFKFGASGGIAF
GTGSSSTENNSPKGGFTFGLSKPEEKTSDPTSSSVSVTPSASSQEKSDNAASSNDTTSTN
TNSTITTTTTTTGSVFGRLGERSLAATTPQGGSTFGSLQADKEPAAPTFTFGKPEEKKEA
TASSAQSAFLFGAANKDAEAAPAASGGFSFSKPSAPTEQPPPAYNFGKPADKSETSSAEA
PTGPSFTFGQSATDSSAAPKPAFSFMAGNPTNTVNSTSSSSTTLTPSLFGSSSSTQAPAP
SAAPSNFMFGQPAATANDAPPAKAFVFGQSQDSQPAAPSAAPLNSTPAPSQPFLFGAPAS
AAAPPPAAAPSFGFGAAAAAPAAAAAAAAAASSAPSAAPSPFAFSSASSGGFGANQAPSF
GSSFGSPFTATPSQPPAFGAKPNAAPVFGQQTNSTPVFGAAANSAPGGGFQFGGASAFGA
TNNASGGVFTFGAGSAASPAPPANPSIAPQSGPPGGGFNFSQPPAFNMGSAKSFTASPAG
QQAIAGRKIKTAVRRRK
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgacagctatccggcggcgccgaaacaccgatagacactcagacgaaaaagccatggcg
gccacgggtggagggaaaattagaagcaggagatatcatatcgcctctaaaccttacgcc
aagagtaaacagcagcagtcaggcctcatcagtcgagtgacagacacggtaaagagcatc
gttccttcctggctgcaaaaatatttcaagaatgaagatgctcctgaagaaggaggggct
gttctggggacagagcagaactgccagccacctcctcctcctaatggcagcgaagaggga
cctcttcccctcgatggacgtgactccccagagccaagcaccagtaacgcagagccctca
accagccgggcatcgttgaactttcaggagtatgtgctatctcgacctcctctgagtcgt
tctcacctccactttcctccgctggatgcatcctcgccaaccctgggggcctccagcagc
ctcttctcccaaccatccacctcctcagcccctggacccttttccacaggcttctctttg
gtcaaagaaatcaaagataacctctctcagcacgaagatgataacatctccaccactagc
ggcttttcctcccgtgcctcagacaaagatgtccctacttccaaaacggcatcacttccc
caactttggtccccagagatggacagaacacactctgggcctcaacatgcccaatccagt
ctgaaaaggcctgctttcaacctgtctgtatttggaacttcctccaattcatcattaaac
agcacagtgctaaactccagccagctcggagattcacccttctaccctgggaagaccatg
tatggtggagctgctgcggtcaggagctctcgtgctcgtcctggaacaccataccaggcc
ccagtaaggagacagatcaaggccaagcctgctggtgctcagccctgtggggtgacgagt
gccacagccagacgcatccttcagtccttggagcgcatgtcaagcccactggctgatgcc
aggagaatcccagcagcagctgcctcctcccccctgtcaccattaatggatggcacaaat
ctagatgtttcacctttccagtcgaaaaaaaaacgtatggattccaccctcccaccggtg
cagaggctggtggttcctgctgcagtgtcggtctcaggaaaccgctctgtctccttcaga
ccgacgttgactcctgggggagtgagccgaactctggacaggaccccaaaagacacgccc
acaaggcaatcaccgcaactacctgaagcaaccccaggtccatctcgaagcacaatggat
tccagtagcccagcctatcctctgtccagcacgcctgcagccagcagcgtgagctctgga
gggggcaagatgaagagagagaggaccactacacggccttcctctaaacaccctgaggag
gaggaggtgtctgaggtactggacctaccaaccatttcacttcccatcagcacctctgcc
ttgcccaccttcagcttctccaccctttttccacctctcaccacctccaccaccatcagc
acggccccctatctcacacctgtgactcccgctaaggaaacagtcacaaataaggagcca
ccaacgacctcgacacccctctgtgcaccgtatacattttcctcccctattgtcaaagca
actgctgctagtcctccttccttttccccctcagctggattcacatttagtgcacctgta
gcaaagttagctccctccatgtcaaatgggaagctggcctctccaatagtggctgcagtg
aagtcagtagatagcaaaagcacaggagattttgaaggacccttcaaaccagccaagacc
ctgaagcagggcagtgtgctggatcttctcaaagcacctggctttgcctctcctgttcgg
acttcccctggcccagacaacactctcctgcagatctccacacaatccacagccccctcc
tccaccacctcaaccacctcctccctctcttcaaccgtgtttggcaatgcattcaaagcc
ccgccaggctggagctgtgatgactgcatggtgcagaacaagccatcagacaccaagtgt
gtttgttgtacagccccacagcccaatatctcctcttgcaagtctatggacagtaaacct
tcagccaccacctcggttgggctagagagcagcagcagcatgaacaccgcctccaccact
acaaccactgcaggttttggcacaatgttttccaaacctgcaggaacttgggactgtgac
acatgtcttgttctaaacaaacctgaagcagtaaagtgtgtggcctgcgaaacggccaaa
cctgggacagggcttaaaccctcactgactcttccttctgccttctcagctgttaagact
gtattcacagcccccctttctacagggttcattggatttggagacaagttcaaaaaacct
gagggtgcatgggaatgtgatacatgtttggtagaaaataaggcagaggacacaaagtgt
gtggcctgcatgagtgctaaaccaggagcttcagctggagcctcttcagctagcagtgct
ccagtgtttgggttgggagacgcattcaagaagcccgagggcgcctgggattgtgatgtc
tgtcttgtacagaataaggctgttgatgtacagtgtgttgcctgtcaggcagccaaacct
ggatctagcgtggagcccaaagcttttggttcgtcttttgtttcatcagctggtgggact
tctggctctagttctggaggttttaagtttggcacatcagacagtacgtctgtatctggt
ttcaagtttggaggctcattgacagagtcctcatcgtcaggtggattcaaatttggagtc
ccatttggtagctcctcctcagaaacaacttctaaagactttactgcctcatcagggttc
aaattcggcagctcatctgagggctttaaatttggggctgcctctagtgatgacaaaaag
tcagatgaacctgccacaggttctgggtttaagtttggagccagcggtgggatagcattt
ggaactggatcatctagcacagaaaataactcccctaagggtggcttcacttttggactg
tcaaaaccagaagagaaaacatcagaccccacttcatcctccgttagtgtcactccttct
gcttcctctcaagagaaaagtgacaatgcagcatcatcaaatgacaccacatccaccaac
accaactccaccatcaccaccacaactaccaccactgggtctgtatttgggagattgggc
gagcgaagtttggcagccacaacaccgcaaggtggctctacgtttggatccttacaggca
gacaaagagccagctgctcccacatttacctttgggaagccagaggaaaagaaggaagcc
actgcctcctcggctcagtctgccttcctctttggtgctgctaataaagatgcagaagct
gcaccggccgcctcaggaggcttttccttcagcaagcccagtgctccaacagaacaacct
ccacctgcgtataattttggcaagccagcagacaagagtgaaacgtctagtgctgaggcc
ccgacagggccctcttttacctttggacaaagtgctacagattcttctgctgctccaaaa
cccgcattttcctttatggctggtaatcccaccaacaccgtcaactccacctcctcgtca
tccaccaccctgacacccagtctgttcggcagcagcagctccactcaggctcctgctcct
tctgcagctcctagcaatttcatgttcggtcagcctgctgcaaccgcaaatgatgctcct
ccagctaaagccttcgtcttcggccagagtcaggacagccagccggctgccccgtcagct
gctcctctgaactctactccagccccatctcagcccttcctctttggtgctcctgccagt
gctgctgctcctcctccagctgctgctccatcatttggctttggagcagcagcagcagct
cctgctgctgctgctgctgctgccgccgccgcctcttcagctccatctgcagctccctct
ccatttgcattcagctcggcctcctctggtggattcggggccaaccaggctccttcattc
ggttcatcctttggatcccccttcacagccacaccttcccagcccccagcattcggagcc
aaacccaatgccgcccctgtctttggacagcaaaccaactccacacctgtattcggggca
gctgctaattctgcaccaggtggaggctttcagtttggaggagccagtgcatttggagcc
acaaacaacgcctcaggaggagtgtttacttttggagcgggatcagcagcttctcctgcc
cccccagccaacccctccatcgcaccccagtcaggaccgcctggaggtggattcaacttt
tcacaaccccccgcattcaatatggggtcagcgaagtccttcaccgcctctcctgctgga
cagcaagcgattgctgggcgaaagatcaagactgcagtgcgacgcagaaagtag
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