Sander lucioperca (pikeperch): 116047540
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Entry
116047540 CDS
T07345
Symbol
ncam1b
Name
(RefSeq) neural cell adhesion molecule 1b isoform X1
KO
K06491
neural cell adhesion molecule
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
sluc04514
Cell adhesion molecule (CAM) interaction
sluc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
116047540 (ncam1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116047540 (ncam1b)
04517 IgSF CAM signaling
116047540 (ncam1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116047540 (ncam1b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sluc04515
]
116047540 (ncam1b)
04090 CD molecules [BR:
sluc04090
]
116047540 (ncam1b)
00536 Glycosaminoglycan binding proteins [BR:
sluc00536
]
116047540 (ncam1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sluc00537
]
116047540 (ncam1b)
04091 Lectins [BR:
sluc04091
]
116047540 (ncam1b)
Membrane trafficking [BR:
sluc04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
116047540 (ncam1b)
Cell adhesion molecules [BR:
sluc04515
]
Immunoglobulin superfamily
NCAM1/2
116047540 (ncam1b)
CD molecules [BR:
sluc04090
]
Proteins
116047540 (ncam1b)
Glycosaminoglycan binding proteins [BR:
sluc00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
116047540 (ncam1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sluc00537
]
Others
116047540 (ncam1b)
Lectins [BR:
sluc04091
]
I-type lectins (Siglecs)
116047540 (ncam1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
V-set
VEGFR1-3_N_Ig-like
V-set_CD47
Pur_ac_phosph_N
C2-set_2
Ig_PDGFR_d4
Fn3_ROS1
C1-set
C2-set_3
C2-set
DUF4959
Motif
Other DBs
NCBI-GeneID:
116047540
NCBI-ProteinID:
XP_031152233
Ensembl:
ENSSLUG00000016930
LinkDB
All DBs
Position
5:8956234..9069877
Genome browser
AA seq
1245 aa
AA seq
DB search
MVQLKDIFLALLLVGYTVSLEVEITPSHGEISLGESKFFMCEADAAARHIDWFGPSGDRI
EPNRPDITVTRNDDSSSTLTLYKAGTENAGTYKCVASNGDQQAESTVKVKIFQKITFTNA
PSPQEFSEGDNANIVCDVISSPPPTVFWKYKGAKIQMEKDVRFKVLSNNHLQIRGIKKTD
EGSYTCEGRLMARGEIDLRVIKVVVNVLPTIRVWQSEVNATADVGQAAMLTCAVDGYPEP
MVTWTRNGVVLEAGEKYSFNDDGSEMTLMDVAKLDEGEYTCIAKNKAGESEQELSLRVFV
KPKITYIENQSTSEMEDQVTLTCEALGDPTPTISWSSGERVFTEGEQAHLNRIYQASWTR
PEQHKSLDGSVVVRSDARVSSLTLKYVKYTDAGQYLCSARSAIGEDDQPAYLEVRYAPKI
NGAVAVYTWEGNAVNISCEVKAHPSDVSIVWLRDALQLPNSNTTNIKIFRSSSASYLQIT
PESENDFGSYNCTASNEMGTESKEFLLIQAEVPSAPSVSEVRPFSTTAQIQFEEPESTGG
VAVLKYRAEWRTQGRGSWVQRVYEVQDGYTSEVTITGLKPETSYELKLSAINGKGEGESS
PAEFFKTEPVRYTYNNGIYNFFTEDTEGNPNPPKLEGALQPKGNSLKISWIKQDDGGSPI
LHYLIRYKPIQVSEWKPEIRLPSGSDYVVLSGLEWDTEYNVYVVAENQKGKSQPATMSFR
TSTEPEAIQDLGEEAAFSMGVMLWVGILVVAFVFLLLAVDVTCFFVNKCGLIMCLCGKSG
TGTKGHNLEEGKAAFMKDESKEPIVEVRTEDECTANHNAAGPTEPNETTPLTEPELAAYT
AALALDTLSSVATNSDTATATIDPAQDSPSSETTTLTCSLSTPANDPSPTPVLAPAPTPE
SNTAPPTPLSFTSADEAKMAPLVEQRGSITPEEQEKLTTPPSTPEWTKAKKSGTPIPPKR
RHSPKLAALNAKGSPPVSPLAASSSSSSPNLDTKKPAPRPPVNKLPIQPHIVDSDTETPA
QTTATLATTAPPKPDRDSKTPDPSGCGLTAFDTNNRPADKTVDNNTDKDAPTSSPSVIHS
APKVPEAEESAPLVADVPSPLPVTPIPSSPAPATVEAPVSNDLLTSPPDAYNLQTCDVGP
KSADLELELTNGTKRPSWTPADLISLESPPSAPSLPNGDRGDLPPSGPVLEASETLAKTA
PPVNDEMIFSDEKGKLEEADLSNVLTEITAEHNSVIQTKTTESKA
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggtccagttaaaggatatttttctagccttgcttcttgtgggctacacagtttcactg
gaagtggagatcacaccaagtcacggtgagattagtcttggagagtccaaattcttcatg
tgtgaagccgatgctgctgccaggcacatagactggtttggaccgagtggggacaggata
gaacccaacagaccagacataacagtaacccgtaacgatgattcatcttccaccctcaca
ctgtataaagctgggactgaaaatgcagggacatacaaatgtgtcgctagcaatggagac
cagcaagcggagtcaaccgtcaaagtgaaaatcttccaaaaaatcacctttacaaacgca
ccctctccccaagagttttccgaaggagacaatgccaacattgtttgtgacgtcatcagt
tcgcctccacccactgtcttctggaaatataaaggagcaaaaatacagatggaaaaagat
gttcgctttaaggtactgagcaacaatcaccttcaaatccgtggcataaagaagaccgat
gagggctcctatacctgcgagggtcgcctcatggcccgcggcgagattgatctgcgggtc
atcaaggtcgtcgtgaacgtgctcccgaccatcagggtatggcagtccgaggtgaatgcc
acagcagatgttggccaggctgccatgttgacttgtgctgttgatggctatcctgaaccc
atggtgacatggacaaggaatggagtggttctcgaggcaggagagaagtacagctttaat
gatgatggctccgaaatgacattaatggatgttgccaagctggatgaaggagagtacacc
tgcattgccaaaaacaaggctggggaaagtgagcaggaactcagtctgagagtgtttgtc
aaacctaagatcacatacatcgaaaaccagagcacttcagagatggaggatcaggtaact
ctgacttgcgaggcgttaggagatccgactcccaccatcagctggagttctggtgagcgc
gtcttcaccgaaggagagcaggcacatctaaacaggatctatcaggcatcatggactcgg
cccgagcaacacaagagtctggatggaagtgtagtggtgaggagtgatgctcgtgtgtcc
tccctcactctgaagtatgtcaagtatacagacgcgggtcagtacctttgctcagcacgc
agtgccattggagaggatgatcagccagcatatctggaggtccgctatgcccctaagatc
aacggtgcagtggcagtgtacacctgggagggaaatgctgttaatatcagctgtgaggtc
aaggctcatcccagtgatgtatctattgtgtggctgagagatgcactgcagctccccaac
tcaaacaccaccaacattaagatcttcagaagctcatcagccagctacctgcagataacc
cctgagtctgaaaatgactttgggagctacaactgcaccgcttcgaatgagatgggcaca
gagtccaaggagttcctgctcattcaggccgaggtgccatcggctccatccgtcagcgag
gtgagacccttctccaccacggcacagatccagtttgaggagccagaatccaccggtggc
gttgctgttctcaaataccgagcggagtggaggactcagggcaggggcagctgggtgcaa
cgggtctatgaagtccaagatggctacaccagcgaggtgactatcacaggcctgaagccg
gagaccagctacgaactgaagttgtcagccatcaacggcaagggtgaaggtgaaagcagc
cctgcggagttcttcaagacagagcctgtccgctatacttacaacaacggcatttataat
tttttcactgaagacacagaagggaatcccaatcctcctaaactcgaaggggcacttcaa
cccaaaggcaactccctcaaaatcagctggatcaagcaggacgacggcggctcgcccatt
ttacattatcttatccgctataaaccaatacaggtgtcggagtggaaaccagaaatccga
ctgcccagcggcagcgactacgtggttctcagcgggttagagtgggacaccgagtacaat
gtctacgtggtggcagagaatcagaagggcaagtcccagccggctaccatgtccttcagg
acctccacagagccagaggccatccaagatttgggtgaagaggcagcgttctccatgggc
gtcatgctctgggtagggatccttgtcgtagcatttgtgttcctgctgctagctgtggat
gtcacctgtttctttgtcaacaaatgtggcctcatcatgtgcctctgcggtaaatcaggc
acagggaccaaagggcacaacttggaggagggcaaggcagccttcatgaaagatgagtcc
aaagagccaatagtggaagtcagaacagaggacgagtgcacagccaatcacaacgcagca
ggaccaaccgaacccaatgaaaccacgcctctcacagagccagagctggcggcttacact
gctgctctggcactggacaccctctcctccgtagccaccaactctgacacagccactgca
accattgaccccgctcaggacagcccctctagcgagaccactaccctcacttgtagcctg
tctaccccggccaacgacccctcacccacccctgtcctggccccagccccgactccagag
tcaaacactgccccgccgactcccctcagcttcacctcagccgacgaagctaaaatggcc
ccgttagtagaacaaagaggaagtatcaccccagaagaacaggagaaactaaccactcct
cctagtacccccgaatggactaaagctaaaaagtctgggacacccataccaccgaagcgt
agacactctcctaaactcgccgcgctgaatgctaaaggtagcccgcctgtatctccactg
gctgcgtcttcctcatcgtcctctcccaatctcgacaccaagaaaccggccccgaggcca
ccggtcaataagcttcccatacagccacacattgtagactcagacaccgagacgccagca
caaacgaccgccactctagcaaccactgcccctccaaaaccagaccgtgattcaaagacc
ccagatcctagtgggtgtggccttactgcctttgacactaataatagacccgctgacaaa
acggttgataataacactgacaaagatgctccaactagttctccttcagtgatccacagt
gctcctaaagtcccggaagctgaagaatctgctcctctagttgcagacgtcccctcgccg
ttacctgttactcctattccttcttcccccgcccccgccactgttgaggcgccggtttca
aatgatctcctcacatcgccgccagacgcgtacaacttgcaaacctgtgacgtggggccc
aaaagtgcggatttagagttagagttgactaacgggacaaaaagaccctcctggaccccc
gctgaccttattagcttagagagcccgccctctgccccctctctgcccaatggagacaga
ggagacctccccccctcaggcccagttctggaggcgtcagagactctggccaagactgct
cctcctgtcaacgatgagatgattttttctgatgagaaaggcaaactggaggaggcagac
ttatcaaacgtcttgacggagatcactgcagaacacaacagtgtcatacagacaaaaacc
accgagagcaaagcatga
DBGET
integrated database retrieval system
