Sander lucioperca (pikeperch): 116047565
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Entry
116047565 CDS
T07345
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sluc03021
]
116047565
Transcription machinery [BR:
sluc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
116047565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
116047565
NCBI-ProteinID:
XP_031152306
Ensembl:
ENSSLUG00000023748
UniProt:
A0A8D0AI66
LinkDB
All DBs
Position
5:8135949..8158780
Genome browser
AA seq
2118 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWRRFVWQGPTSSPILFPVTEEDPILCSFSRC
LAADVLSVWRRHHTPGRRELWLFWWGDDPSFAELIHNELSSEEDGEWESGLSYECRTLLF
KAIHNLLERCLMNRGFVRIGKWFVKPYQKEEKTINKSEHLSCAFTFFVHGDSNVCTSVEI
AQHQPLQRLNEEHLSLAQQSSSPLQVILSPYGLNGTLTGQAFKMSDHPTQKLIEEWRQFY
PISPNPKEVPEDKMEDTDWEDDSLAAVEVLVAGVRMVYPSCLVLLPLSDLPPVVPQGSVN
TSGSLCGAQQGQAAHRDPAMSSVTLTPPTSPEEAQTDYQPAQRWLKLSSAADGYSSNNTL
HGGKIPRRLASQMVESVWQECNINRTGNKRKFTTLTNGTCEEESDKTGLWDFVECTHRPH
CTCSRHKNQKQRSSSTSGHPPSSGQPAQPAPKHKLGEKLEKGEKQQKRPQTPFHHRNSVS
EEPSLEPQTQRLCLRSQEEGSYPSLHHVDTVPSKAPTLHTHGPPADLVGSPPPPPLSPHP
CDHVEGDMTPGGMKNSSTPIHQPFYPPSVEPCLLPQKGSSEGPQLENMPMPLPFPPTYSE
TLEPTVFVGSAINPNEDSTHNPWKYFNLPRKKAFNFLTPQLPVDKIRDDSGGGGGTESVV
SVTELMSGSAHPLKVSQELIKTYAQRRNSHLASAAGDGEDSEEPDPYAFVEGDEEFSFTE
KKDKSGSEREGSKKHKVDEGAGTADDGQGPSGSKPLAFTSLIHENDLAVSYSDLDKIFNS
DEDELAPGSKRAGVGTEDKFGCKDNKAAALDPLSCISSADLHQMFPTPPSLEQQGYSPMN
SGSKDSMEAGTGLTLLDGSQLNNHFKMEVEEGLCSPKPSEIKDFSFVYKPETCQVLIGCS
MYAPLKMLPSQCMLPIKVPEDCVYTPSWTMGKMELIPPVTNVNLLTKDSNVPSVEPDYSQ
TYTPQTHTPFMSSSAPPSNSGTGILPSPATPRFSVPTPRTPRTPRTPRGPSSVQGSLKYD
NSDLYSPASTASTCRPLSSVEPATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCVCV
CNMNIRGADVGVYLKDNGEAQYPCTCGFSAVTNRRFGQLAGLFLEDELDVVVRGSDASRD
TERCFEELRASTTHKAGSLTEKPPDELILLLQDQCTNPFAPMAGVEYPKQSSAPSSFLRV
DERDCYNDCYMALEHGRQFMDNMSGGKVDETLVKSTCLHQWPKCKSADMSKLFSQDVLRV
LLSLQPVLQDTIQKKRSVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGYE
YDFVVLSPFGLPYWEKLLLDPFGSQRDVGYVVICPENEALLRGAKSFFKDLSSIYEACQL
GQHRPICKSHPEGVLKVGTTEGKSMAEQPLSDWFLKMAARDGNNEAFNKLKLFAQVCRYD
LAPYLSEQSLDSSLLSQRSPVVASSSSSFSFQTSSASSGPQSTNTTSTSSAQPAPVNSTP
PSSGSQTIGGMAAAKPSSYSPFGTAGLQGGTSQNGPQSNPPVAGGLAENGPSANQPQGPT
ESPESTMERDKVGKPTDGESHAVSYPPAIVVYIVDPFSYEDAVREVHSSAYTLGLLRCYM
EMLQFLPAYIRNAVSVQIVPCQYLLQPVRSGERHLYGQHLKSLAFSVFTQCRRPLPNSTN
FKALTGFGPGLAIDMALKNPERPECLRLYTPPFILAPVKDKQTELGETFGEASQKYNVLF
VGYCLSHDQRWLLASCTDQHGELLETCIISIDVPNRARRKKGSARRVGLQKLWEWCLGLV
QVTSLPWRVVIGRLGRMGHGELRDWSILLSRRNLQSLSKRLKETCRLCGISAADTPSILS
ACLVAMEPQGSFVIMPDSVSTGSVFGRSTTLNMQTSQLSTPQDTSCTHILVFPTSAMVQV
NTNTSEPIDINFNPINPDGSDGMGIFDLFDNDMVDPDLINILPNSPTTSPVHSPGSHYHQ
GGDGNKGQSADRMESHEEALNILQQPMALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFL
KASLHLHVSSVQSDELLHSKHSHPLDSNHTSDVLRFVLEQYNALSWLTCDPATQDRRSCL
PVHFVVLTQMYNFIMNML
NT seq
6357 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtgctttgtaccaaacggggccagtttggaggactgccactccaatctcttc
tgcctggctgatttgaccggaataaaatggcgacgttttgtgtggcaagggcccacctct
tcgcccatccttttccctgtgaccgaagaggaccctatcttgtgtagtttcagccgatgc
ctggcggcagatgtgctaagtgtgtggagaaggcaccacaccccgggtcgcagagagctc
tggcttttctggtggggggatgaccccagttttgctgagcttattcataatgagctttca
agtgaggaggatggggagtgggagagtggcctgtcctacgagtgtcgaacgctcctgttc
aaagccatccacaacctgttggagcggtgtctcatgaaccgtggctttgttcgcatcggc
aaatggtttgttaagccataccagaaggaggagaagaccattaataaaagcgagcacctg
tcctgcgcattcaccttcttcgtacacggcgacagcaacgtgtgcactagtgtggagatc
gctcaacatcagcctcttcagcgcctgaacgaggagcatctcagcctcgcccagcagagc
tccagccccttgcaagtcatcctgagcccatatggcttgaatgggaccctcaccggtcag
gcttttaagatgtcagaccaccctactcagaagctcatagaagagtggaggcaattctat
cccatcagccccaatcccaaggaggtcccggaagacaagatggaggatacggactgggag
gatgactccctggcagctgtggaggtccttgtcgcgggagtgaggatggtttacccttcc
tgcctggtgcttctccccctgtcggacctccctcctgtggtccctcagggctcggtcaac
acctcaggaagcctgtgtggtgctcagcagggccaggctgctcacagggaccctgccatg
tcctctgtcactctgactcctccaacgtcaccggaggaggctcagactgattatcagcct
gcccagaggtggctcaagttgtcctctgcggcggatggctacagctctaacaacactctt
cacgggggtaaaatccctcgcaggttggccagccagatggtggagtctgtgtggcaggag
tgtaacataaaccgtacagggaacaagaggaagtttactacattgaccaatgggacctgt
gaagaggagtcggacaaaactggactttgggattttgtggagtgtactcacaggccacat
tgcacctgctcaagacataagaatcagaaacagcgatccagtagcacctcaggacacccg
ccttcatcaggccagcctgcccagccggcccccaagcacaagctgggcgagaagctggag
aagggggagaagcagcagaagaggccgcagacacctttccaccaccgcaactctgtgagc
gaagagccgtccctggagccacagacccagaggctttgtttaagatcacaggaggagggc
tcgtatcccagcctgcaccatgtagacacagtgccctccaaagcccctacgctgcacaca
cacggcccccctgcagacctcgttggatccccgcctcccccgcccctcagccctcatccc
tgcgaccatgtagagggtgacatgactccaggtggcatgaagaactcgtccacgcccatt
caccaaccgttctacccgccgtcagtggagccctgtctgctgccacagaagggctcatcc
gaggggcctcagctggagaacatgcctatgcctctgcccttccccccaacctacagtgaa
accttggaacccaccgtctttgtgggttcagccatcaaccccaatgaagactccacccac
aacccttggaagtattttaacctgcccaggaagaaggcctttaacttcctgacgccccag
ctacctgtggataaaatacgagatgattctgggggaggcggaggaacagaaagtgtcgtg
tctgtcactgagttgatgtcgggctccgcacaccccctgaaggtgtcccaggagctgatc
aagacttacgcccagcggagaaacagccatcttgcctctgccgcaggagacggagaagac
agtgaggagccagacccttacgccttcgtagagggagatgaggagttcagcttcaccgag
aagaaggacaagtctggatcagagagagagggcagcaagaaacacaaggtggacgaagga
gctggaacagcagacgatggtcagggtccatcaggcagtaaacctttagccttcaccagc
cttatccatgagaacgacttggctgtgtcctacagcgacctggataaaatcttcaattca
gatgaagatgagctagcgcctggatccaaaagagctggagttggaacagaagacaagttc
ggctgtaaagacaataaagcagccgcattggaccccctgtcctgcataagctcagcggac
ctgcaccagatgtttcccaccccgccctccctggagcagcagggttactcccccatgaac
tccgggagcaaggatagcatggaagcagggacgggcctcaccctgctggacggcagccag
ctcaacaaccacttcaagatggaggtggaggagggactctgcagcccgaagccatccgaa
ataaaggacttctcctttgtatacaagccggagacgtgtcaggtgttaatcggctgttca
atgtacgcacccctgaagatgctacccagccagtgtatgttgcctatcaaagtgccagaa
gactgtgtgtacacgcccagctggaccatgggcaaaatggaactgatacccccagtaacg
aatgtcaatctcctcaccaaagacagtaacgtccccagtgtggagccagactacagccag
acctacacccctcagacccacacacccttcatgtccagcagtgcccctcccagcaacagc
ggcacaggcatcctgccctccccagctacgccacggttctccgtgcccacgcctcgaacg
ccacgcactccacggactccccgcggcccatcgagcgtccagggctcactcaagtatgac
aactctgacctttactcccccgcctccactgcctccacctgccgaccactcagctccgtt
gagccggccaccgtaccttccatccccgaggctcacagtctctacgtcaccctcattctc
tccgagtcagtcatgaacctcttcaaggactgcaactttgacagttgctgcgtgtgcgtc
tgcaacatgaacatcagaggggcggacgtaggcgtgtacctcaaggacaacggcgaggcc
cagtacccctgcacgtgcggcttcagcgccgtcaccaatcgccgctttggccaattggcc
gggctgtttctggaggacgagctggacgtggtggtacggggctcggacgccagtcgggac
actgagcggtgtttcgaagagctgcgagcttccacaacgcacaaggctggcagcctgacg
gagaaacctccagatgagctaatcctgctgctgcaggaccagtgcaccaacccttttgcc
ccgatggcgggcgtggagtaccccaagcagagctctgcccccagttcatttctgagggtg
gacgagagagactgttataatgactgctacatggcactggagcatggcaggcagttcatg
gacaatatgtcaggaggcaaagtagatgaaacactagtgaaaagcacctgtcttcatcag
tggccaaaatgcaaatcagcagacatgagcaagctattctctcaggatgtcctgcgggtg
ttgttgtccctccagcctgtgctgcaggacaccattcagaagaagaggagtgtgcgctcc
tggggcgttcagggaccgctcacttggcaacagttccacaagatggctgggaggggatca
tatgggacagacgagtctcctgagcctctgcccatccccacttttttggtcggttatgag
tatgattttgtggtgctgtcaccttttgggttgccctactgggagaagcttcttctggat
ccttttggttcccagagagatgtgggatatgttgtcatctgcccagaaaatgaagctctg
ctccgcggggcaaagtccttcttcaaagatctgagtagtatatatgaggcatgccagctt
gggcaacacaggcccatctgtaagagtcacccagagggcgtattgaaagtcggcacaaca
gaaggcaagagcatggcagagcagccccttagtgactggttccttaagatggctgccaga
gacggaaacaatgaagcctttaataagctcaaactctttgctcaagtgtgccgctatgat
ctagctccgtacctgtcagagcagtctttggatagctccctattgtcccagcgcagccca
gttgtggcttcctcctcctcctccttctccttccagacctccagcgcctcctcaggaccc
cagagcaccaacactaccagcaccagctctgcccaaccagccccggtcaacagcacccct
ccctcctcaggctcccagactatcgggggaatggccgcagccaagccaagctcttactcg
ccatttggtacagcaggcttgcagggcggcacgtcccagaatgggccccagtcgaaccca
ccggttgcaggggggctggcagaaaacggaccctctgccaaccagcctcaagggcccact
gagtcgccagagagcacaatggagagagacaaagtggggaagccaacagacggagaatcc
cacgctgtgtcttacccgcctgccattgtggtgtatatcgtcgaccccttcagctacgaa
gacgccgtcagggaggtccactccagcgcctacacactgggcctgctgcgctgctacatg
gagatgctccagttcctgcctgcatacatcagaaacgctgtctcagtacagattgttccc
tgccagtatctgctgcagccagtgcgcagtggggagcgtcacctctacggccagcacctc
aagtcgctggccttctcagtgttcactcagtgtcgtcggcctctgcccaactccactaac
ttcaaggctctgacgggctttggccctggtcttgccatcgacatggcactcaagaaccca
gagaggcccgagtgtttgcgtctgtatacaccgcccttcattttggctcctgtgaaagac
aagcagaccgagctcggggagacgtttggcgaggcctcccagaagtacaacgtcctgttt
gtcggctactgtctgtcccatgaccagcgctggctgctggcctcctgcaccgaccaacac
ggagaactgctggagacctgcatcattagtattgatgtacccaatcgggctcgcaggaaa
aagggctcagccaggcgagtgggcttgcaaaagctgtgggagtggtgtctcggcctggtg
caggtgacatcgctgccatggagggtggtcattggacggctgggtagaatgggccacggc
gagctgagagactggagtattctgctgagcaggaggaacttgcagtctcttagtaaacgt
ttgaaggagacgtgtaggctgtgtggcatctctgctgctgacactcccagcatccttagc
gcctgtctggttgccatggagccccagggttcctttgtcatcatgccagattctgtgtca
acgggttcagtgtttggccgcagcaccacactcaacatgcagacatcgcagctgagcaca
cctcaggacacatcctgcacacacatcctggtgttccccacctcagccatggtgcaggtc
aacactaacacttcagagcccattgacatcaacttcaatcccataaatcccgatggatct
gacggaatgggcatctttgacctgtttgacaacgacatggtggatccagacctcatcaac
atcttacccaactcccccacaacctcgcctgttcactcccctggctcccactaccaccag
ggaggagatggaaacaagggccagagtgccgaccgtatggagtcccatgaggaggctctg
aacatcctgcagcagccgatggcgctgggctactttgtctccacagccaaggctggacca
ctgcctgactggttctggtctgcctgccctcaagcccagaaccagtgcccactcttcctc
aaggcctctctgcacctgcacgtgtcttctgtccaatcagacgagctcctgcacagtaaa
cactcccacccactggactccaaccacacctctgatgtgctcagatttgttctagagcaa
tacaacgccctctcctggctgacatgcgaccctgcgacccaggaccgacgctcctgtctg
cctgttcactttgtggtgctcacccagatgtacaactttatcatgaacatgctctga
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