Sander lucioperca (pikeperch): 116047689
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Entry
116047689 CDS
T07345
Symbol
sox21b
Name
(RefSeq) transcription factor Sox-21-B
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116047689 (sox21b)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116047689 (sox21b)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116047689
NCBI-ProteinID:
XP_031152476
Ensembl:
ENSSLUG00000000636
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All DBs
Position
8:complement(20437722..20440791)
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AA seq
244 aa
AA seq
DB search
MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFSFPVPYNLGEHDALKVNGLSAGALSESI
MGHPDKAAAAAAAAAARVFFNPSMSNPYSFFDLGSKMTELSPPSFSYASPLGYPPGGATA
FTGTGGGTHTHTHSHPSPGNPGYMIPCNCTGWPSAGLQPPLAYILLPGMGKPQLEPYPAY
AAAL
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaccaatggatcacgtcaaacgcccgatgaacgctttcatggtttggtccaga
gcccagcgcagaaaaatggctcaggagaacccgaaaatgcataactccgagatcagcaag
agattaggagcagagtggaaacttctcaccgagtctgagaaaaggccattcatcgacgaa
gccaaacgactgcgagcgatgcacatgaaggaacacccagactataaatacagaccgagg
cggaagcccaagactctgatgaaaaaagataagttttccttccctgtgccctacaatctc
ggggagcacgacgcactcaaagttaacgggctttccgcgggagcactttccgagtccatc
atggggcaccctgacaaggcagccgcggctgcggcggctgcagctgccagggtattcttc
aacccgtccatgtcgaacccctactcctttttcgacctaggatccaagatgactgagctt
tccccaccttcgttttcgtacgcgtctccgttgggctacccgccgggaggcgccacggct
ttcaccgggactggtggcgggacgcacacccacactcactcacacccgtccccgggaaac
ccaggctacatgattccttgtaactgtacgggctggccctcagcaggactccagccgccc
ttagcatacatcctgctccccgggatgggaaaacctcaacttgaaccgtaccctgcatat
gctgcagcattatga
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integrated database retrieval system
