Sander lucioperca (pikeperch): 116047736
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Entry
116047736 CDS
T07345
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116047736 (npas1)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116047736 (npas1)
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GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
116047736
NCBI-ProteinID:
XP_031152558
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Position
5:complement(9957482..10024352)
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AA seq
810 aa
AA seq
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MATMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRAFASQGDPPWSPLMEGDSNCSKVRRSSHSLA
TDMFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCHTGPESASSSASTSSLAGTPEPAPSSPHSPADEPPDRGYF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSTRSVRRPIGLVALAHTLPPSTL
NEVRMESQMFVFRVNMDLQVTYCENRISEYMDLTPAEVVGHTCYHFIHVEDLENIRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWIQSSATVSINHKAPHERNVIWVNYILSRTEMPDTPL
DILQLPENVRAERLRVSSSPTDSSPQARGTQPLKSSVGKSDLDTKGREKFTTAAIQSEDR
RKRLLRSDPEGAPPETRRRLEELRHTEESVSASSDLASESEGEEEEETEWDQGGDSDRLK
QEDTGGGKQSRGGETPTRGERGSRVHNGRAVIQQLKSVVTPSPLAGSPSIKTEHEALTTG
GRWGSHTQTSTSHTHTTQPQPSHAHTPSSSLNGDSPTTPIPDSSSSSEAPPKGLFTPPSP
ALSPAMSVSSPLPREDRIVSGVVSRSSGGAGSTPDFELLQRLAAGGAAGRVLFHPLALGP
QGPQSLYAPSTIRYAPPELPPSHHHGLEHSDGLQLRSDHHKGPPPAFFPHLQRLAGLPPF
SGFSPSDSPFSSGLPFCMNGLRGAAGSEED
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatgccgtttgtcagtgaggggaagtgtgtgagtgtggagtgggatttccta
caaggactactggccaagcctcccacccttccctgtctccagaacctacgtaaagagaag
tctcgcaatgcggctcgttcacggcgggggaaggagaatttcgagttctttgagctggcc
aagatgctgcctctgccgggggccatcaccagccagctggacaaggcctcagtcatccgg
ctgaccatcagctacctgcacatgcgagcctttgccagccagggagacccgccctggagc
cctctgatggagggagacagcaactgcagcaaagtaagacgatcatctcattctctggcc
actgacatgtttgagcagcacctaggggcgcacctcctgcagtctctggatggctttgtg
ttcgtggtcagtcaggagggacgttttctctacatctcagagacagtttctatctacctg
ggactctcacaggtggagctgaccggcagcagtgtgtttgactacatccacccggcggac
cacgtcgagatggctgagcggctgggaatcaggccgcatctgagggccgaggccggctgc
cacacgggccccgagagcgcttccagttctgcatccacctcctccctggctggtacccct
gaacccgctccgtctagtcctcattctcctgctgatgagcctcccgaccgcggctacttc
atccgcatgaagtccacgctcaccaaaagaggcctgcacgtcaagtcgtctggatacaag
gtaatccatgtgacgggacgaatccgctgccgccctgcactcgtgccgggctctacgcgc
tcagtgcgtcgaccgattggtttagtcgcactggcacacacccttccgccctccacgctt
aatgaagtccgcatggagagccaaatgtttgtcttccgtgtgaacatggacctacaggtc
acatattgtgagaacaggatctcagagtatatggatctgaccccagcagaggtggtggga
cacacctgttaccacttcatccatgtagaagacctggaaaatatccggcagagccatgag
gacttgctgaggaaaggtcaggtggtgactggttactaccgttggctccagaggagagga
ggctacctgtggatccagtccagtgccaccgtctccatcaaccacaaagctccacatgaa
cgcaacgtcatctgggtcaactacatcctgagtcgaacagagatgcctgacactcccctg
gatatactgcagctaccagagaatgtgagagcagagcgacttcgagttagctcgtccccc
accgacagctccccgcaggcccgaggcacgcagccattgaagagctcagtggggaagagt
gacctcgacactaaaggcagagagaaattcaccaccgctgccatccaatcagaagacagg
aggaagcgcctgctgaggtccgaccccgagggtgctcctcccgaaacccgtcgcagactg
gaggagctccgccacacagaggagagtgtatcagcctcctctgacctggcaagcgaaagc
gagggggaggaggaggaagagacagagtgggaccaggggggagacagtgacagactgaaa
caggaagacactggaggaggtaaacagagtaggggaggagagacccccactagaggggag
agggggagcagggtgcacaacggccgggctgtgatccagcaactgaagagtgtagtgacc
ccgtctcccctggctggcagccccagcatcaagactgaacacgaagccctgaccaccggg
gggcgctgggggtcacacacacaaacctccacctcccacacacacaccacacagccccaa
ccctcacatgcacacacaccctccagcagcctcaacggcgacagccccaccaccccaatc
cccgactcttcttccagcagtgaggcccccccaaaagggttgttcactcccccgtcccca
gctctgtcccccgccatgtccgtgtcctccccactgccccgtgaggacaggattgtgtcg
ggggtggtcagtcggagcagtggcggtgcaggtagcactcctgactttgagctgctgcag
agactggctgcaggcggcgcagcggggcgggtcctcttccacccccttgccctcggcccg
cagggccctcagagcctctacgctcccagcactattcgctacgctccacctgagctgccc
ccctcccaccaccacggcttagaacacagcgatggcctgcagctacgctcggaccaccac
aagggacccccgccagccttcttcccccacctacagcggttggctggcttaccacccttc
agtggtttctccccgtctgacagccctttctcctccggcctgcccttctgtatgaatgga
ctgaggggggctgcaggctccgaggaggactga
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