Sander lucioperca (pikeperch): 116048205
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Entry
116048205 CDS
T07345
Name
(RefSeq) spastin-like
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116048205
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sluc04812
]
116048205
Enzymes [BR:
sluc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
116048205
Membrane trafficking [BR:
sluc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
116048205
Cytoskeleton proteins [BR:
sluc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
116048205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_22
AAA_5
Vps4_C
TIP49
AAA_16
AAA_14
Mg_chelatase
nSTAND3
IstB_IS21
NPHP3_N
AAA_24
DUF815
AAA_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
116048205
NCBI-ProteinID:
XP_035856322
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All DBs
Position
4:41138783..41155984
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AA seq
625 aa
AA seq
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MSPLGSSRRTGGGDGTGKLDVLWSVSYPLLAGLSLLLPLLFWLRSRNTAAVRAERRAAEE
PGGDTSNRERGGGTGSPERGDRVRSHHGRAFEFISAALRIDEDEQGSFFLPFTPNSVRKS
IIFNVVLFNKHVLHLFVKFIKYVLLNVCDACRMGVLTMKALYRYICACSGSCACLFRAKL
KTKIFCIEFGVGKLEREVFVLTQRHNVYDRPKSLVEVLSVSGAQTYIYSDRSSPAHRQAP
LRSGTSGRPGAVSRKRDSANLAPTGRPKPSCSSSSLGLPRSALLGSQRAPAAHGNSNSKG
RTSRRSTTVRSPPPPLEKKDPKKNLKNVDGKLADLILNEIVDSGSSVRFADVAGQDLAKQ
ALQEMVILPALRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLT
SKYVGEGEKLVRALFSVARELHPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGV
QSGGEERVLVMGATNRPQELDQAALRRFSKRVYVALPGEETRFSLLRNLLEKHSSPLTQL
ELQQLARMTEGYSGSDLTSLAKDASLGPIRELHPEQVRNMEASEVRNICFRDFVESLMKI
KRSVGAQTLELYARWNRDYGDTTSG
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagtcccttgggaagcagccggcggaccggtggtggtgacggtaccgggaagctggac
gtgctgtggtccgtgtcctacccgctgctggccgggctgtccctgctccttccgctcctg
ttctggctgcggagccgcaacacggccgctgtcagagccgagcgccgagccgcggaggag
cctggcggcgacaccagcaaccgggagcggggaggcggcaccggcagcccggagcgaggc
gaccgggtccgcagccaccacgggcgggccttcgagttcatctctgcggcgctgaggatc
gatgaggatgagcaaggtagcttctttctcccattcacaccaaactccgttagaaaatct
atcatctttaacgtggttttgttcaataaacatgtcttgcacctttttgtaaaattcata
aaatatgttctgcttaatgtgtgtgatgcatgccgaatgggagttctgaccatgaaggct
ttgtatcggtacatttgtgcttgcagtggcagctgtgcgtgtttgtttcgtgctaaatta
aaaacgaagattttttgcattgagtttggcgtggggaaattggaacgagaagtcttcgta
ctgacacaaagacacaatgtttacgaccgacccaagtctctagtggaggttctctccgtc
tctggcgctcagacgtacatttacagcgaccgctctagccccgcccaccgccaggctccg
ctgcgttcaggtacgtccggccggcccggcgccgtctccagaaagagagactctgctaac
ctcgcaccaaccggccgccctaagccttcctgctcttcctcctcgctgggtctccctcgc
tccgcgctgctcggctctcagcgcgcccccgctgcccacgggaacagcaacagtaagggg
agaacaagtcgccgcagcaccaccgtccgctccccccccccaccgctggagaagaaagac
ccgaagaagaacctgaagaacgtagacgggaagctggctgacctcatcctgaacgagatc
gtggacagtgggtcctccgtcagatttgcagacgttgctgggcaggatttggcgaagcag
gcgctgcaggagatggtcatcctgccggcgctgaggcccgagctgttcacagggctgcgg
gctccagccagaggacttcttctctttggtcctcccggcaacggaaagaccatgctggct
aaagctgtggcagccgagtccaacgccaccttcttcaacatcagcgccgccagcttaacc
tccaaatacgtgggtgaaggagagaagctggtccgagctctgttctccgtggccagagag
ctgcatccctccatcatcttcatcgatgaagtggacagtctgctgtgtgaacggagggag
ggcgagcacgacgccagccgtcgcctcaagaccgaattcctcatcgagtttgacggggtc
cagtcgggtggcgaggagcgggttctggtgatgggcgccaccaaccggccccaggagctg
gaccaagctgctctcaggcggttctctaagcgcgtgtacgtggctctgcccggcgaggag
actcgcttcagtctgctgaggaaccttctagagaaacacagcagcccgctgacccagctg
gagctccaacagctggccagaatgacagagggctactccggcagtgacctcacctcattg
gctaaagacgcctccctgggaccaatcagagagttgcatccagaacaagtgaggaacatg
gaggccagcgaggtgaggaacatttgtttccgagacttcgtggagtctctgatgaagatc
aagagaagtgtcggcgctcagaccctggagctgtacgctcgctggaacagagactacgga
gacaccacatctggatga
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