Sander lucioperca (pikeperch): 116048250
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Entry
116048250 CDS
T07345
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04010
MAPK signaling pathway
sluc04020
Calcium signaling pathway
sluc04510
Focal adhesion
sluc04540
Gap junction
sluc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116048250 (pdgfd)
04020 Calcium signaling pathway
116048250 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116048250 (pdgfd)
04540 Gap junction
116048250 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116048250 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sluc04052
]
116048250 (pdgfd)
Cytokines and neuropeptides [BR:
sluc04052
]
Cytokines
Growth factors (RTK binding)
116048250 (pdgfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Cofilin_ADF
Motif
Other DBs
NCBI-GeneID:
116048250
NCBI-ProteinID:
XP_031153090
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All DBs
Position
5:28313569..28388497
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AA seq
370 aa
AA seq
DB search
MSGGLVFQMWTVLLLGTITGVGRAQVSNVKVLRGNIRRHDLYCKEENITVTSVGGAIPSP
RYPNAYPRNLLLSWKLVSPPGSHIHLEFDGHFGLEEADNGVCRYDFVEVEDQSETSTIIW
GRWCGQKAPPSLKSKTNTLRVTFKSDDYFVAKPGFKVYYSLLFDCPLPASITNWEAVTIP
MLDIGAEHMPKAVTEVPFSLEDLDRTIAAFDTVEQLFRSLSPDTWRQDLDSIYTQTHIHY
RSRAYHLASRHNKVDLNRLFDDVKRYSCTPRNYSVNLREELRATNAVFFPRCLLVKRCGG
NCGCGTENWNNGCTCQASKTTLKLHEVLKYVPEFTLYQRPKRLKVRWVIDEIFLTHHEKC
ECACPSQPPR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaggattagttttccagatgtggacggttttattgttggggactataactggg
gtcgggagggctcaggtctccaacgtcaaagtgctgaggggcaacatcaggagacacgac
ttgtactgcaaagaagaaaacatcacagtaacgtcagtgggtggagccatccccagtcca
cgctaccccaacgcttatccccgcaatctgctgttgtcatggaaactggtgtcgccacca
gggagccacatacacctggagtttgacggacacttcggcctggaggaagctgataatgga
gtgtgcaggtatgactttgttgaagtggaggaccaatcagagaccagcactataatttgg
ggtcgctggtgtgggcagaaggcaccacctagtcttaaatccaaaaccaacacgctcaga
gtcaccttcaagtctgacgattactttgttgcaaagccgggattcaaagtctactactca
ctgctgtttgactgtcctctgcctgcatccatcaccaactgggaggctgtcactattcca
atgttggacattggtgcagagcacatgccaaaggcagtcacagaggttcctttctcatta
gaggatttggaccggaccatagctgcctttgacactgtggaacagctgttcagatccctg
agcccagacacctggagacaggacctggacagcatctacactcaaacacatatacattat
agatccagggcctatcatctggcaagcagacataataaagttgatctaaaccgtctcttt
gatgatgtcaagcggtacagctgtacgcctcgcaactactctgtaaacctacgcgaggag
ctgagggccaccaacgctgttttcttccctcgatgtctgctggtcaaacgctgtggaggc
aactgtggctgcggaactgagaactggaacaatggctgcacctgtcaggcctccaaaacg
acactcaaactacacgaggtgctgaagtacgtcccagaattcactctgtatcagcgccct
aagaggctgaaggtgcgctgggtcatagatgagatcttcctcacacaccatgaaaagtgt
gagtgtgcgtgtccctcccagccccctcgctga
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