Sander lucioperca (pikeperch): 116048345
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Entry
116048345 CDS
T07345
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03440
Homologous recombination
sluc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116048345 (brca2)
03460 Fanconi anemia pathway
116048345 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116048345 (brca2)
03036 Chromosome and associated proteins [BR:
sluc03036
]
116048345 (brca2)
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116048345 (brca2)
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
116048345 (brca2)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
116048345 (brca2)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
116048345 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
116048345 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
116048345
NCBI-ProteinID:
XP_031153254
LinkDB
All DBs
Position
5:complement(21931128..21946981)
Genome browser
AA seq
2965 aa
AA seq
DB search
MDLPSKNMYDTYKDEIWKELGPLDPDWFEALTAQTFTSEGNVSDQDDLCANQEGHFKTPF
DRTAVESQLFSTPKVFRQRRVVSPETEDEQSFTGEQEKETSPWTATQSPYLFRMSKDGVR
GAKYGGFHPHCQDSFDLLHTTQKSPVSYSKHVSESLGAQLQSDMSWTSSLNTPPPSTLIL
SKTDESPCPVSLSDEKNVVLVRKLFPSLSNASRVGVVSPNKNDISNVHQGVVSPEPGQNP
ESHDSPQSSLNQRDAVWKQTLPDAIEDGDIPRTVASVLDGAENVLSIFFTNSSSALRKVK
TDRIKRKQIILTKEHDCSSADTSPTSSAASSEQRTADQAPGRLPSPPPVETGEIGITQWS
PLSLSEISRCTVDTSCHDNNPVKQVENKILTEQLRSDPGQLVRPPMKLTDSGFTKKKRTF
VYTVKTSKTQVQGKETPSRKMDSDFSGQEVNVKQLRKSPGEADCCRNGKNEVQKNLTEDN
LPPSVQAKVQDLDMSQLCKDFAQDFSQMSDPIKLSRIAEDTPQNGFSPSACLSALKQAKK
KAVQANLHDCDAISNRRHVSTTNQNNPINEGTISDSGFQSAVVDSTHVTASSFVLPSSEI
NGQSQQWTGFKTDIHRTTPFTSTNNGNGEAHLDDILPEAEMHGKLSSAVKECQTVGPGRE
SELHIERTSTQLPSNAKGTVDNNCVLLNGQVHGSLPEKTVDLPSVHTSGFKTASHKGIHI
SSANLERAKRLLEETEEEMTLSDRPTKCAHDTEDEMSMSDGSVKNPTTNSNQPLSSSEKN
ADISCQLTASQKADVTELCTLLEEADSQFEFTQFKTAKLKQHCQDNGTTPKEVDRELDPD
FLSGIDFDDSFSSEAEKHLAVTVMHDKMALVSDGKPNCETSNVTSKSAGLSLSSAMKKEN
SSPEEVSFSSKHISEDRSSILSAEPKNLNRHGQTKTSQLENKNPLMLGGVGFKTAGGNVL
KVSKKCLSKARALFADLEENLVTSQNPPDKQNSKTDAKTTPKHSVDNHTGDLLHCKKDNS
KFTGDTGERVQSCFSNTMESVCSDRKPRRDEDAMKTLKNSVTDTTTRQRGFQIANGKGIS
ISAKSMQEEDAFFRNCDVVSGNAGMSVKPKKSIPLPGSVSLKETLPKGKHVQGIKENLSE
EPINEFENGNAGPAARHNVDSHNFGVKSTLALTNAASFRENPSSTAKAHSSLSCTTSKSI
GPSAISELSNGGGFCLASGEKVSTSADAMKKAEHLLNEMHTIDDANKQPKQKGDALRTGH
LNNQIQVPPSKNGSFQMASGKRVAISSAALKKAKTLLSECDKVEDKICVKPTHSKMAMPG
PPPRNSGFLAASGKPVAFSSEALQKAKALFSDISLSAEIPAVPDTRNSDKKQDNADNTEK
KHCGFTTAGGAKVHVSQKNLLKAKNLLEEFDDGSFSAKAMQEADAFFKDCDIMDDNDAMS
VKHEKSIASVSGSGIGKKNLSKFKNEVSVNISENPGGGRTELENVNMGLVVNHEKMLQPD
DVEIHKGVVKNTLDSTKAPSLHGNPTLMTEPLSLRLCTTSIGSSANNELSKGGGFATASG
KKVSVSDDAMTKAKSLLNESATFEDTNKQLKHKEDIFPTRNGGFQMASGKGVTISSAALK
KAKTLLSECDKVEDKICVKPTHSKMAVPGPPPRNSGFLAASGKPVAFSSEAHQKAKALFS
DISLSAEIPAVPDIRNSDKKQDNADNTEKKHCGFTTAGGAKVHVSQKNLLKAKNLLEELA
DGECHSNSYSTSPHNTHKSDLSKVKDVKRTLNCNLSPEEEMSSVLDCEINQTSSSEGSNV
KRPQDSSVVNFQSLNLSGCTETQQRFFAQEALDCTKALLEDESLAGQSLSMTLENAPLQE
NPKSSYRSVEEQKGTGKRSAEDPDMTGQPPLKRRLLEEFDRTVDGPRGSTFHPEKSFPND
IMKDRRVFKYSVSLHPNITRPHRNGKNYVEPTLQKTKPTQQSTPEDRRSAHSKMPVFVPP
FLKDAKTQSHKNTVLKDNTKTPTSFVPPFKKQITVVQESSSKPQEETPFNSNTYVPPTKK
TQSNTDVTGNKSKEDIQTVASADTANDNLLNNQNFPVICGSEDSAAEASPVEDTVSTSQD
MFQDLHNVELARDMQDMRIRKKKRQTIRPLPGSLFLTKTSGLPRIPLKAAVNGKPPARYT
QKQLYGRGVHQHVYEITSETAESFRFNLQQFLKQEAFIDGGGVQLADGGLLIPSNDGTAG
KEEFHRALCDTPGVDPKLISEAWVYNHYRWIVWKQASMERSFPETMGSLCLTPEQVLLQL
KYRYDVEVDHSRRPALRKIMEKDDTSAKTLVLCVCGVVSRGQSPNRQSFNDTKTPQGADT
KVENPSAVVWLTDGWYTIKAQLDEPLTAMLNKGRVAVGGKLIIHGAQLVGSQDACSPLEA
PESLMLKICANSSRPTRWDAKLGFHRDPRPFLLPVSCLYSSGGPVGCVDIIILRSYPIQW
MERKPDGGVVFRSVRAEEKEARRYNSIKQKAMEILYAKIQAEFEKEDKGNKPQHRRRTIT
RQEISNLQDGEELYEAVGNDPAYLEAHLSEEQLETLRAYRCSLMEKKQAVLQDRYRRALE
SAEDSEGICPKREVTPVWRLCVADSMDQPGSVYQLNLWRPSSELQSLVKEGCRYKVYNLT
TSDGKKHGCSTTVQLTGTKKSQFQDLQASQELLATHFQPRVSSCFVDLQNPEFQPLCGEI
DLTGYVISIVDGQGFSPAFYLTDGKLNFVKVRCFSSLAQAGLDDLVKPHVLLALSNLQLR
GQSTSPTPVVYAGDLTLFSTNPKEVHLQESLSQLKNLIQGQENFLPMAEEKLSHLVKSDG
LKSISSPALQTRTPASATVRRQDTKTSVTPQQSVRSLGAFTPVSRKPPAANCSSEKDPIS
LKRKRALDYLSRIPSPPPLSHLGSVASPCINKTFNPPRRSGTPSTLKTVQTPACKPVNSP
VEDDWVNDEELAMIDTQALRVGDLL
NT seq
8898 nt
NT seq
+upstream
nt +downstream
nt
atggatttaccctccaaaaacatgtacgacacatacaaagatgaaatctggaaagagctg
ggacccctggaccctgactggtttgaggcactgacagctcagacattcactagcgaggga
aatgtctctgatcaagatgacctgtgtgccaaccaagagggacattttaaaacgcccttt
gacagaactgcagtagaaagtcagctgttttcaacccccaaagtttttagacaacggcga
gttgtgtctcctgaaactgaggatgagcagtcgttcactggtgaacaagaaaaagaaacc
tcgccatggacagcaacacaaagtccatatttgtttcggatgtcaaaagacggggtccga
ggtgcaaaatatggaggtttccaccctcattgtcaggacagttttgatctgcttcatacc
acacaaaaatccccagtcagctattccaagcatgtatctgaaagtctcggagcacagctt
cagtctgatatgtcttggaccagttctctgaatactccaccaccatccaccctgatttta
tctaaaacagatgagagtccctgtccagtgagtctttctgacgaaaaaaatgttgttttg
gtacggaagcttttcccttctctttcaaatgcatccagagtcggagtcgtgtcacccaac
aagaatgacatatctaatgttcaccaaggtgttgtttcccctgagcctggtcagaatcca
gagtcccacgactccccccagagttcactgaatcagcgtgacgctgtttggaaacagacg
ctaccagatgctattgaggatggagatatacccagaactgtagcaagtgttcttgatgga
gctgaaaatgttctctctatatttttcaccaacagtagttcagcattgagaaaagtgaaa
actgacagaatcaaaagaaagcaaatcatcctgacaaaagaacatgactgcagctctgcg
gacacctcaccaacaagcagcgctgcatccagtgaacagagaacagctgatcaggcgcct
ggcaggcttccctcacccccaccggtggaaactggagagattggaatcacccagtggtct
ccgttgagtttatctgaaatttcacgttgtactgtggatacttcttgccatgataataat
cctgttaaacaagtggaaaacaagattttaacagaacaactgcggagtgaccctggccag
ctagtcaggccacctatgaaactcacagactctggattcactaagaaaaagagaacattt
gtttacactgttaagacttcaaaaacgcaggttcaaggaaaagaaacgccgtctcggaag
atggactctgacttctctggacaagaagttaatgtgaagcagttgaggaaatccccaggt
gaagcagactgttgcaggaatgggaagaatgaggtgcaaaaaaatctcaccgaagacaat
ctacctccctctgtacaagcaaaagtccaggatctggacatgtcgcagctttgcaaagat
tttgctcaagacttcagtcaaatgtcagaccccatcaaactgagtagaatagcagaggat
actcctcaaaatggcttctctccatcagcttgtctgtcagccttgaaacaagctaagaag
aaagcagtgcaagcgaaccttcatgactgtgatgccatcagtaacagaagacatgtttct
accactaatcaaaataaccccatcaatgagggcacgataagtgacagtggattccagtca
gctgttgtagatagcactcacgtgactgcatcatcatttgttcttcccagctcagagatc
aatggtcaaagtcaacagtggactggctttaagactgatatccacaggaccactcctttc
acatctacaaataacggaaacggagaagcacatttggatgatattttaccagaagctgaa
atgcatggcaaactgtccagtgcagtcaaggaatgccagacagtgggccccggcagagag
agtgagttgcacattgagagaacatcaacacaactacccagcaatgcaaaaggaactgtt
gataacaattgcgttctacttaatggtcaagttcatggcagtctgccagagaaaacagtt
gatcttccttccgtccatacatcaggattcaaaacagcttcacataagggtatacacatt
tcctcagccaacctggagagagccaaacgtctcttagaagagactgaggaagaaatgact
ttaagtgaccggcctaccaaatgtgcacatgatactgaagatgaaatgagcatgagtgat
ggatcagtgaaaaatccaaccactaactcaaaccaaccactttcttcaagtgaaaaaaat
gcggatatcagttgccagttaacagcttcacaaaaagctgatgtgactgagctgtgcact
ctcttggaagaagcagacagccagtttgaatttacacagtttaaaaccgcaaagctgaaa
caacactgtcaagataatggcaccacgcccaaagaagttgacagagaacttgacccagat
tttctttcaggtatagattttgatgacagttttagttcagaagctgaaaagcacctggca
gtaactgtgatgcatgacaaaatggccttagtttcagatggtaaaccaaactgtgaaaca
tccaacgtcacaagtaaatccgcaggtctgtcattgtcgagtgcaatgaaaaaagagaat
tcctctcctgaagaggtgtctttctcttcaaagcacatctctgaagaccgtagcagtatt
ctgtcagctgaacccaaaaatcttaacagacatgggcagactaaaacaagccagctagag
aacaaaaatcctttaatgcttggtggtgtgggatttaagactgcaggaggaaatgttttg
aaagtttcaaaaaagtgtctgagcaaagctagagctttgtttgcagatttagaggagaat
cttgtgacgagtcaaaacccacctgacaaacaaaatagcaaaactgatgctaaaacaacg
cctaagcacagtgtggataatcacactggtgaccttttgcattgtaaaaaggataattcg
aaattcacaggtgataccggagaaagggttcagagctgtttttccaacacgatggagtct
gtctgttccgacagaaaaccacgcagagatgaagatgctatgaaaactttgaaaaacagc
gtaacggacacaaccacgcgtcaaagggggttccagatcgccaatgggaaagggatttct
atttcagcgaaatctatgcaagaggaagatgctttcttcagaaactgtgatgttgtcagc
ggtaatgccggcatgtcagtaaaacctaaaaagagcatacccttgcctggaagtgtcagt
cttaaggaaacccttccaaaaggtaaacatgttcaagggataaaagaaaacctttctgaa
gaaccaatcaatgagtttgaaaatgggaatgctggtccagctgcacgccataatgtggac
agtcacaattttggtgtcaagagtacactggctttaacaaatgcagcctctttccgtgaa
aacccttcttcgactgcaaaggcacattcatctctctcatgcacaacatcaaagagtatt
ggcccctctgccatcagtgaattgagcaatggtggtggattttgtttagccagtggggag
aaagtatctacgtcagctgatgcaatgaaaaaagcagagcatcttttgaatgaaatgcat
acaattgatgatgcaaacaaacaaccaaaacaaaaaggagacgctttaagaacaggccat
ctcaacaatcaaattcaggttccaccatctaagaatggtagctttcagatggccagtggc
aaacgagtggccatttcatctgcagctctcaagaaagcaaaaactcttttaagtgaatgt
gataaagttgaggataaaatctgtgtaaaaccaacacattccaagatggcaatgcctggt
ccaccacccaggaatagtggatttcttgcagccagtggtaagccagtagcattttcatct
gaggccctccagaaggcaaaagctctcttcagtgacatcagtttgagtgcagagatccca
gctgttccagacacaaggaacagtgacaagaaacaagacaatgctgacaatacagagaaa
aagcattgtggtttcacaactgcaggcggggcaaaagtccatgtgtcacagaaaaatctg
ttgaaagcaaaaaaccttttggaagaatttgatgatggttcattttcagcaaaagcaatg
caagaagcagatgctttcttcaaggactgtgacattatggatgataacgatgctatgtca
gtaaaacatgagaaaagtatagcatctgtgagtggaagtggcattgggaagaaaaacctt
tcaaaatttaaaaacgaggtgtccgtaaacatttctgaaaatcctggaggtgggcgcact
gagttagaaaatgtgaacatgggattagttgtaaaccatgaaaagatgctgcagcctgat
gatgtggagattcacaaaggtgttgttaagaacacattggattctaccaaagcaccttct
ttacatggaaacccaactttgatgacagagccactttctctccggttgtgcacaacatct
attggttcctcagccaacaatgaattgagcaaaggtggtgggttcgctactgccagtggg
aagaaagtatcggtttcagatgatgcaatgacaaaagcaaagtctctattgaatgaaagt
gctacatttgaggacacaaacaaacaactgaaacacaaagaagacatcttcccaacacgg
aacggtggatttcagatggccagtggcaaaggagttacaatttcatctgcagctctcaag
aaagcaaaaactctcttaagtgaatgtgataaagttgaggataaaatctgtgtaaaacca
acacattccaagatggcagtccctggtccaccacccaggaatagtggatttcttgcagcc
agtggtaagcctgtagcgttttcatctgaggcccaccagaaggcaaaagctctcttcagt
gacatcagcttgagtgcagagatcccagctgttccagacataaggaacagtgacaagaaa
caagacaatgctgacaatacagagaaaaagcattgtggtttcacaactgcagggggggca
aaagtccatgtgtcacagaaaaatctgttgaaagcaaaaaaccttttggaagaattggcc
gatggagagtgtcattcaaactcatactcaacaagcccacataacacccataagtcagat
ctatcaaaagtgaaagatgtgaaaagaactttgaattgtaatctcagccctgaagaggaa
atgtcaagtgtgctggactgtgaaataaatcagacaagcagcagcgagggatcgaatgtc
aaaaggccacaagattcttcagttgtaaactttcagtcacttaacctaagtggctgcact
gaaacccagcagaggtttttcgcccaggaagctctggactgcactaaagctttgttagag
gatgaaagtctagctggccaaagtctctcaatgactttagaaaatgcgccactgcaagaa
aacccaaaatccagctacagatctgtagaggaacaaaaaggaactgggaaaagatcagcc
gaggacccagatatgactggtcagcctcccctgaaaagaagattactggaagaattcgac
agaactgtcgatggcccaagaggttcaaccttccatccggaaaaaagttttccaaatgat
ataatgaaagacaggagggttttcaagtacagcgtctctctccatccaaacatcacgaga
ccacacaggaatggaaagaattatgtggaacccaccttgcaaaagacaaaaccaacacaa
cagtcaaccccagaagaccgcagatcagcacattccaagatgccggtgtttgttcctcca
ttcctcaaggatgcaaagacacagagtcacaagaatacagtgcttaaggacaacacaaaa
acacccacttcatttgttcctccattcaaaaagcaaataactgttgtccaagagagctcc
tctaaaccccaagaggaaacaccctttaacagcaacacttatgtaccgcccactaaaaaa
acacaaagcaacacagatgtaactggtaataaaagcaaagaagacattcagacggtggcc
tcggctgacactgcaaatgataatctgctaaataatcaaaactttcctgttatctgtgga
tccgaggactctgctgcagaggcctcacctgtggaggacacagtgtccacaagccaagac
atgtttcaggatcttcataatgtagagctggcacgagatatgcaagacatgaggatcagg
aaaaagaagcgccagaccattcgacctttgccgggaagtttgttcctaaccaaaacctcc
ggattgccgaggataccattaaaagctgcagtaaatggaaagcctcctgcaagatacacc
caaaaacagctgtatggacgtggagttcatcagcatgtgtatgagatcaccagtgagacg
gccgaatcttttcgcttcaatttacagcagttcctcaaacaggaagcctttatagacggc
ggtggtgttcagcttgctgatggaggattactgatccccagcaatgatgggactgcaggg
aaagaagagtttcatagagcattatgtgacaccccaggtgtggaccctaaactgatcagt
gaggcgtgggtgtacaatcactaccgatggattgtatggaagcaggcctccatggaaaga
tcatttccagaaacaatgggcagcctctgtctcaccccagagcaggtcctcctacaactc
aagtacagatatgatgtagaggtggaccacagccgcaggccggctctaagaaagatcatg
gaaaaggatgacacatcagccaaaaccctggtcctctgtgtatgcggggtcgtctccagg
ggccagtccccaaacagacagagtttcaatgacactaagactccacaaggtgctgatacc
aaggttgaaaacccgtctgcagttgtctggctgacagatggatggtacaccattaaagcc
cagctggatgaacctttgactgccatgcttaacaaaggtcgagtggctgtcggtgggaag
ttgatcatccatggagctcagctggtgggatctcaagatgcttgctcccctctggaggca
cctgaatctctcatgttaaagatttgcgccaatagcagcagacctacacgatgggatgct
aagctgggatttcacagggatccacggccattcctgcttcctgtctcctgtttgtacagc
agcggaggaccagtaggatgtgtggacattataattctgagaagctaccccatccagtgg
atggagaggaaaccagacggaggcgtagtgttccgttctgttcgcgcagaagagaaggag
gcgagacgatacaacagcatcaaacaaaaagctatggagatcctatacgccaagattcaa
gcggaatttgaaaaggaggacaaaggtaataaacctcaacatagaagacggacaatcacc
cgtcaggagatttcaaatcttcaagatggagaggagctctatgaagcagtggggaatgac
ccagcttacctcgaggctcatttgagtgaagagcagttggagactctgcgtgcctaccgg
tgttctctgatggagaagaagcaggctgttctgcaggatcgctaccggagagctttagaa
agtgcagaggacagcgaaggtatctgtcccaagcgagaggttacacctgtgtggagactc
tgcgttgctgactccatggaccaaccaggcagtgtttaccagttgaatctttggcgacct
tcctcggagcttcagtctttagtgaaggaaggctgtcgatacaaagtctataacctcacc
acttcggatggaaagaaacatggttgtagcacaacagttcagctgactgggacaaagaaa
tcccagtttcaggacctacaggcttctcaggaattgttagccacacattttcaaccgagg
gtctcttcctgttttgtggatcttcaaaacccagaattccagccgctgtgtggagaaatt
gatctcacaggatatgtcatcagtatcgtagatgggcagggtttctctcctgcattttat
ttgaccgatgggaaactgaactttgtcaaagtgcgctgttttagcagcttggctcaggct
ggcttagatgatttggtaaaaccacatgtcctcttggctctgagcaacctgcagctgaga
ggtcagtccacatctcccactcctgttgtgtacgctggagatctgaccctcttctcaaca
aaccccaaggaagtacatctacaggaatccctcagccaactcaaaaacctgatccagggt
caggagaacttccttccaatggctgaggagaagttatcacatttagtcaaatctgatggc
ctaaagtccatctcctctccagctctgcaaacacgaaccccagcttctgcaacggtcaga
agacaagacacaaaaacaagtgtgacccctcagcagtcagtcagaagccttggagcattc
actccggtcagtaggaaacctcccgcagcaaactgttcgtcagagaaagaccctatcagc
ctgaagaggaagagagctctggactatctgtctcgcatcccgtctccaccacctctctcc
catctgggctcagtggcgtctccatgtataaataagacattcaacccccctcggaggtct
gggacacctagcactttaaaaactgtacagactccagcttgcaaacctgtcaattcaccc
gtggaggatgattgggtgaatgacgaggaactggctatgattgatactcaggcattgcgt
gttggtgatttactgtag
DBGET
integrated database retrieval system