Sander lucioperca (pikeperch): 116048446
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Entry
116048446 CDS
T07345
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116048446
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Others
Others
116048446
Endosome - Lysosome transport
116048446
Endosome - Golgi transport
116048446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
116048446
NCBI-ProteinID:
XP_035856381
Ensembl:
ENSSLUG00000001332
LinkDB
All DBs
Position
4:complement(23313471..24691545)
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AA seq
1223 aa
AA seq
DB search
METWAGLCPGLHLSLGIWVMIAAHTLQHATAGITCASCTSPVQLQLEELLAMRTDPTQEP
DTLKNIRVEFRELGEQNTGVEDDNDGVSVEEDALRSKEESHRGSDEAGEPEKAEDAALRR
AKRSGPEFAEFSDSEHGRSGRAGVDARAPEGDRGSLFDGDKQGRSEFRWNRDEGGRADNR
QDEPKISSSTFSLTGDSAHNHAVVYWSGQNSSVILILTKLYDFHIGSVTESTLWRSTDYG
STYERMNDKVGSKTVLSYLYVCPTNKRKIMVLTDPEFESSVLISSDEGASYQKYRLAFYV
LSLLFHPTEEDWALAYSHDQKLYSSLDFGRKWQLIHERVTPNRFYWSVSGLDKDPDLVHM
EAHTPDGNVQYVTCRAPMCTEANRNYPFPGYIDISSLVVQDDYIFIQVPTSGRASYYVSY
KRDSFIQIKLPKYSLPKDLHIVSTDEKQVFAAVQEWNQNDTYNLYLSDTRGIYFTLAMEN
VKTTRGIGGNQMLDLYEVAGIKGMLIANKRQDNQVKTYMTYNKGRDWRLLQAPAANLDGN
EIHCILPFCSLHLQLQMSENPYLSGTISTKSSAPGIIVATGNIGAELSYNNVGMYISSDA
GNSWRQIFEEEHNVWFLDKGGALIAVKQPSVPTRHLWVSFDEGRQWTQHSFSLVPLFVDG
VLVEAGAENQIMTFFGHFSHRSEWQLIKIDYKSIFSRKCTDEDYDTWHLHNQGEPCVMGQ
KQMYMKRRPGNYCMLGKDYSRILSAESCICRAHDFECDYGYERRSDGNCRPAFWFNPSTV
SRSCSQGQNYLNSTGYRKVVLNNCTKGVKEMYTARKQQCPNRPPKGLLLTTKDGKLTANL
GSNVTFLVHLDEGDSMRTNIQLDFGDGTAVSYSNLSWTEEGIKHVYKSAGIFRVTALADN
TLGSDTTTLFLHVTCPVEHVQLLAPFVVIKNKEVNITAVVLPSHPRTVTYFWWLGNNTEP
VITLDGSISHTFSMDGMHTITVQVAAANAILQDTKTIAVKEFFKSLLLSFSPNLDEFNPD
IPEWRQDVGRVIKKALLQVSDFPEGQLLVAVFPGVPTAAELFLLPHKNQSEGRKKSEEEL
EQVSNIIVSALNQNLVEFEVKPGIRVIVYNTQLTLAPLVDSNPRHSSSAMLMLLSVVFLG
LAVFLIYKFKRKIPWINIYAEVNQEKEQEMIGSVGQGDSTPKITLSEFSTSKELMEKEVD
ARVKRGVGNACESTREIPNCTSV
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggagacttgggctggcttgtgcccaggcttgcacttatctctgggtatctgggtgatg
atcgccgctcataccctacaacatgccacggcggggataacttgcgcatcttgcacgtcg
ccagttcaacttcaactggaggaattactggcgatgcgcactgacccgacacaggagccg
gataccttaaaaaacatccgagtagagtttagggaactcggggagcaaaatacgggagtg
gaggacgacaatgacggagttagtgtagaggaagatgcactaaggtccaaggaagagagc
caccgcggcagtgatgaggcaggggagcccgagaaggctgaggatgctgcgctacggaga
gcgaagagaagcggtcctgagtttgcagagttcagcgactcggagcacgggcggagcggc
cgcgctggcgtagatgcgcgcgctccggagggggatcggggctcattgtttgacggagac
aagcagggcaggtccgagttcagatggaacagggatgaaggggggagagcggataaccgg
caggatgagcccaagatcagcagcagcactttctctctaacgggggactctgcacataac
cacgcggtggtttactggtcggggcaaaacagcagcgtgatcctgattctaaccaagctt
tacgactttcacattggcagcgtcactgagagcactctttggagatctactgactatggc
tccacatatgagagaatgaatgacaaagtcggatccaagactgtcctgagttacctgtac
gtctgtccaactaacaagagaaagattatggtgttgacagatccagagtttgagagcagc
gtgctcatcagctctgacgagggcgcaagttaccagaagtaccgcctcgctttctacgtc
ctgagccttttattccaccccactgaagaggactgggccctagcctacagtcatgaccag
aagttgtacagttcactggactttggaagaaaatggcagctcatccacgaacgcgtcacg
ccgaacagattctactggtctgtctctgggctcgacaaggatccagatctggtccacatg
gaggctcatacaccagatggaaatgtgcagtatgtcacatgcagagctccgatgtgcaca
gaagctaacaggaactacccattccctggatacatcgacatcagctctttggtggttcaa
gatgactacatattcatacaggttcctacatcaggacgagcctcctattatgtgtcctac
aagagagactcatttattcaaatcaaactacccaaatattcactgcctaaggatttacac
attgtcagcactgatgagaagcaggtctttgcggcggtacaggagtggaaccagaacgac
acctataacctctacctgtctgacaccagagggatctacttcaccttggccatggaaaat
gtcaagaccactaggggcatcggagggaaccagatgctggatctgtacgaggtggcagga
attaaaggcatgttgattgctaacaagaggcaagacaaccaggtcaagacctacatgacc
tacaacaaaggccgggactggaggctgctgcaggctcctgcagctaacctggatggaaac
gaaattcactgcatacttcctttctgttcgctccatctccaactgcaaatgtcagagaac
ccttacttgtcaggaacaatctccaccaagagttctgcaccggggatcatagttgccacg
ggaaacatcggagcagagctgtcttacaacaacgttggcatgtatatatcttccgatgct
ggcaatagctggagacagatttttgaagaggagcacaacgtgtggtttctggacaaagga
ggagccctcattgctgtcaaacagccatctgtgccaaccagacacttgtgggtcagcttt
gacgaggggaggcagtggacccaacacagcttctccttggtgcctctgttcgtggatgga
gtcttggtggaggctggggccgagaaccagatcatgacattttttggacacttcagccat
cgttctgaatggcagctcatcaagatagactacaagtccatctttagcaggaaatgcaca
gatgaagactatgacacctggcacctgcacaaccagggtgagccctgcgtgatgggacaa
aaacagatgtacatgaagcgcaggccgggaaactactgcatgctgggaaaggactactcc
agaatcctctcagctgagtcctgtatttgtcgagctcatgactttgaatgtgattatgga
tatgagcggcgcagcgacgggaactgccggcctgccttctggttcaacccctccactgtc
tccagaagctgcagccagggtcaaaactacctcaacagcacaggttaccgtaaagtggtg
ttgaacaactgcactaaaggagttaaagaaatgtacacggccagaaagcagcagtgcccc
aacaggcctcctaaaggactcttgctgacaaccaaagacgggaaactcaccgccaacctg
ggcagcaacgtcaccttcctggttcatctagatgagggtgactctatgcgcaccaacatc
cagctggatttcggcgatggcacagccgtgtcctactccaacctgagctggaccgaggag
gggatcaaacacgtgtacaagtctgccggaatattccgggtcacagcgttggcagacaac
acgctgggttctgacaccacaactctcttcctgcatgtcacatgtccagtggagcatgtc
cagcttctcgctcccttcgtagtcataaagaacaaggaggtgaacatcacagcagtggtc
ttacccagccacccacggaccgttacttacttctggtggctaggcaacaatactgagccc
gtgataacattggacggaagtatttcacacaccttctccatggacggcatgcacaccatc
acagtccaggtggctgcagccaacgccatactgcaggacaccaagaccatagcagtcaaa
gaattcttcaaatcgctacttttatctttctcccctaatctggacgagttcaaccctgac
atacccgagtggagacaggatgtggggagggtaattaagaaggctctgctccaagtgtcc
gacttcccggaggggcagctcttggtagctgtattcccaggagttccaacagctgctgag
ctcttcctgttacctcacaagaaccaatcagagggcagaaaaaagagtgaggaggagcta
gagcaggtatccaatataattgtaagcgcgctgaaccaaaacttggtggagttcgaggtc
aagcctggtataagggtgattgtgtacaacacacagttaacactggcacccttggtggac
tccaaccccagacacagcagctcagctatgctcatgctcttatcagtggtgttcctgggc
ctagcagtgttcctcatctacaaattcaagagaaaaataccttggatcaacatatacgct
gaggtgaaccaggagaaagagcaggagatgattggctcggtgggccagggggacagcacg
cctaaaatcactctgagtgagttctccacatccaaagaactcatggagaaggaagtggat
gccagggtcaaaaggggagttggaaatgcctgtgagagcacaagggagattccaaactgt
actagcgtgtaa
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integrated database retrieval system
