Sander lucioperca (pikeperch): 116048459
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Entry
116048459 CDS
T07345
Symbol
hnf1ba
Name
(RefSeq) hepatocyte nuclear factor 1-beta-A
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116048459 (hnf1ba)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
116048459 (hnf1ba)
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
APP1_cat
LolA
Motif
Other DBs
NCBI-GeneID:
116048459
NCBI-ProteinID:
XP_031153462
Ensembl:
ENSSLUG00000005321
UniProt:
A0A8C9XKN6
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Position
5:complement(23887983..23905358)
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AA seq
571 aa
AA seq
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MFSKMVSKLTSLQQELLSALLDSGVTKDVLIQALDDMDPSPPGFGVKLENISMSPVPPHS
GKMNGADADSKPVFHTLTNGHSKGKLSGDEGSEDGDDYDTPPILKELQSLNTEEAAEQRA
EVDRMLSEDPWRAARMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAAL
YTWYVRKQREILRQFNQAVLGSGSNMTDKGNQDPVFFFPEFNPSGQGMGPPGEEVGSEPS
CKKMRRNRFKWGPASQQILYQAYERQKNPSKEEREALVGECNRAECLQRGVSPSKAQGLG
SNLVTEVRVYNWFANRRKEEAFRQKLAMDSVSLPPHSMNPLLSHSSPHHTSISPPMRYSQ
GPSEVTSSTAISHHSSNGMVTSQSVLQQVSPGGLDHSHSLLSPDVKMISGSGGGLPPVST
LTNIHSSHHSHQQTQNLIMPLSGVMAIAQSLNTSQSQPVPVINSVAGSLAALQPVQFSQQ
LHSPHQQSLMQQSSSHMSQQPFMATVTHSHMYPHKQEPPQYSHPSRFPSAMVVTDANSIS
TLSSMSSSKTDGPVNKMVQLGGLSWCPLQAW
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgttctctaaaatggtatccaagctgacatccctgcagcaggagctcctcagcgccctg
ctggactcaggagttaccaaagatgttctgatccaggccctggatgatatggaccccagc
ccgccgggctttggagtaaaactggagaacatatccatgtcccccgttcctcctcacagc
ggcaagatgaacggggcggacgccgactccaagcccgtcttccacacgctcaccaacggc
cacagcaagggcaagctgtccggggacgagggctctgaggacggggacgactacgacacc
ccgccgatactgaaggagctccagtcgctcaacacggaagaggccgccgagcagagggcg
gaggtggatcgcatgttatcagaggatccatggcgtgctgcccgtatgatcaaaggttac
atgcaacagcacaacatcccccaacgggaggtggtggacgttacaggactgaaccaatct
cacctctcccagcatctcaacaaaggcacgcccatgaaaacacagaagcgagcggccctc
tacacctggtatgtcaggaaacagcgggaaattctcagacagttcaaccaggcagtgcta
ggctctggcagcaacatgacagacaaaggcaatcaggatccggtgttttttttcccagag
ttcaacccgtctggtcagggcatgggtccgcctggtgaagaggttggcagtgaaccctcc
tgcaagaaaatgagacgtaaccgtttcaaatgggggcctgcgtcccagcaaatcctgtac
caggcctatgaacggcagaaaaaccccagcaaggaggagagggaagcgttggtaggagag
tgcaacagagccgaatgtcttcagagaggcgtctccccctccaaagctcagggcctcggc
tctaatctggtcactgaagtgcgagtctacaactggtttgccaaccggcgtaaagaggaa
gccttcaggcaaaagctggccatggactccgttagtctaccgccccacagtatgaaccca
ctgctgtcacacagctcgccacatcataccagcatttcacctcccatgcgttacagccaa
ggccccagtgaggtcacctcctccacggccatcagtcatcacagtagcaacggcatggtg
accagccagtcggtgcttcagcaggtgtctccgggaggattggaccacagccacagtctg
ctgtcacctgacgtcaagatgatttcaggttcaggtggaggacttcctccagtcagtaca
ctgaccaacatccacagttcccatcacagccatcagcagacacagaacctcattatgcct
ctatctggagtcatggccatagcacagagtttaaacacatcacaatctcagccggtgcca
gtgatcaacagcgtggcgggcagccttgcggcgctgcagccggtgcagttttcccagcaa
ctccacagcccccaccagcagagcctgatgcagcagtcctccagccacatgagccagcag
ccgttcatggctactgtcacacactcccacatgtatcctcacaaacaagagcccccacaa
tattcccacccgtcccgtttcccctcggccatggtggtcacagacgccaacagcatcagc
accctcagctccatgtcctcaagcaagacggacggtcccgtaaacaagatggtgcaactt
gggggtctctcctggtgtcctcttcaagcttggtga
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