Sander lucioperca (pikeperch): 116048535
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Entry
116048535 CDS
T07345
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sluc04990
]
116048535 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
sluc04990
]
Other domain-containing proteins
Patched domain-containing proteins
116048535 (ptchd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
116048535
NCBI-ProteinID:
XP_031153520
Ensembl:
ENSSLUG00000016034
LinkDB
All DBs
Position
23:8427219..8441253
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AA seq
994 aa
AA seq
DB search
MLGSAPGFSGRWERLEPRPRARMLRQVLHAGLRTSFHALGRFVASHPVFFASTPVLLSIL
LGASFSRYRVEEDVEGMLAPKHSLAKIEGNLVDSLFPVNRSKHALYSDLQTPGRYGRVIV
TTRKGSVLDPVHLDTILKLHKRIYQMQVTVPATGVNSYNYSFSYLCLPDDKNVCIIDDII
RAMEEIQSARTSNRSVPILRYPITQLADGRQAYIGHQLGGVQGWGPSGAVRGQGTGARGE
GVRSARALQLTYYLQAHGSLMERVASQWEKAFCAELQHFAALHPKLGLYPSTSSSLRTDF
QFSSVLAHRPLLASLGACGVLAVLCCSMRDCVRSKPWLGLLALLSVTLSGLTAAGILNLT
GATYNSTYLGIPFVMLGHGLFGSFEMLSSWRRTREDQHVKERVASVFEDVMLRFSGSTML
HLMTLGLAASPLTNMEAVRLFCRTATLSVTISYVYMLSFYSSCLVFTGYLETGYRHGCFC
RRVPKPDRLDSKPAWYRCLMYTRYQDEAQTTNPPHEVDHSPAQTPNSNLTLTHAHTHPHT
ANNTAAHGHVHVANSTHTHPHPLPHPLPLPLPLTHSTANTEPNPQDSHLLLGCVRRCYGD
WITNTYVKPFVVLLYLVYISFGLMGFLQVTQGSDPSALVAMDTATVLYTRAQQRYFSSYS
PVIGFYIYESAPYWNASVQRDLLEYAKGFQRISWLEAYLNYLSDRNQSTSQPRENFTHTL
RHSFLREPQFAHFADDIIFAERGQGEEPDVAASRIFLVAKTTENKREEMSVLLDTLRRLS
LTSRVRFLIFNPSFVYLDRYAAAVSSPLRHSLLAVLFLLGLSSLAVMEPLVSVWLGLTLL
SVQFGVLGFMTLWGVELDCMSVLCLISALGHSADSSGPLLCGFASGQGDSRTRWVRVALE
RHGVPSLQTLICYSAALVPVSSVRSNLTRTLFRCLTLTAGCSVLHTLAFLPTLLTFLPPS
KSQGQRPEGEGQRQEVECVEMNDSTRVVDQITTV
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgctcggcagtgctccggggttttccggtcggtgggagaggctcgagccgcggccacgc
gctaggatgctgcgccaggtgttgcacgcgggcctgaggacctccttccacgcgcttggc
cggttcgtggcgagccacccggtgttcttcgcctccacgcccgtgctcctctccatcctg
ctgggggccagcttcagccggtaccgtgtggaggaggacgtggagggtatgctcgcgccg
aagcatagcctggcgaagatagagggtaacctggtggacagcctcttccccgtgaaccgc
tccaagcacgcgctctactccgacctgcaaacgccgggccgctacgggcgcgtgatcgtc
accaccagaaaggggagcgtgctggacccggttcatctggataccatactaaagctccac
aagcggatctaccagatgcaggtgacggtcccggccacaggtgtcaacagctacaactac
tccttctcctacctctgtctacccgatgacaagaacgtctgcatcatcgatgacatcatc
cgtgccatggaggagatccaatcagctcgcacctccaaccgctctgtcccaattctgcgc
tacccaatcacgcagctggcagacggacggcaggcgtacatcggccaccagctgggtggc
gtgcagggctggggtcccagcggggcggtgcgaggtcaggggacaggagccaggggagaa
ggtgtacgttctgccagggcgttgcagctcacctactacctccaagcacatggcagcctg
atggagcgggtggccagccaatgggaaaaggccttctgtgctgagttacagcactttgca
gcgttgcaccctaagctggggctgtacccttctacatcctcttctctgagaactgacttc
cagttttcctctgtgctggcacaccgccccctgttggccagcttgggggcgtgcggtgtg
ctggccgtcctctgctgctctatgagggactgtgtgaggtctaaaccctggttgggactg
ctggctttgctgtcagtcacactgtcaggcctcactgctgctgggatactcaacctgacc
ggggccacttacaactctacgtacctgggcatccctttcgtcatgcttggacatgggctc
ttcggctcctttgagatgctgtcgtcatggaggcgaacccgggaggaccagcatgtgaag
gagcgcgtggcgagcgtcttcgaggacgtcatgttgcgtttctccggctccaccatgctc
cacctgatgaccctgggcctggccgcctcgccgctcaccaacatggaggctgtccggctt
ttctgccgcaccgccacactgtctgtcaccatcagctacgtttacatgttgtccttctac
agttcctgtctggtgttcactggatacttagagaccgggtacagacatggctgcttctgc
cggcgagtccccaaaccggaccggctggactctaaaccggcctggtacaggtgtctcatg
tacacgcgctaccaggacgaggctcaaacaaccaacccaccacatgaggtcgatcacagt
cccgcccaaacgccaaactctaacctaactctcacacatgcgcacacacacccacacacg
gcgaacaacactgctgcgcatggacacgttcatgtggctaactccacacacacgcaccca
cacccactcccacacccactcccactcccactcccactcacacattccacagctaacacg
gaacctaatcctcaggactctcaccttttgctggggtgtgtgaggcgttgctatggagac
tggatcactaacacctacgtcaaaccctttgtggttctgctgtatctggtttacatctcc
tttggcttgatgggctttctgcaggtgacccagggttcagaccccagtgcactggttgcc
atggatacagcgacagtattgtacacccgtgcccagcagcgttacttcagctcgtactcc
cctgtcattggattttacatctatgaaagcgccccctactggaatgcctcggtgcagcgg
gacctgttggaatacgccaaaggcttccagcgaatcagctggctggaagcttacctgaac
tacctgtcggatcgcaaccagtccaccagccagccgcgggaaaactttacccacacgctt
cgccactctttcctccgcgagccgcagttcgcccacttcgccgacgacattatatttgcg
gagcgcggccagggcgaggagcccgatgtggctgcgtcacgaatcttcttggtggccaag
acgacagagaacaagcgggaagagatgtcagtgctgctggacacgctgcggcgcctgtcg
ctgacctctcgtgtccgcttcctaatcttcaacccctccttcgtctacctggaccgctac
gctgcagcggtcagctcccccctcagacactcactgctggcggtgctcttcctgttgggt
ctgtcctcgctggccgtcatggagccgctggtgtccgtgtggctgggcctcaccctgctc
tccgtccagttcggggtgctgggcttcatgaccttgtggggcgtggaactggactgcatg
tctgtgttgtgtctgatctcagccttgggacactcggcagactccagtggccccctcctc
tgcggtttcgcctcgggtcagggcgacagcaggactcgctgggtgagagtggcgctggag
agacacggggttccctctctacagacgctcatctgctacagcgccgccctggtgcctgtt
agctctgtgcgctccaacctcacacgcacactgtttcgctgcctcaccctcacggccggc
tgctcggtcctgcacacgcttgcgttcctgcccaccctccttacctttctgcctccctcc
aagagccagggacagcggccggagggagaggggcagagacaggaggtggagtgcgttgaa
atgaacgacagcacccgagtggtagaccagatcaccactgtctga
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