Sander lucioperca (pikeperch): 116048719
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Entry
116048719 CDS
T07345
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116048719 (mms19)
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116048719 (mms19)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116048719 (mms19)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
116048719 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
Adaptin_N
UME
API5
Motif
Other DBs
NCBI-GeneID:
116048719
NCBI-ProteinID:
XP_031153770
Ensembl:
ENSSLUG00000025769
UniProt:
A0A8D0DHX3
LinkDB
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Position
22:complement(7003498..7031890)
Genome browser
AA seq
1032 aa
AA seq
DB search
MMAADSILLLSLVEEFVSGLQDSKAKDTATGVKDGKFTVLQLVEALGQSLTSSQSHTRAR
GVQLLSEVLQECYGSLTETEVEVLIAFYENRLKDHYVITPPVLQGLGALTKCTVLPPGSA
VSMLRSLFQDVHVQSLMLTERACVYKMLINLMATREAELKGLGADFVFGFVQSMDGERDP
RNLLLAFQIAKNIVLRGYDLGKFAEELFEVTSCYFPIDFSPPPSDPHGITKEELIQMLRD
VLTGTPRFAEFLLPLIIEKLDSDVPSSKLDSLQTLTAGVSQYEHKDLAEFLEGLWASLRR
EVFQTASEKIESAGLAALTALTSCLSRSVLSSDSEDSLSTFLDLVLKDCKHHLSEPDLKL
VWPSAKLLQAACSASDRASHIITAAVMPSLIEQYNSRAQCSHRRTLLEVVQRFILSVKTC
RSSDNEESVFLAFRPSLCSMVFSALTETNASLQITANSVLTSLAQQRGLLLDSDIELAVD
HLTRLVLTEDDAEVSLAVVECAGALAALHPAAFITKLIPRLKTEMFSEPMEHDNERAVSE
RRSHHAVRQRCLSALAAVSTQPSVVQESTPVLLEVLSSAHTGGVGFSVEEVVLACRSLQR
IAVQVQDTEETGRCFHDIIIPRLLSLALQAALQGEGSPGCRSPLVEEAVLSAMVPVISTS
CSRLQPTLAGQTASRAVSLFLHGDVSFLPDNSFPSHIQLLKKQRGDSWSQSQMVCLLMGC
VCSLPRSVEVPQIEELLSELEEMSCACSHPLSYTSAAKCFAGLVNKRPQGDSLDSQIQSS
VKRVCRELDSASASVRTQAFTLMIWVAKALLLRYHPLFTTLTDKLFSLLDDADLGPMAAD
GFTLLMSDSADILNRGCHADVRIMYRQRFFSENSDKLVQGFNAAPQEKKPNYLKALSNIV
NTLPKQVQVTELPKLLSLLLEALSCPDQGVQLSTLSCLQPVIMDPPPVLVQQLEALVSRL
LALTSSPAMNVRITSLRCIHAVSRFPEHEVLPFRARVLRALARPLDDKKRLVRSEAVKAR
GQWFLLGSPGGS
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgcggacagtatcttgctgctgtctctggtggaggaatttgtctcgggacta
caggacagcaaggctaaagatacagcaacaggtgtcaaagacggaaagtttacagtacta
cagctggtggaagcactgggacagagtttgaccagctctcagtctcacactcgagccaga
ggagtccagcttctctctgaagttttacaggagtgctatggaagccttacagagacagaa
gtggaagtgctcattgccttctacgaaaaccgcctaaaggaccattacgtcatcacgccg
cctgttttacagggactcggagcgctgacaaaatgtacagtgttgcctcctggctcagct
gtgtccatgctgaggtctttgttccaggatgttcatgttcagtctttgatgctgacggag
agagcctgcgtctacaaaatgctcatcaatctcatggcgaccagagaagccgaactgaag
ggtttgggggcagactttgtgtttggttttgtccaatcgatggacggagagagggatcct
cgcaacctcctgttagccttccagattgccaagaacattgttctccggggttatgatcta
ggtaaatttgcggaggagctgtttgaagtgacgtcctgctatttccccatcgacttcagc
ccccctcccagtgacccccacggcatcaccaaagaggagctgatccagatgctgagggac
gtcctcactgggacgccacgatttgctgagtttctgttaccgctcatcattgagaagctg
gactccgacgttccgagttccaagctggactcgctgcagactctgactgctggcgtgtca
caatatgaacataaggacttggcggaattcctcgagggactgtgggcgtcactgcgccga
gaggtgtttcagacagcaagtgagaagattgagtctgccggcctcgctgctcttaccgca
ctcacttcctgtctgtctcgctcggtcctcagctctgactctgaagactccctcagcacc
ttcctggatctcgttctcaaagactgcaaacatcacctgtctgagccggacctgaagctg
gtgtggcccagcgccaagctgctgcaggccgcctgcagcgcctccgacagggccagccac
atcataacagccgccgtgatgccctctctcattgagcagtacaacagcagagcacagtgt
tcccacaggcgaacattactggaggtggtgcagcgatttatcctgtcagtaaaaacctgc
cggtcttcagacaacgaagagagtgtgtttttagccttccgtccgtctctgtgcagcatg
gtgttttctgctctgaccgagacgaatgccagtctgcagatcacagccaactctgtgctc
acctcactggcgcaacaaagaggcctgctgttggactctgatattgagctggctgtagat
cacctaaccaggctggtgctgacggaggacgacgccgaagtcagtcttgctgtggtggag
tgtgccggagccttagcagcgctgcaccctgcagccttcatcactaaactcatcccaaga
ctaaagacggagatgttttctgagcccatggagcatgacaacgaaagagcagtttctgag
cggcgttcccatcatgcagtgcgccagcggtgtttgtctgctctggccgcggtgtccacc
caacccagtgttgtccaggagagcacgcctgtcctcctggaggtcctcagctcagcacac
acaggtggcgttggtttctcagtggaggaggtggtgttggcgtgtcgcagcctccagaga
atagcagtgcaggttcaggacactgaggagacgggacgatgcttccatgacatcattatc
ccgcgcctgctgtctctggcgctccaggcagcactgcagggcgaggggtcacctggttgt
cgtagtcctcttgtggaggaggcggtcctgtctgccatggtccctgtcatcagcacttcc
tgctccaggctgcagcccacgttggcgggacagacggcgtcgagggctgtgtctctcttc
ctgcacggtgatgtttcctttttgcccgacaactccttcccttcacacatccagctgctc
aagaagcagcggggcgactcgtggagccagtctcagatggtttgcctgcttatgggatgc
gtgtgttcgttacctcgcagtgtggaggtgcctcagatagaggaactgctgtcagagctg
gaggagatgagctgcgcctgcagccacccgctctcatacacctcggctgccaagtgcttc
gctggcctggttaacaagagaccacagggtgattctcttgacagccaaatccagagcagc
gtgaagagagtgtgtagggagttggactctgcgtctgcatccgtacgcactcaggccttc
accctcatgatctgggttgccaaggctctgcttctcagataccaccctctgtttacaaca
ctcactgacaagctcttctctctgctcgacgacgccgatctgggtccgatggcagcagac
ggcttcacgctgctgatgagcgactctgccgacatcctgaaccgcggttgccatgctgac
gttcgcatcatgtaccgccagcgcttcttcagcgagaattcagacaagttggtccagggc
ttcaacgctgcgccgcaagagaagaagcccaactacctgaaggctctgtctaacatcgtc
aatacactgcccaagcaggttcaagtcactgaactgccaaagctcctgtctctgctgttg
gaggccttgtcgtgtcccgaccagggcgtccagctgtccaccctgtcctgtctgcagccc
gtcatcatggaccccccgccagtgctcgtccaacagctggaggctttggtcagcaggttg
ctggccctcacctccagtccagccatgaacgtgaggatcacttcattgcggtgcatccat
gccgtttcccgcttccccgaacatgaggtcttgccttttcgggcccgagtgctacgagct
ctggcccggcccctggacgacaaaaagaggctggtgaggagcgaggcggtgaaggcaaga
ggacagtggttcctgttaggaagtcctgggggaagttga
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