Sander lucioperca (pikeperch): 116048761
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Entry
116048761 CDS
T07345
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116048761 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116048761 (gspt1)
03012 Translation factors [BR:
sluc03012
]
116048761 (gspt1)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
116048761 (gspt1)
Translation factors [BR:
sluc03012
]
Eukaryotic type
Release factors
116048761 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
116048761
NCBI-ProteinID:
XP_031153847
Ensembl:
ENSSLUG00000003439
LinkDB
All DBs
Position
22:complement(6355540..6369883)
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AA seq
598 aa
AA seq
DB search
MDPRDTAPDSWELEEDAEAPAAAAELPTAFAALNVNAKPFVPNVNAPVFVPSFLQASAVE
IPASDGAPDPIASMEVAETAGMNPNCTPGTACSAPVENGGTEADMTTEEETWEQKEEPGG
GGGGGGDEDLSSGGACEGGAARNEDEEMMEEEEEEMPMPKVAPALPDAPKKEHVNVVFIG
HVDAGKSTIGGQIMYLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVE
VGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTR
EHAMLAKTAGVKHLIVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPC
SGLTGANLKEPVTECTWYTGLPFIPHLDSLPNFTRSNDGPVRLPIVDKYKDMGTVILGKL
ESGCISKAQQLVMMPNRHTVEVLSLLSDDVETDDATPGENLKLRLKGIEEEEILPGFILC
SPDNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVQISALICLVDKKTGEKSK
TRPRFVKQDQVCIARLRAAGVICLETFKEFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacacagccccggattcgtgggagctggaggaggatgccgaggccccg
gctgccgcggcagagctcccgactgccttcgccgcactcaacgtcaacgccaagccgttt
gtccccaacgttaacgccccggtgtttgtaccaagcttccttcaagcaagtgccgtagaa
attccggcttcagatggtgcccctgacccaattgccagcatggaggtggcagaaacagcc
ggtatgaatccaaattgtactccaggcactgcatgttcagctccagtggagaacggaggc
acagaggcagacatgaccaccgaggaagagacgtgggagcagaaggaggagccgggggga
ggaggaggaggcggaggagacgaggacctgagttcaggaggagcctgtgaggggggcgcg
gcgaggaacgaggacgaggagatgatggaggaggaagaggaggagatgcccatgcccaaa
gtggctccggcactgccagatgcccccaagaaagaacacgtgaacgtggtctttatcggt
cacgtggatgctggaaaatcaactattggaggacagatcatgtacttaactggaatggtg
gaaaagcgaaccctggaaaaatatgagagagaagcgaaagaaaagaacagggagacatgg
tacctgtcgtgggctctggacacaaaccaggaggagagagacaaggggaagacggtggag
gtcgggagagcttactttgagacggagaagaaacatttcaccatcctggacgctcccgga
cacaagagctttgtccccaacatgattggtggagcgtcacaagccgacctggccgtcctg
gtgatttcagcgaggaagggggagtttgagaccggctttgagaagggtggacagacacgg
gaacatgccatgctggctaaaacagcaggagtcaagcatctcattgtcctggtcaacaag
atggatgaccccactgtcaactggagcctagaaaggtatgaagagtgtaaggagaagctg
gttccctttctaaagaaggtgggctttaaccccaagaaggacatccactttatgccttgc
tccggactcacaggtgccaacctcaaggagcccgtaactgaatgcacctggtacacgggt
ttgccatttattccccatctggacagtttgccaaacttcaccagatccaacgatggacca
gtcagactacctattgtagacaaatacaaggacatgggcaccgttatcctcgggaagctg
gagtctggatgcatcagtaaagcccagcagctggtcatgatgccaaaccggcacacagtg
gaagttttgagcctgctgagcgacgacgtggagacagacgatgcaactcctggggagaat
ctgaagttgaggctgaagggcatcgaggaggaagaaatcctccctgggtttatcctctgt
agcccagacaacctctgccactccggccgcacctttgacgcacagatcgtcattattgag
cacaaatcaatcatttgtcctggttacaatgcagtccttcacatccacacctgcattgaa
gaagtgcaaatctcagccttaatctgtctggtggacaaaaagaccggggagaaaagcaaa
acacgaccacgctttgttaagcaggaccaggtgtgtatcgccaggctccgggcagctgga
gtcatctgcttagagaccttcaaagaattccctcagatgggacgattcacactgagagac
gaaggcaaaactatcgccatcggcaaagtgctgaagctggtgccagaaaaggactaa
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