Sander lucioperca (pikeperch): 116048773
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Entry
116048773 CDS
T07345
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03420
Nucleotide excision repair
sluc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
116048773 (ercc4)
03460 Fanconi anemia pathway
116048773 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sluc03032
]
116048773 (ercc4)
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116048773 (ercc4)
DNA replication proteins [BR:
sluc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
116048773 (ercc4)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
116048773 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
116048773
NCBI-ProteinID:
XP_031153858
Ensembl:
ENSSLUG00000005051
LinkDB
All DBs
Position
22:complement(5893922..5901011)
Genome browser
AA seq
947 aa
AA seq
DB search
MCNFKTLNNQMRAPHCCLSLDFCRFLVTFITGSKRKFGCFRGSCAANMAGPLLEFETEMF
LSLFGCDGLLVVAEGMGIDRILLQFMRVYSEQGSLVLLLNTTTPEQEYFTEQLRAEGVTH
LPRTVTSDVQSTERYNVYTEGGVLFVTSRILVVDFLTDRIPAHLISGILVYRAHKIIESC
QEAFILRLFRQKNKTGFIKAFTDKATSFSSGFCQVERVMRNLFVKKLYLWPRFQASVNTA
LDRHKPDVVELHVSLTPAMRAIQSSILDIMSACLKELKRYNPTLEAEDLSVENTLGNAFE
KTIRHYLDPLWHQLGAKTKALVQDLKVLRVLLLYLTQYDCVTFLNLLESLRSSQKIFGSN
SGWLFLDSSTSMFMNARGRVYRIPESKKKLKVGAEAEKPKSSSALEVKRELVLEKSPKWD
ALTEVLQEIEKENKSSEDEPGRVLICASDDRTCAQLQQYIRRGSDWMLNRLYARTIGKRD
SAAAAAFALDLHKKGNGWPKKGAKGKEPAQKKPTKSTKSKKRPSLTLTQMVGKEEMDEAA
AMGSSGDEDELMGEDGGEEEQLKLDLSSDAYYGVLKEPLTVIHPLKGLTDPHSLTRVLHE
VEPGFVVLYDAELSFVRQLEIYKASRPGKALRVYFLIYGGSTEEQKYLTALSKEKKAFEH
LIREKATMVVPEEREGREDTNLDLARNLEPANATTNTRKAGGQEQPKEPSRVIVDMREFR
SELPSLLHRRGLDIEPVTLEVGDYILTPETCVERKSVSDLIGSLQSGRLYTQCLSMTRYY
KKPVLLIEFDPAKPFSLTARSDYRHEISSNDISSKLTLLTLHFPRLRILWCPSPHATAEL
FLELKKGRSEPDAAAAQAVTAESDMVAESADLYNPGPYDFLLKMPGVNTKNYRVLVKNAD
SLADLAKLSQDKLAEILGNASNAKLLYEFLHNVADVPAPVQKAKQTR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaacttcaaaacattgaataaccagatgcgagcaccccactgttgtctctcgcta
gacttctgtcgctttttggtgacttttatcactgggagtaagagaaaatttggttgtttt
cgtggttcttgtgccgccaacatggcggggccgctgctggagtttgagactgagatgttt
ctgagtctgttcggctgtgacgggctgctagtggtagcggaggggatggggatagaccgc
atcctgctgcagttcatgcgggtttactcggagcagggcagcctggtccttctgctcaac
acaaccacaccagaacaggaatatttcacggagcagttgcgagcggagggtgtgacccac
ctacccaggacagtgaccagcgacgtgcagagcactgagcgctataatgtttacactgaa
ggaggagtgctgttcgtcaccagcagaatcctggtggtcgacttcctcactgaccgcatc
cccgctcatctcatatcaggcatcctggtgtatcgtgctcataaaatcattgaatcgtgt
caggaggccttcatccttcgtctgttcagacagaagaacaagacaggcttcattaaagcc
ttcactgacaaggccacgtccttctcctcgggcttctgccaggtggagcgtgtgatgagg
aacctcttcgtcaagaagctctacctgtggcccaggtttcaagcatcagtaaacacagcg
ctggacaggcacaagcccgacgtggtagagctccatgtgtcactgacgccggctatgagg
gccatccagagctccatcctggatatcatgagcgcctgtctgaaggagctgaaacgctac
aaccccaccctggaggccgaggacctctccgtggagaacacgctcggcaacgcctttgaa
aagaccatccgtcactacctggaccccttgtggcaccagctgggagcaaagaccaaggcc
ctggtccaggacctgaaagtgctgagggttctcctgctctacctcacccagtacgactgc
gtcaccttcctcaatctgctcgagtcgctgcgctccagccaaaagatctttggatccaat
tcagggtggttgttcctcgactccagtacctccatgtttatgaatgccagaggtagagtg
taccgcatccctgagagcaagaagaaactcaaagtgggagcggaggcagagaaaccgaag
tcgtcctctgccttagaggtgaagcgagaactggtgctggaaaagagcccaaagtgggat
gctctgacggaggtactgcaggagattgagaaggagaacaagagctccgaagatgaacca
ggtcgtgtgctgatctgtgccagtgatgacaggacttgtgcccagctgcagcagtacatc
aggcgcggctctgactggatgcttaaccgactatatgcccgcacaatcggtaaacgggac
tctgctgcagccgctgcctttgcacttgacttgcacaaaaagggcaacggctggcctaaa
aaaggagccaagggaaaggagcctgcacagaaaaaacccacaaagtccacaaagagtaaa
aaaaggccatccctgaccctgacccagatggtggggaaagaggagatggatgaagcagct
gcgatgggaagcagtggagatgaggatgaactgatgggggaggacggaggggaggaagaa
cagctgaagctggatttgtcatcggatgcctactatggcgtcctaaaggagccgctgact
gtcatccacccactgaaaggcctcactgacccccacagcttgacgcgggtgctgcatgag
gtggagcccggtttcgtggtgctgtacgacgctgaactcagtttcgtccgccagctggag
atctacaaagctagccggcccggaaaggcactgagggtgtatttcctcatctacggaggc
tcgacagaagaacagaagtacctgacggcgctgtctaaggaaaagaaagcttttgaacac
ctgatcagggaaaaggctactatggtcgtcccagaggagagggaggggcgagaagacacc
aacctggaccttgctagaaatttagagcctgccaatgccaccactaacacccgcaaagca
ggaggccaggagcagcccaaagagccctcacgagtcatcgtggacatgagggagttccgc
agtgaactgccctccttgctgcaccgccgtgggctggacatcgagcctgtcaccctagaa
gtaggtgactacatcctgaccccggagacatgcgtcgagcgcaagagcgtcagtgatctg
attggctcgttgcagagcggccgcctctacacccagtgtctctccatgacccgctactac
aaaaaaccagtgcttctcattgagtttgacccagcaaaaccgttttccttaacggcccgg
tcagattaccgtcatgagatatcgtccaatgatatttcttcaaaactcaccttactcacc
ttgcatttcccccggctccgtatactctggtgcccttccccacatgccactgctgagctc
ttcctggaactgaagaaaggtcgctctgaacccgatgctgcagcagctcaggcagtcaca
gccgagtcagacatggtggctgaatcggcagacctctacaaccccggaccttacgacttc
ctgttgaaaatgcctggggtcaatacaaaaaactatcgtgttcttgtaaaaaatgcagac
agtctggcagatttggccaaactcagtcaggacaagctagcagaaatactcgggaatgca
agcaacgctaagttgctgtatgagtttctgcataatgttgctgatgttcctgctcctgtg
cagaaggccaaacagacacgatag
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