Sander lucioperca (pikeperch): 116048793
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Entry
116048793 CDS
T07345
Symbol
hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116048793 (hfm1)
Enzymes [BR:
sluc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
116048793 (hfm1)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Meiosis-specific proteins
Others
116048793 (hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
116048793
NCBI-ProteinID:
XP_031153882
LinkDB
All DBs
Position
9:34733136..34753198
Genome browser
AA seq
1538 aa
AA seq
DB search
MVDSDDCTLSLDNLFFEKPIVHKVKPLHQEVSPWQLEVPPSLSQVPSTQDMQKEAESLST
LYSFSQIPKTFLPPFKGSAGLVLPSKINSPYSFNNDENISEDTHSGSNRRSDDFWGGEGF
RDDSNGACQSGDETLQDSGHAAISRKGLSLDCSRSPPLRRSLFKVQVLNSGGDSSNTDDL
RSNSSSSQTASRPQTFLSPVTMATVPPPLQPPRATVSQAAPPFSPFPPPPLGSSAASGRP
PQKAAHAEMQGTKRAFVPPMTPQPLHIQGSSGSGVLRPVSEIPAKFRSVFKEFPFFNYVQ
SKALDDVLYTGKNFVACAPTGSGKTVLFELAIIRLLMETPEPWRDVKAVYMAPIKALCSQ
CFESWKKKFGPLGLNCKELTGDTEIDDFFEIQDSHIILTTPEKWDSMTRKWKDNCLLQLV
RLFLIDEVHVVKDATRGATLEVVVSRMKAVHAYRTAQNPETGLSMRFVAVSATIPNPSDI
ADWLSNESGPATYLDFDEGHRPVKLRKVVLGFPCSPNQTEFKFDLSLNYKMANIIQTYSD
QKPALVFCSTRKGVQQAAAVLAKDARFILSIEHKQRLMKYASAILDSKLRDLVMLGVGYH
HAGVDLSDRKSIEEAFTMGDLPVLFTTRTLAMGVNLPAHLVVIKSTMQYVSGSCEEYSEA
DLLQMIGRAGRPQFDTSATAVIMTKIQTKDKYMNLMNGAEIIESSLHSHLVEHLNAEIVL
QTISDVNMALDWIRSTLLYIRALKNPTHYGFSANLDRYGIEAKLQELCLKNLNSLSSIGL
IDMDEDINIKPTEGGRLMARFCVAFDTMKQFSKVAGTENLSDLIELISKSREFSDIQLRV
NEKRPLNTLNRDKNRTTIRFPIEGKIKTSEMKVNCLIQAQLGTIPIQEFGLTQDTGRIFK
NGMRISKCLSEFLSHRSKTGFSAVLNSLILAKCFRAKLWENSSYVSKQLEKIGQSLSTAM
VNAGLTTFSKIEQTHARELELILNRHPPFGNQIRESVIHLPTYEVTLEQLPRYSSATAEI
VVKVNLKNQAQLLSRRTAPDHHYVSLIIGNSDNTVVFLQKLTDSVLLKCGSWSKKIDVAQ
ASKGDEISVNLISSQYVGLDIQQKFNVYYSGARRYGTDNPYNKTYDPTGQRPQPLKPQST
DQDATQREHATSATDQDSGNKRQCNHFCKNKDLCGHDCCKVGVNVARKRSANPESSFFSY
LKDLRTRCDTLAQTPVKRLKMKMSMEESVSVNMHDFAYKPKERLPTVSWCGGSQYEASVR
PCCEIVDLTGEDSVQLPDKVPLADVDRDYDDYVEDVYRKMMEEPVQTPAASQAHPRMWMN
PGTSVGVSQNHKPLLNQINTTSYSKRSTAGSNQGAHYENASSSQIPTVSFDLGNEWDDWG
DFDDENLVHASETSSASCPTNAKVQQPVYYNMPGFAATSAPVLLSHSLKPCKTTARTPLR
WMSPTLNPGIREQGPSLTLRPQNKITLDWNKKRQRIFSEAITINTAENLPKQTETHVTPL
TKSLGFFSTSVPSNTISSVNRSSNSTEEAFLGIFDGIF
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atggtagactctgatgactgcaccttatccctggacaatctgttttttgagaaacccatt
gtccacaaagtaaagccactgcaccaggaggtcagcccatggcagctggaagtgcctcca
tctctttctcaggttccatccactcaggatatgcagaaggaggcagagagtctctccacc
ctatacagtttctcacagatacccaagacattcctgcctccttttaagggatcagctggc
ctggttttaccatcaaaaatcaacagtccttacagttttaataacgatgagaatatttct
gaggacactcatagtggcagcaatagaagatctgacgacttttggggaggtgaagggttc
agggatgactctaatggtgcctgccaaagtggagatgaaaccttgcaggactctggtcat
gcagccatcagcaggaagggtttgtctctggactgcagcagaagcccacctctacggaga
agcttgttcaaggttcaggtgttgaacagtggaggtgactcgtccaacacagatgacctc
agaagcaacagcagcagcagccagacagcatccagacctcaaacttttctcagtccggtt
accatggcgacagtgcctcctcctcttcagccgccacgggcgacagttagccaggcagct
cctcctttctcccccttcccaccccctcctctgggctcatctgcagcgagcggccgaccc
ccgcagaaggcggcacatgctgagatgcagggcacaaagagagccttcgttccgcccatg
acgccgcagccgcttcacatacaagggtcctctgggtctggagttttgcgaccagtttct
gaaatcccagcaaagttcagatccgtcttcaaggagttcccctttttcaactacgttcag
tccaaagcacttgatgatgttctttacacgggtaagaactttgtggcatgtgctcctact
ggatctggtaaaacagtgctgtttgagctggccatcattcgtctgttaatggagacccca
gagccctggagagacgtcaaagctgtctatatggcccctatcaaagctctctgcagtcag
tgctttgagagctggaagaagaagtttggtcccctggggctgaactgtaaggagctgact
ggcgacacagagattgatgacttctttgagattcaggactcccacatcatcctgaccacg
cctgaaaaatgggacagcatgacaagaaaatggaaggacaactgtctgctgcagctagtc
aggctctttcttatcgatgaggtgcatgtggtgaaggatgcgacccgtggtgccacgctg
gaagttgtggtgagcaggatgaaggccgtacatgcctacagaacagcacagaatccagag
acaggcctctctatgaggtttgtggctgtatcagccaccataccaaacccctctgatata
gcagactggctgtctaatgagagtggtccagccacatatctggactttgacgagggccac
cgtccagtgaagctgaggaaggtggtgctgggattcccctgcagcccgaaccaaacagag
ttcaagtttgacctgtcgctcaactacaagatggccaacatcatacaaacgtactcggac
cagaagcctgcattagtgttttgctctacaaggaaaggagtccagcaggcagctgcagtt
ctggccaaggatgctcggttcattttgagcattgaacacaagcaaaggctgatgaaatat
gcaagcgctattctggattcaaaactgagagatctggtgatgttaggagttggttaccac
catgcaggagttgacttgtctgataggaagtcgatagaagaggccttcactatgggagac
ctgcctgtcctctttaccaccaggactctggccatgggggtgaacctgccagctcatctg
gtggtgatcaaatctaccatgcaatatgtgtcaggctcctgtgaggagtacagcgaggct
gacttgctgcagatgataggccgagccggaagaccacaatttgacacttcagcgactgca
gtgatcatgaccaagattcaaaccaaagacaagtacatgaatcttatgaatggggcggaa
atcattgagagcagtttacacagtcacctggtggagcacctgaatgcggagattgttctc
caaaccatcagtgatgtgaacatggctctggactggatacgctccaccctcctctacatc
agagccctcaagaaccccacacactatggtttctctgccaacttagacagatatggaatt
gaagcaaaattgcaagagctgtgtctgaagaacctcaactctctgtcctccattggtctg
atcgacatggatgaggatatcaacatcaaaccaacagagggcggcaggttgatggctagg
ttctgtgttgcctttgacaccatgaaacagttcagcaaagtggctggcaccgagaacctg
tctgacctgattgagttaatttcgaagagcagagagttcagcgacattcagttgagagtg
aacgagaagaggcccctgaacaccttgaacagggacaagaacaggaccaccatcaggttt
cccattgagggaaagatcaaaaccagtgagatgaaagtgaactgcttgattcaggctcag
ttgggtaccatcccaattcaagagtttggacttacacaggacacaggaaggatcttcaag
aatgggatgcggatcagcaaatgcctgtcagagtttctgagtcaccgatccaagactgga
ttctctgctgtgctcaactccctgatcctggcgaagtgcttcagagccaagctttgggaa
aactcgtcctatgtttccaaacagctggagaagataggtcagagcctgtcaactgccatg
gtgaacgctggactcaccactttcagcaaaatagagcaaacccatgccagagagcttgag
ctgattctcaacagacatccaccatttggcaaccaaattagagaatctgtcatacacctc
ccgacgtatgaagttactttggagcagcttccgaggtatagctctgctacggcggagatt
gtggtgaaggtgaaccttaaaaaccaagcacagctgttgtccaggagaacagctccagac
caccactacgtctctctgattatcgggaactctgacaacaccgtggtcttcctacagaaa
ctcacggactctgtgttgttgaagtgtggcagctggtcgaagaagattgacgtggcacag
gcctcaaaaggagacgagatcagtgtcaatctcatcagctcacaatatgtgggcctggac
atccaacagaaattcaatgtctactactctggagccaggaggtatggaactgataatcca
tacaacaaaacgtatgatccgactggacagaggccgcagccactgaaaccacagtctaca
gatcaggatgcaactcagagggagcatgccacatctgctacagaccaagattcaggcaat
aaaagacagtgcaaccacttctgcaagaataaggatctctgtggccatgactgctgtaaa
gtaggtgtaaatgtggcacggaagaggtcagcaaatccagaatccagtttcttttcctat
ttgaaagacctgagaaccaggtgtgacacactcgcacagactcctgtcaaacgactcaag
atgaaaatgagcatggaggagtctgtgtctgtcaacatgcacgactttgcttacaaacct
aaagagaggctacctactgtttcctggtgtggaggaagtcaatatgaagcttcagtgaga
ccttgctgtgagatcgtggatctgacgggagaagacagcgttcaactgccagacaaagtt
cctctggccgacgttgacagagattatgatgactatgtggaggacgtgtacagaaagatg
atggaggagcctgtccaaacacctgctgcgtctcaggctcaccctcgaatgtggatgaac
ccaggaaccagtgttggtgtgagtcagaaccataaaccgcttctaaaccagatcaataca
acctcttactcaaagaggtctactgcgggatcaaaccagggcgctcactatgaaaatgct
tcatcctcacaaatcccaactgtcagctttgacctgggaaatgaatgggacgactggggc
gactttgatgacgagaacttggtgcacgccagcgagacgtcatcggcctcatgtccaact
aatgctaaagtccagcagcctgtttactacaacatgccaggctttgctgctacatctgca
ccagtactcctcagtcactcactcaaaccctgtaaaaccactgccagaacaccactgagg
tggatgtcaccaactttaaatcctgggatcagagaacaaggaccctcactgaccctcaga
ccacagaacaaaatcacactggactggaataaaaagagacaaagaatattcagtgaagcg
atcacaataaatactgcagaaaatctcccaaagcagactgagacccacgtgaccccactt
acaaaaagtttgggtttcttctcaacgagcgtcccatccaacaccatctcatctgtcaac
agaagcagcaactccacagaagaagcttttcttgggatatttgatgggatattttag
DBGET
integrated database retrieval system
