Sander lucioperca (pikeperch): 116048808
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Entry
116048808 CDS
T07345
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116048808
Transcription factors [BR:
sluc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116048808
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SSDB
Ortholog
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
116048808
NCBI-ProteinID:
XP_031153913
LinkDB
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Position
9:34577941..34579470
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AA seq
251 aa
AA seq
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MNVSVLEMAKPLDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSDSE
KRPYIDEAKRLRAQHMKEHPDYKYRPRRKAKSLLKRDRFVFPLPSLLGDAAEHLKGFPMD
SFLVPGDKARAFLAPVSSPSSFSLLEPVAQFSTGAVQRMAEIPHALAASALPYSAHTFGY
QTGGIGGLACHGQHTHTHTHPHPSSSPGYVVPCNCSAWSAASLQPQLAYILFPGGMAKNG
MDSYTSPSSSV
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgtcagttcttgagatggccaaacctttagatcacatcaaaagacccatgaat
gctttcatggtgtggtccagaggccagaggaggaaaatggcccaggaaaacccaaagatg
cacaactctgaaatcagcaagaggctcggcgcggagtggaagctgctgtccgactccgag
aaacgtccgtacatcgacgaggccaagaggctgcgggctcagcacatgaaggagcacccg
gactacaagtacagaccacggcgcaaagccaagagtctcctgaagagggaccgttttgtt
ttcccgctgccgtctttacttggggacgcggcggagcatttgaagggatttcccatggac
tcctttcttgtccctggggataaagccagagctttcctcgctcccgtctcatccccctct
tccttctcgctgctggagccggtggcgcagttcagcaccggagctgtccagcggatggcg
gagataccgcacgctctggccgcaagcgctttgccctacagcgcgcacacgttcggatac
cagactggagggattgggggtctggcttgccacggacagcatacccacacccacacccac
ccccacccgtcctccagcccgggatacgtggtgccgtgtaattgtagcgcctggtctgct
gccagtttacagcctcagttagcctatattctcttccctggagggatggccaagaacggc
atggactcgtacacttcccctagctccagtgtgtga
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