Sander lucioperca (pikeperch): 116048827
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Entry
116048827 CDS
T07345
Symbol
ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116048827 (ncstn)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
116048827
NCBI-ProteinID:
XP_031153946
Ensembl:
ENSSLUG00000019384
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Position
9:complement(34024141..34046802)
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AA seq
701 aa
AA seq
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MDLLSNKWIVNLLVCCLFIGVGCNSVEKKIYVHLNYTVPCVRLLNATHQIGCQSHLSGNV
GVLHVLESEENVDWVLRSGPNPPYLVILESPLFTRSIMMKLKNGSSRVAGVAVVAPSANP
LEGVSPHTTCPNENTGVYTENYDPSLAHCNVTVWNPLGSGLSYEQFDFPIFSLKDDNDTQ
VIRQCYMDHNRAVNGSTPQYPLCAMQLYSHMSAVTDTATCMRRNDINFSISPEMVCDPLG
DYNVWASTRPINNTAKGHKMWESVVIAAARLDSRSFFFEVAPGAESGVSGFVTLLAAAHA
LRNATQEAPPNRTILYTFFQGETFDYIGSSRMVYDMQNNNFAVDLDNVHSVLEIGQVGLR
ADSRLWLHSDPVSRKNDSVNAEVRKLIESLQTAAKGLNVSVNEPGFSQPLPPSSFQRFLR
ARPIPGVVIEDHQSAFTNRFYESMYDNAEYLNISYPPNLTPEEQLVFVTDTAKALTEVAT
VVARALYIQAGGAESQLEGINADPQIVTRMLYGFLIRSNNSWFQQRIPPDFMSHLTDRPT
NFYVGVAQQRSELTHLVQYLLANLTGSTANISQDNCQNQREDEKDKESKHMYSYVWVQGA
APPNSTKREGFCVRSTVRLSKALSPAFDLRDYTSKNYSTWTESRWKSIKGRIFLVASHDL
EMLTLGVGVAVLLASLLLTYIMSSKADILFSSGREPANATY
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggatttgctgtcgaacaaatggatcgttaatttactagtttgttgtcttttcatcggt
gtcggctgtaattcagtggaaaagaagatttatgtgcatctcaattacactgtcccatgt
gtacgactgctcaatgcaacacatcaaataggctgccagtcccatttgtcaggtaatgtg
ggagtgctccatgtgctcgagtccgaggaaaacgtggactgggtcctgcgctctggtccc
aatcctccttatctggttatcctggagtccccactctttaccagatccatcatgatgaag
ttgaagaacggctccagcagggtggctggcgttgctgttgtggcgccgagtgcaaatccg
ctcgagggcgtctctccacacaccacctgtcccaacgaaaacacaggcgtgtatacagaa
aactacgatccatccttggcccattgtaacgtgaccgtgtggaaccctttgggaagcggt
ttgtcctacgagcagtttgacttccccatcttctctttgaaagacgacaatgacactcag
gtcatacggcagtgttacatggaccataaccgcgctgtgaacggcagcactcctcagtac
ccgctgtgtgctatgcagctctactcccacatgtccgcagtcaccgacacggccacctgc
atgaggagaaatgacatcaactttagcatcagcccagagatggtctgtgacccattgggt
gactataatgtttgggcctccaccaggcctattaacaacacagccaagggccacaagatg
tgggagagtgtggtcatagcagcagccaggttggacagcaggtcttttttctttgaagta
gctccaggagcagagagtggagtctctgggtttgtcactctgctggccgccgctcacgct
ctgcgaaatgccacccaggaggccccacccaaccgcaccattctctacaccttttttcaa
ggggaaacctttgactacatcggcagttcgaggatggtgtacgatatgcagaacaataac
tttgccgtggacttggacaatgttcactcagtattggagataggacaggtgggacttcgt
gctgactccagactgtggcttcactctgatcctgtgtctaggaagaacgacagtgtcaat
gcagaggtgaggaagctcattgaaagcttgcaaacggctgccaaaggtttgaacgtctcg
gtgaacgagcccggtttctctcagccgctcccgccctcgtccttccagcggttcctgcga
gctcggccaatccctggtgtcgttatcgaggatcaccagtctgctttcaccaacaggttc
tacgagagtatgtacgataatgcagaatacctgaacatatcttacccgccgaacctgacg
ccagaggagcagctggtgtttgtcactgacaccgctaaggctctgactgaggtggccacc
gtggttgcccgggctctgtacatacaggcaggaggagctgaaagccagctggaaggcatc
aacgcagaccctcaaatagtgacccggatgctgtacggtttccttattcggtcaaataac
tcctggttccagcaacgaatcccccctgacttcatgagccacctaactgacaggcccaca
aacttctacgtgggcgtggcccagcagcgcagcgagctgacccatctggtccagtacctg
ctggctaacctgaccggtagcaccgccaacatcagccaggacaactgccagaaccagaga
gaggacgagaaggacaaagagagcaaacacatgtactcctacgtgtgggttcaaggcgcg
gcgcctcccaacagcacaaagagggagggtttctgcgtgcgctccacggtccgtctctcc
aaagcactgtccccagccttcgacctgcgggattacacctccaaaaactattcgacgtgg
acggagtcccggtggaagtccatcaaaggacgcatattcctagtggcgagtcacgatctg
gagatgttgacgctgggcgtgggtgtcgctgtgctgctagcatccctgctgctgacgtac
atcatgagctcgaaggccgacatcctcttcagctcggggagggagccggccaacgccacc
tactga
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