Sander lucioperca (pikeperch): 116048837
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Entry
116048837 CDS
T07345
Name
(RefSeq) heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1
KO
K12884
heterogeneous nuclear ribonucleoprotein C1/C2
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116048837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116048837
Spliceosome [BR:
sluc03041
]
Common components
Common spliceosomal components
hnRNP proteins
116048837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Cwf_Cwc_15
RRM_5
PPP4R2
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
116048837
NCBI-ProteinID:
XP_031153964
Ensembl:
ENSSLUG00000018808
LinkDB
All DBs
Position
9:complement(34352236..34383251)
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AA seq
317 aa
AA seq
DB search
MDRSPTTASLMAASNVTNKTDPRSLNSRVFIGNLNTLLVTKGDVEAIFSKYGKIVGCSIH
KGYAFVQFANERNARSAVDGEDGRMIVGQVLDINLAGEPKPHRSKTGKRSAGDMYSSSSF
ELDYDFQRDYYDRMYSYPSRVPAPPPPPLSRAVIPSKRPRVSLSGGSSRRTKSSFTSSSK
RTSSSRTMKVDELQAVKRELTQIKSKVDDLLDSLERMEKDHSKKSEAKSVKTEPGEVTSP
PHPSNKDDGSKRERESQVINDSEEDDDGEDEGDLLEEEEEMKSQEREDDMDDDEEEEEGE
HVEGDDDGDSVNGEEVL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttcacccaccaccgccagcctgatggccgccagcaacgtcaccaacaagacg
gacccacgctccctcaactcccgggtcttcatcggcaacctcaacaccctgctggtcacc
aagggcgatgtcgaggccatcttctccaaatacggcaagatcgtgggctgctccatccac
aaaggctacgccttcgtccagttcgccaacgagaggaacgcccgatctgccgtcgacggc
gaggacgggaggatgattgtcggacaagtgcttgacatcaacctggccggagaacccaaa
ccacacaggtcaaaaacaggcaaacgctcggctggagacatgtacagcagttcctcgttt
gaactcgactatgactttcagagggattattacgaccgaatgtactcgtacccgtcccgt
gtgcccgctccccctcccccccccttgtcccgtgccgtgatcccgtccaagcggccacgg
gtcagcctgagcggaggaagcagccggcgaaccaagagcagcttcacctcttcctccaag
aggacttcctcctccagaaccatgaaagtggacgagctgcaggctgtcaagcgagagttg
acccaaatcaaaagcaaagtggacgacctgctggatagcctggagcgcatggagaaggac
cacagcaagaagtcagaagctaagagtgtaaaaacggagccaggcgaggtgacttcacct
ccgcacccaagcaacaaggatgacgggtcaaagagagagagggagagccaggtgatcaac
gactcagaggaggacgacgacggcgaggacgagggagacctgctggaggaggaggaagag
atgaagagtcaagagagggaggacgatatggacgacgatgaggaggaggaggaaggcgag
cacgtggaaggtgacgacgatggcgacagcgtcaacggcgaagaggtcttgtag
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