Sander lucioperca (pikeperch): 116048881
Help
Entry
116048881 CDS
T07345
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sluc00535
]
116048881
04091 Lectins [BR:
sluc04091
]
116048881
Proteoglycans [BR:
sluc00535
]
Cell surface proteoglycans
Others
116048881
Lectins [BR:
sluc04091
]
C-Type lectins
Others
116048881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
DUF4381
TMEM154
Motif
Other DBs
NCBI-GeneID:
116048881
NCBI-ProteinID:
XP_031154028
LinkDB
All DBs
Position
1:13686443..13707293
Genome browser
AA seq
2553 aa
AA seq
DB search
MGSFVADLFLLLLISAGHVYGVSFYGDGYIHLRTVEASIQTLLHVRFRTSSQAGMLFLAA
GRRDFLLLELISGRLQVRLDLGSGERSLRSEKGIHLSDLAWHSIELTHNRHNVNMTLDRN
FHTSFRMPGPDLELSVENGLFVGGAAGLNHPYLFNISTGFRGCIDEVVFNEHNLLSSLRP
YSGYKSVHEVSLGCSPQFSATEEDSVSFFSSKAFITLPPWEGPQEGVFECELYPSAREED
GMVLFSSGNQGGFVAIEIKDGNLVATVGNGEGSKTELRSLTHVHSNHTWYPIQLHLLPNS
VQLKVGEELIKATLSLELQVIQLKGPLFLGGLDEEAQGEAQRAGLMSAVSGGQKAGQGVS
FKGCLREIRVNTQRTGLPHAAITKDITVGCNRGQATNALATTSPTNRPEFDVTTTRPITN
NKKNPNFLMLRKLEVVEGGWASLEPKHIRVNLDFRKLGIHPSQLMFRIEGQPVHGQLRLD
LSPDPNGMPGKGQERTITIGAEEVDRTFSMLDLWQGRVMYVHSGSEDQYDFFMFSVFSSS
KKKLPVFLKSNRLHRFDISISPANDAPVLSLPEGNLFTLLEKSKRQLTSDVVRVSDPDSS
PAELMFSALGNLNTEVGHLEHHDYPGRAINLFSLNDLEGGKISFVHTGVPHSRLALRVSD
GLKLSNTVVLRIMAVPLEHKLVNCTGLEVNQGGAAIITTIHLAVQVNVDDQAVKIRYDVT
ELPQYGELQRLHSSGDWKRTTYFSQKLLEKERIRYLSTYHGLQTQNNITDYFKCKISIGS
TAAKEVVFLIRVHWIQFKVTRSKMEVNGVQTAAVTPEDLHVISKGVKLNESDLYFRLLTV
PNKGQLFLDNKVLVRNSTFSQKNITDGLMKYELLNMLHDDTRDTFSFQVFSAHANSTTYD
FRINIHAESTVITVVNKGLSTLEGGSKVINKEILFTHTASNQEVHYSITVSPRHGQIRRI
NLSNSTSINDNIVTFTNQDIIEERIMYVHDDSETKQDSFNFQIMVYKPHKRTSKKEDRNI
VEHTFNISVQLVNDQRPVRVVDKVFHVARNGQRLVTLTDIRYRDDDSDFQDNWLVYTRRG
IPMGELVLASDTSHKLYEFTQRDLQQKKVLFVHRGVSFGRFVLFVSDGKHYVSTLLEVMA
QDPYLQVENNTGIVVKRGGLTTMTSANLSIFSNLDIRDPQEVTFEVFLPPKHGVLCFNNG
SCETVTGAKPISIFTQQDLVAGRLAYRHDSSHELSDGFNVTTTARDKSTDGGMDRERREV
HLDIGVMVKIYLESHQRPPTVISNRPVVVAEGQNVSISKEHLEVVHEDSQPSEIVFTVQS
HPTLGFLQRIPPNDKHKNNNGEQQRLYQVQPTGFTEQPTNSFTQEDLNQGMIIYHQQSAG
HTNDSVLLEATNGLTKVGPIRLEIDIIPMLLPLQVSDLTLDEGSSLPLTSDIIKVANHHF
SGMNFLYQVIVPPRHGHLEHSRIPGMPITAFTHTEVEREYISYIHDGSDTLRDNFTIVAN
QTEIRKHSLPCTAHISVIPVNDETPVVTTNKGLKVWVGSVTEITKDDLRAEDLDTPESEG
LEFIITPPSNGHLALKSAPSRHILNFTQNHIETRQLMFVHSGASSGGFHFQVNDGVNFTP
RQIFSTTAYSMGLTLQRNHPMEVYPGSVTPISELELQAITNDVSDIRRNPSVVFAVTTLP
KLGSLVRRMPDNSTQNISTFTQSMVNDGVILYDQNKPQSVGWSAADSFSFTVSSPPAFLP
PHIFTILISYQANKHHNSAQHKTRLLNNAGAVVAEGGRVTIDRSKLDASNLLGKVPEPHR
KAHQILYRVISLPQHGTLSIRGHNLTRNQPDFSQVTLNKYGITYVHDDSETTSDSFTFRA
WVALLDLSSSSLSAFSSDSSSFSHLYSALSSSPSPLDVVSPRRAMDRLAVTETFSIAVTP
VNDQPPLIRSRARSMKVVVGERVVLGPDYLQVEDHDTPPEELHYLVISKPNNGYLTLGER
PEPVTSFTQYDVNHGRLHFIQQGEPSTGVFYFNVTDGHHRPLYKLFSLEVMKPSVSMVNN
TGLSLVQGRTAVILTTNRFAAQTNSRTQAIITYTVTTHPRHGRIAINDQEVTTFSHEDLE
FGRVVYHMTDFSESEDSFQVSVSASSPGVAYGNVTGQTVNVTVRALIYLREPVRVPSGIA
VKLGKAMIDASELARISRADPVFEVLSPPKHGKLVKMTYDPNRASQVLTSFTFRDVVQGR
VAIEETLSDGDSQLHDNKSALTTVRGHAPATPLNDSFIFLLKAGNVQPAKGELHFTILPH
HQMHHGPSSLNTEGASHEHTTTWLPTHNKTTTGRGGGRGGPTTLTEVGVGLPPHILSHKN
HNRTQHKLRPNTRWGNHTSSGSHGGRSGSHSHVPQPHTPSVSDKHGPAIPPDIHPVHVEV
LPRPASDPLHIILPLLACLFLIIILVILILVFRRRKEKQARLRLLQQLATVALHTEDSPY
LGRAERSVAMPSVVVTPLCPVSCPSSPRVLRSPRRSLAPGMTFWGPFEADGAGGDGNIRG
DNNNERGNVTAGFRTSLRSRSLTPTLKDNQYWV
NT seq
7662 nt
NT seq
+upstream
nt +downstream
nt
atgggaagttttgtggctgacctgtttctgctcttgctcatttctgcaggacacgtttat
ggagtgtcgttctacggtgatggctacatccacctgcggacagtggaggcgtccattcag
acgttgctccatgtacgatttcgaacctccagtcaggcggggatgctctttctggcagct
ggacgcagagatttcttgctgctggagctgatctctgggcgcctgcaggtacgtctggac
ctgggctcaggtgagcgttcactacgctcagaaaagggcatccatcttagcgacctggcg
tggcactccatagagctgacacacaaccgccataatgtcaatatgaccctagaccgaaac
tttcataccagcttccgtatgccaggaccagatctggagctcagtgtcgagaatgggctt
tttgttggcggggcagctggactgaaccacccatacctttttaacatctccactgggttt
agaggatgcatagatgaagttgtgttcaatgaacataacctgttgtccagcctaaggccc
tattctgggtacaagagcgtccacgaggtatctctgggctgtagtccacagttttctgca
acagaagaagattctgtcagctttttcagctctaaagcatttatcactctcccgccttgg
gaggggccacaggagggggtgtttgaatgtgaattatacccctctgcaagagaagaagat
ggcatggtcctctttagctctggtaaccagggagggtttgttgccatagagatcaaagat
ggtaacctggtggcaacagtaggaaatggagagggcagtaagactgagctgcgttctcta
acacatgttcacagcaaccatacctggtaccccatccagctgcacctgctgcccaacagc
gtccagttaaaggtgggtgaggagttgatcaaggccaccctgagtctggagctccaggtt
atccagctcaaagggcctcttttcctgggaggactggatgaagaagcccagggagaggca
cagcgagctgggctgatgtccgctgtgtctggggggcaaaaggctgggcagggagtctcc
tttaaaggctgcctccgagaaattagggtgaatactcaaagaacaggccttcctcatgct
gccataaccaaggacatcactgtgggttgtaatagagggcaagctacaaatgcactggcc
accactagcccaacaaatcgtcctgagtttgatgttacaaccacacgaccaattaccaac
aataagaagaaccctaactttctgatgctgagaaagctagaagttgtggagggaggctgg
gcatcactggagcccaaacacattagggtgaatctggattttcggaaattgggcattcat
ccatcccagttgatgttccgcattgaggggcagcctgtccacggccagctccggctggac
ctcagtcctgaccccaatggaatgccgggcaaagggcaggaaaggactatcacgatagga
gcagaagaggtcgaccggactttcagtatgctggacctgtggcagggtcgggtgatgtac
gttcacagtgggtcagaggaccaatatgacttcttcatgttttcggtcttctccagcagt
aagaagaagcttcctgtatttctgaagagcaaccgcctgcatcgatttgatatcagcatc
agtcctgctaatgatgcgcctgtgctcagcctgccggagggaaaccttttcactctactg
gagaagtccaaaagacagctgacttcagatgtggtgagagtgtcagaccctgacagcagt
cctgcagagctgatgttcagcgccctgggaaacctcaacactgaggttggacatcttgag
caccatgattaccctggcagggccattaacttgttctctctcaatgatctggaggggggt
aagatcagctttgtccacactggggtcccccactctcggctggcactcagagtcagcgac
ggcctgaagttgagcaacacagtagttttgaggattatggcggtgccactcgaacacaaa
ctggtgaattgcactggactggaggtgaaccaaggcggggctgccatcatcacaaccatt
caccttgcagtacaagttaatgtggatgatcaggcagtgaaaatccgctatgatgttaca
gagttgccacaatatggtgagctccagcggttgcactcaagtggcgactggaaacggaca
acatacttctctcagaagcttctcgaaaaagaacggatccgatacctcagcacttaccat
ggccttcagactcagaacaacatcactgattacttcaaatgtaagatcagcatcggttcc
acggctgcaaaggaagtcgttttcctaatcagggtacactggatccagtttaaggtcaca
cgcagcaagatggaagtcaatggtgttcagactgctgctgtcactcctgaggacctccat
gtgatttctaaaggtgttaaacttaatgagagtgacctctattttaggctcctaacggtg
ccaaataaagggcagcttttcctggacaacaaagttctagtaaggaactcaacctttagc
caaaagaatatcacagatggcttgatgaagtacgagctcctcaacatgctgcacgatgac
acaagagacacgttcagctttcaggtgttttcagcgcatgccaactcaacaacttacgac
tttagaataaacatccatgccgagtcaaccgtcatcaccgttgtaaacaaaggcctttca
accctggaaggaggaagtaaagtcatcaacaaagaaatcctgttcacccacacagcaagt
aaccaggaggtccactacagcattacagtgagccctaggcacgggcagataagaaggatc
aacctttccaactcaacttccattaacgacaacattgtgacattcaccaatcaggatatc
attgaggagaggatcatgtacgttcatgatgacagcgagaccaagcaggattccttcaat
tttcaaattatggtttacaaaccgcacaaacgcaccagcaagaaggaggatagaaacata
gtagagcacacctttaatatctctgtgcagctcgtcaacgatcagagacccgtcagggtt
gtggataaagttttccatgtcgctcgcaatgggcagaggttggtgacgttgactgacatt
cgttaccgggacgacgactcagactttcaggacaattggttggtgtacacgcggaggggg
attcccatgggagagctggtgctggccagcgatacgagtcacaagctgtacgagttcaca
caacgggacctccagcagaaaaaagtgttgtttgtccacagaggagtgagttttggccgt
tttgtgcttttcgtatcagatgggaaacattatgtttcaacgctgctggaggtgatggcg
caggatccttaccttcaggtcgagaacaacacaggcatcgtggtcaagcgaggtgggctc
acaaccatgacctctgctaacctcagcatcttcagcaaccttgacatccgagacccacag
gaagtgacatttgaggtcttccttccacctaaacacggcgtgctctgctttaataatggc
agttgtgagactgtaacaggcgcaaaaccaatttcaatattcacccagcaagatttggtg
gcagggcgcctggcgtatcgccatgacagcagccatgagttgtcagatgggttcaacgta
acgacaacagcaagggacaagagcacagatggaggaatggacagagagagaagggaggta
catttggacattggagtgatggtaaaaatctaccttgaaagtcaccagaggccaccaacg
gtcataagtaaccgtccagtggtagtggcggagggacagaatgtatccataagcaaggag
cacttagaggtggttcatgaggacagccagccctcagagatagtttttactgtccaaagt
catcccaccctgggcttccttcagaggattccccccaacgacaagcacaagaacaacaat
ggagaacagcagcgcctctatcaagtacagccgactggcttcacagagcagccaactaat
tccttcacccaggaggacctgaaccagggaatgatcatctaccatcagcagtctgcagga
cacaccaacgactctgttctattggaggccaccaacgggctcacaaaggtcggacctatc
aggctggagattgacatcatcccaatgctgctccctctacaggtgtctgacttgaccctt
gatgaggggtcgtccctgccgctgacttccgacatcatcaaggtggccaatcatcacttc
tcagggatgaacttcctgtaccaggtcatcgttccaccgcgacatggacacttggagcat
agccggatcccgggaatgcccatcactgctttcactcacactgaggtggaacgtgagtac
atctcctatatccatgacggcagcgacacactgagagacaactttaccattgtggctaat
cagacggaaatcaggaagcacagtctgccctgcaccgctcacatcagtgtcatacctgtc
aatgatgagactcctgttgttacgaccaataagggtctgaaggtgtgggtgggttcagtg
acagaaatcaccaaagatgatctcagagcagaggacttggacactcctgagtctgagggg
ctggagttcatcatcacaccacccagcaacggccacctggccctgaagagcgccccctcc
agacacatcctgaacttcacccagaatcacatagaaaccagacaactgatgttcgtgcac
agcggtgcttcatcgggtggctttcacttccaggtgaacgacggcgtgaactttacccct
cgccagatcttcagcacaactgcctactctatgggcctcaccctgcagagaaatcatccc
atggaggtctacccaggctctgtgacaccaatctctgagctggagcttcaggccataacc
aacgatgtcagcgacatcagaagaaacccctcggtggtgtttgcagtgaccactcttcct
aaacttggcagcctggtccgacgtatgcccgacaactctacacaaaacatttccacattc
acacaaagcatggtgaatgatggagttatcttgtacgatcagaacaagccacagtcagtg
ggatggtcggcagcagactctttctctttcaccgtgtcctcccctcctgctttccttcct
ccgcacatcttcaccatcctaatctcctaccaggcgaacaaacatcacaacagcgctcaa
cacaagaccagactactgaacaacgcaggtgctgtggtggccgagggaggcagggtgacg
attgacaggtcaaaactcgatgcctccaatctccttgggaaggttccagagccccaccgg
aaagcccaccaaatcctgtatcgtgtgatttccctgccgcaacacgggactctgtctata
cgaggacataacctcaccaggaaccaacctgatttctcccaggtcaccctaaacaagtac
ggcatcacatacgtccacgatgactcagagacgacgagcgacagcttcactttccgggcc
tgggtggctcttttggatctttcctcctcttccttgtctgccttttcctccgattcctcc
tccttttcccatctctattcagccttatcatcctccccttcgccattagatgtggtttct
cctcggcgtgccatggacaggctggcggtgacggagacgttcagcatcgcggtgacaccg
gtcaatgaccagccgccgctcatcaggagcagagcgcggagtatgaaggtggtagttgga
gagagagtcgtactaggaccagactacctgcaggttgaggatcatgacacccctccagag
gagctgcactaccttgtgatcagtaagcccaacaacggctacctgacgctaggggaaaga
ccggagccggtgacctccttcacccagtacgacgtcaaccacggccggctgcactttata
cagcagggagagccctcaacaggcgttttctacttcaacgtaaccgacggtcatcatcgt
ccgctctacaaactgtttagtttggaggtgatgaagccctctgtctccatggttaacaac
actggcctgtcactggttcaaggcaggactgctgtgatcctgacaaccaaccggtttgca
gctcaaaccaacagtcgcacgcaggccatcatcacctacacggtcaccacacaccctcgc
cacgggcgcattgctatcaacgaccaggaagtcacaaccttctcccatgaggacctggag
tttggccgcgtggtctatcacatgactgatttcagcgaatccgaggacagcttccaagtc
tcagtttcagcctcgtcccccggtgtggcctatggaaatgtaacaggacagacggtgaat
gtaactgtgcgcgctctgatctacctgagggagccagtgagagtgcccagtggtatcgcg
gtgaaactggggaaagccatgatcgacgcgtctgagctggcaagaatcagccgagccgac
cctgtttttgaggttctgtctccaccaaaacatgggaaactagtcaagatgacctatgac
cctaaccgagcatcacaggtcctgacgtcgtttacgttcagagatgtggtgcaaggccgc
gtcgccatcgaggaaactctcagcgatggtgacagccagctgcatgacaacaaatcagca
ctcacaacagttcgaggccacgcccctgccacacctctcaatgattctttcatcttcctg
ctgaaggctggaaacgtccaaccggcgaagggcgagcttcacttcaccatcttaccccac
caccagatgcatcatggtccgagcagtttaaatacagagggcgcaagtcatgaacacacg
acaacctggcttccgacacataataagactactaccggaagaggaggtgggcgagggggt
cccacgacgctcaccgaggttggtgtgggtttgcccccccacattttgtcacataagaac
cacaacaggactcagcacaagttgaggcctaacacccgctgggggaaccacacaagcagt
gggagtcatggaggcagatcagggagtcatagtcatgtcccacaaccccacactccctct
gtctcagacaagcacggcccagcgatccctcctgacatacacccggtccacgttgaggtg
ctccctcgccccgcttccgaccctctccatattatcctgccgctgctggcctgtttgttc
ctcatcataatcctcgttattctgattctggtgttccgccgccgcaaggagaaacaggcg
cggctgcggctcctccagcagctcgccacagtggcgttacacactgaggacagcccttac
ctgggccgggcggagcgcagcgtggctatgccctccgtggtggtcaccccgctgtgccct
gtaagctgcccttcctcacccagggtactcagaagtcccagaaggagtctggcccctggg
atgaccttctgggggccatttgaagctgatggagcaggtggtgatgggaatattagaggt
gataacaataatgaaagaggtaacgtcactgcaggtttcaggacctctctgagatctagg
tcccttactccgactcttaaagacaaccagtactgggtttga
DBGET
integrated database retrieval system
