Sander lucioperca (pikeperch): 116049130
Help
Entry
116049130 CDS
T07345
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116049130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sluc04812
]
116049130
Cytoskeleton proteins [BR:
sluc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116049130
Intermediate filaments
Intermediate filament-binding proteins
116049130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
PMC2NT
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
116049130
NCBI-ProteinID:
XP_031154382
Ensembl:
ENSSLUG00000012615
LinkDB
All DBs
Position
4:complement(40594971..40658253)
Genome browser
AA seq
2350 aa
AA seq
DB search
MMTTVAADLEHLELQQQYSSNDTVNNRWDEDWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLSRVSCRISDLYLDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHHNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAL
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLLGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERV
QAVVSVARELEAEHYHDIKRVTARKDNVIRLWEYLLELLKARRLRLEMNLGLQRVFQEML
YIMDWMDEMKMMLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKAVSTNATKYSVNS
DGYKPCDPQVIQDRVSHLEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKE
QILSSFEHGKDLTGAMRLLSQQRALEDEMSGRAGHLKHTIAEGQAMVQAGHFAAIKIQER
IADLQAQWAALEQLAVARKRRLEEALALHQFQADADDVDAWTLDALRIVSTGETGHDEFS
TQALVRKHKDAAAEVASYRPVIDSLHEQAATLPEEEARSEEVRGRLAGIEERYREVSELT
KLRKQALQDALALYKMFSEANACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEM
NNQASRVAVVNQIARQLMHNGHPSEKDIKTQQDKLNNRWSQFRDLVDQKKESLNSALGVQ
NYHLDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRGE
AQRLAEEHPDQANAITGRLAEITAVWEEMKNTLKTREESLGEARKLQQFLRELDDFQSWL
SRTQTAIASEDMPNTPAEAEKLVAQHHGIRNEIQNYEEDYQRMRDMGEMVTQGQTDAQHM
FLRQRLQALDTGWNELHKMWENRQNLLTQSTAYQLFLRDTKQAEAFLNNQEYVLAHTEMP
PTLEGAEAAIKKQEDFMTTMDANEDKINGVVEVGRRLASDGNINAERIQERVASIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMTYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIQKDGMLLVSEKPETEAVVKEKLSALHAMWEELESTTQTKAQCLFD
ANKAELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQMLEKQVEVRQREVVE
LQSQVKALGQEVKDTDEVDGRRQLVETKFQQLLEPLQRRKDFLVESREVHQFNRDVEDEI
LWVQERMAVAKSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDILERSQSLVKDESPN
GDVIRRRLADLRELWGQLMEEAERRHGRLQEAHKAQQYYFDAAEAEAWMSEQELYMMSEE
KAKDELSAVTMQKKHQIVEQAVEDYAETVHQLSKTSRGLVADGHPESERISMRQSQVDKL
YAGLKDLSEERQGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDSVNRLADELINSGHGDAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASFELHKFYHDAKEILGRIMDKQKKLPEEVGRDQNTVETLQRMHNTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRESDVLEAWRSLLEACDGRRVRLLDTGDKFRFFSM
VRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKALLA
RKHYASQEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPY
LSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERMRK
PPSPEPVILQNEESQQQSGVIIQNGLPSDQDSPRDGVDGGDLVNGVGERSSKEPSPGASP
TSGRKSKTSLSSTLPSKNQDSSPSQLEGLLHRKHEWEGHNKKASNRSWHNVYCVINNQEM
GFYKDGKAAAAGVPYHGEVPIGLKDATCDVASEYKKKKHVFKLRVTDGNEYLFQAKDEDE
MSTWIQAILNASVDGCDVPPGSIPGTPASGRAQTLPAAVTLTTESSPGKREKDKEKDKEK
RFSLFSKKKQ
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacggtggccgccgacctggagcacctggagctgcagcagcagtacagcagc
aacgacacggtcaacaaccgctgggacgaggactgggacaacgagaacagctccgcccgc
ctcttcgaacgctcccgcatcaaggcgctcgcagatgagcgagaggcggtccagaagaag
accttcactaagtgggtcaactctcacctgtcccgggtgtcgtgcaggatctctgacctg
tacctggacctgagggatggacgcatgctcatcaagctgctggaggtcctctccggggag
agactgccgaagccgaccaaaggaaggatgcggatccactgcctggagaacgtggacaag
gctctgcagttcctgaaggagcagcgggttcacctggagaacatggggtcacatgacatc
gtggacgggaaccaccgcctgacgctcggcctcatctggaccatcatcctccgcttccag
atccaggatatcagtgtagaaactgaagacaacaaagagaaacggtcggctaaagacgct
ctgctgctctggtgtcagatgaagacggccgggtatcccaatgtgaacatccacaacttc
agcaccagctggagagacggcatggccttcaacgctctcatccacaaacacaggccggat
ctgatcgactttgacaaactgaagaagtccaacgctcatcacaacctgcagaacgccttc
aacctggcggagcagcacctgggcctcaccaagctgctggaccctgaggacatcagcgtg
gaccatcctgatgagaagtcggtcatcacctacgtggtgacgtactaccactacttctcc
aagatgaaggctctgaaggtggaggggaaacgcatcggaaaggtgttggacaacgccctg
gagacggagaagatgatcgagaagtacgagtctctggcctcggacctgctggagtggatc
gaacagaccatcatcatcctcaacaacaggaagttcgccaactctctgctcggcgtccag
cagcagctgcaggccttcaacacctaccggacggtggagaaaccgccaaagttcacagag
aagggaaacctggaggtccttctgttcaccatccagagtaagatgagagccaacaaccag
aaggtctacatgccccgagaggggaaactcatctcagatatcaacaaggcctgggagcga
ctggagaaagcggagcacgagagggagctggctctgaggacggagctgattcgtcaggag
aaactggaacaactcgccagacgcttcgaccgcaaggcagccatgagagagacctggctc
agcgaaaaccagagactagtgtcacaggacaactttgggtttgatcttcaggccgtggag
gcggccaccaagaagcacgaggcgattgagacggacatcgcggcgtacgaggagcgcgtg
caggcggtggtttccgtggcgagggagctggaggcggagcactaccacgacatcaaacgc
gtcacggccaggaaggataacgtgatccggctgtgggagtacctgctggagctgctgaag
gcgcggcggctgaggctggagatgaacctgggcctgcagagagtcttccaggagatgctc
tacatcatggactggatggacgagatgaagatgatgctgctgtctcaggattacgggaag
catctgttgggcgtggaggacctgctgcagaaacacgctctggtggaggccgacatcgcc
atccaggccgacagggtgaaggccgtcagcaccaacgccaccaagtactccgtcaacagc
gacggctacaagccctgcgaccctcaggtgatccaggaccgcgtctcccacctggagttc
tgctaccaggagctgacccagctggccgccgagcgccgtgcccgcctggaggagtcccga
cgcctctggaagttcttctgggagatggcggaggaggagggctggatccgtgagaaggag
cagatcctgtcttcctttgagcacggcaaggacctgacgggggcgatgcgcctgctcagc
cagcagcgcgccctggaggacgagatgagtggccgcgccggacatctcaaacacaccatc
gcagagggccaggccatggtgcaggccggacacttcgccgccatcaagatccaggagcgg
attgctgacctgcaggctcagtgggcggcgctggagcaactggccgtggcgaggaagcgg
cgcctggaggaggcgttggcgctgcaccagttccaggcggatgcggacgacgtggacgcc
tggacgctggatgccctgcgcatcgtctccaccggagagacgggccacgacgagttctcc
acgcaggcgctggtccggaagcacaaggacgcggcggcggaggtggccagctaccggccg
gtcattgactcgctccacgagcaggcggccacgctgcccgaagaggaggcgcggtcggag
gaggtgcgcggccgcctggccggcatcgaggagcgctacagggaggtgtcggagctgacc
aagctgaggaagcaggcgctgcaggacgctctggcgctctacaagatgttcagcgaggcc
aacgcctgcgaggtctggatcgatgagaaggagcagtggctcaacagcatggagatcccc
gaaaaactggaggacctggaggtcatacagcaccggtttgagagtctggagccggagatg
aacaaccaggcgtctcgtgttgccgtggtgaaccagatcgccaggcagctgatgcacaac
ggtcacccgagcgaaaaggacatcaagacccagcaggacaaactcaacaacaggtggagc
cagttccgggacctggtggaccagaagaaggagtccctgaactcggctctcggcgtgcag
aactaccacctggactgcaacgagaccaagtcgtggatcagagagaagaccaaagtcatt
gagtccacgcaggagctgggcaacgacctgaccggcgtcatggcgctgcagaggaagctg
acgggcatggagcgcgacctggccgccatcgaggacaagctgggcgacctgcgtggcgag
gcccagcgcctggcggaggagcaccccgaccaggccaacgccatcacaggccgcctggcg
gagatcacggccgtctgggaggaaatgaagaacactctgaagacccgcgaggagtcgctg
ggcgaggcccgaaagctgcagcagttcttgcgcgagctggacgacttccagtcgtggctg
tcgcgcacgcagacagccatcgcctcggaggacatgcccaacacgccggccgaggcagag
aagctggtggcccagcaccacggcatccggaacgagatccagaactacgaggaggactac
caaaggatgcgggacatgggcgagatggtgacgcagggccagacggacgcccagcacatg
ttcctgcgccagaggctgcaggcgctcgacaccggctggaacgagctgcacaagatgtgg
gagaaccggcagaacctgctgacccagtccaccgcctaccagctgttcctcagggacacc
aaacaggctgaggccttcctcaacaaccaggagtacgtcctggctcacacggagatgccc
cccaccctggagggggccgaggccgccatcaagaagcaggaggacttcatgaccaccatg
gacgccaacgaggacaagatcaacggcgtggtggaggtcggcagacggctggccagcgac
ggaaacatcaacgccgagcgaatacaggagagagtcgcctccatcgacgacagacataag
aagaacagggaggctgccgtagagctgctgatgagactgaaggacaacagagacctgcag
aagttcctgcaggactgccaggagctgtctctgtggatcaacgagaagatgctcacggct
caggacatgacgtacgacgaggccaggaacctgcacagcaagtggctgaagcaccaggcc
ttcatggccgagctgcagtccaacaaagagtggctggacaagatccagaaggacggcatg
ctgctggtgtcggagaagccggagacggaggcggtggtgaaggagaagctgtcggcgctc
cacgccatgtgggaggagctggagtccaccacgcagaccaaagctcagtgtctgttcgac
gccaacaaggccgagctgttcacccagagctgcgcagacctggacaagtggctgggaggc
ctcgagggtcagatccagtccgacgactacgggaaagacctgacctccgtcaacatcctg
ctcaaaaaacaacagatgctggagaagcaggtggaggtgcgtcagcgtgaggtggtggag
ctgcagagccaggtgaaggctctgggtcaggaggtcaaagacacggacgaggtggacggg
cggaggcagctggtggagacaaagttccagcagctgttggagccgctgcagcgccgcaag
gacttcctggtggagtcgagggaagtccaccagttcaaccgagacgtggaggacgagatc
ctgtgggtccaggagaggatggctgtggccaagtctaccgaccacggacacaacctgcag
accgtccagctgctcatcaagaagaaccagactctgcagaaagagatccagggtcatcag
cctcgcatcgacgacatcctggagcgcagtcagagcctcgtgaaggacgagtcgcccaac
ggcgacgtgatccggcggcgcctggccgacttgcgggagctgtggggccagctgatggag
gaggcagagcgccgccacggccgcctgcaggaggcacacaaagcgcagcagtactacttt
gacgccgccgaggccgaggcctggatgagcgagcaggaactgtacatgatgtcagaggag
aaggccaaggacgagctgagcgccgtgaccatgcagaagaagcatcagatcgtagagcag
gcggtggaggactacgccgagacggtccaccagctgtccaagaccagcagaggactggtg
gctgacggacacccagagagtgagcgaatcagcatgcggcagtctcaggtggataagctg
tacgccggcctgaaggacctatcagaggagaggcagggcaaactggacgagaggctccgc
ctcttccagctgaacagggaggtggatgacctcgagcagtggatcgctgagcgggaggtc
gtggccgggtcgcacgagctggggcaggactacgaacatgtaactatgttacaggagcgt
ttccgtgagttcgcccgggacaccgggaatatcggtcaggagcgcgtggacagcgtcaac
cgtctggcagatgagctgatcaactctggtcatggcgacgcagcaacggtggctgaatgg
aaggacggtctgaacgaagcctgggccgacctgctggaactgatcgacacccggacgcag
attcttgctgcctccttcgagctccacaagttctaccacgatgccaaggagatcctggga
cgcatcatggacaaacaaaagaaactgcctgaggaagttggccgcgaccagaacacggtg
gagactctgcagaggatgcacaacacctttgaacacgacatccaggccctgggaacacag
gtgaggcagctgcaggaggacgctgtgcgcctgcagtcggcatacgccggagataaagcg
gacgacatccagcggagggagagtgatgtgctggaggcctggaggagtctgctggaggcg
tgtgacggacgcagggtccgcctcctcgacaccggagacaagttcaggttcttcagcatg
gtccgagacctgatgctgtggatggaagatgtgatccggctcatcgaggcccaggagaat
cccagagacgtgtcgtcagtggagctgctgatgaacaaccaccagggcatcaaggccgag
atcgatgctcgaaacgacagcttcaccgcctgcatcgagctggggaaagccctgctggcc
cggaaacactacgcttcacaggagattaaagagaagctgctgcagctgacagacaagagg
aaagagatgatcgacaagtgggaggaccggtgggagtggctgcgactcatcctggaggtg
caccagttctcccgggacgccggcgtggccgaggcctggctgctgggtcaggagccgtac
ctgtccagccgggagatgggccagagcgtggacgaggtggagaaactcatcaaacgccac
gaggcctttgagaagtccgctgccacctgggaggagcgcttctccgctctggagaggctg
accacgctggagctgctggaggtgagaaggcagcaggaggaagaggagaggatgaggaag
cctccgtctccggagccggttattcttcagaacgaagagtctcaacagcagagcggagtc
atcattcagaacggactcccgtcagaccaggactctcctcgggacggcgtggacggagga
gatctggtgaacggtgtcggcgagcggagctccaaggagccgagccccggcgcatccccg
acctccggcaggaagagtaagaccagcctgtcatccacgttgccttccaagaaccaggac
agctcgccgtcgcagctggagggactcctgcaccgcaaacacgagtgggagggacacaac
aagaaggcgtccaataggtcgtggcacaacgtgtactgtgtcatcaacaaccaggagatg
ggtttctataaagacggcaaggcggctgcggcgggcgtcccgtaccacggcgaggttccc
atcggcctgaaggacgccacgtgtgacgtggcctcagagtacaagaagaagaaacacgtc
ttcaaactccgagtcactgatggaaacgagtatctgttccaagccaaagatgaagacgag
atgagcacctggatccaggccatcctgaacgccagcgttgacggctgcgacgtgccgccg
ggcagcatccccggcacgccggcgtctgggcgcgctcagacgctgccggccgccgtcacg
ctcaccacagagtcgagtcccggcaagagagagaaggacaaagagaaggacaaggagaaa
cgcttcagtctgttcagcaagaagaaacagtag
DBGET
integrated database retrieval system
