Sander lucioperca (pikeperch): 116049143
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Entry
116049143 CDS
T07345
Name
(RefSeq) calpain-1 catalytic subunit-like
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04141
Protein processing in endoplasmic reticulum
sluc04210
Apoptosis
sluc04217
Necroptosis
sluc04218
Cellular senescence
sluc04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116049143
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116049143
04217 Necroptosis
116049143
04218 Cellular senescence
116049143
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116049143
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sluc01002
]
116049143
Enzymes [BR:
sluc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
116049143
Peptidases and inhibitors [BR:
sluc01002
]
Cysteine peptidases
Family C2: calpain family
116049143
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
116049143
NCBI-ProteinID:
XP_031154422
Ensembl:
ENSSLUG00000021447
LinkDB
All DBs
Position
4:40413016..40436690
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AA seq
702 aa
AA seq
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MFGGVSGRIQKDRQRAEGLGSVQQAVRYLNQDFQALKDECLQTGSLFQDPAFPAEPATLG
FKELAPFTAKTRGVEWKRPTELTENPEFIVGGATRTDICQGALGDCWLLAAIGSLTLNER
LLHRVVPHGQNFGHGYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELLFVHSAEGREFWSA
LLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELKKAPRDLHRIISKALERGSLLG
CSIDITSALDMEAVTFKKLVKGHAYSVTALREVEYRGRRERLIRIRNPWGQVEWTGAWSD
DSSEWSSVDSAEKDELLCKMEDGEFWMSFQEFLRQFSRLEICNLTPDALSKDSVSFWTTT
MFQGSWRRGSTAGGCRNHANTFWINPQYKVSLLEEDDDPEDSEAACSFLVALMQKDRRRF
RRSGQDTHTIGFAVYQIPEELRGCPSVHMKKDFFLRNASCARSETFINLREVSARLRLPP
GDYLIVPSTFEPAKEADFVLRVFTEKQADTHEVDDDVEANFEQEEEISDSDIDDSFRSMF
AQLSGDDMEISVRELRTILNRVVSKHRDLQTDGFSMESCRGMVGLMDKDGSARLGLLEFQ
ILWNKILKWLGIFREFDLDKSGCMSSYEMRLALENGGFRLNNKLYQTLVARYADNDIIDF
DNFTCCLVKLEAMFKAFQELDRDGTGSVELNIVEWLYVTMCG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcggcgtgtccgggcggatccagaaggaccggcagcgggctgagggtctgggt
tcggtgcagcaggccgtacgctacctgaaccaggacttccaggccctgaaggacgagtgt
ctgcagaccggatccctgttccaggacccggcattccccgcagaacccgccactctgggc
ttcaaggaactcgctccgttcaccgccaaaaccagaggcgtggagtggaagagacccacg
gagctgacagagaaccctgaattcatcgtgggcggagccacgaggacggacatctgtcag
ggagcgctgggagactgctggctgctcgctgccatcggttctctgactctgaatgaacgt
ctgctgcatcgcgtcgttcctcacggtcagaacttcggccacggatatgccggcatcttc
cacttccagttctggcagtttggggagtgggtggacgtggtgattgacgaccgtctgccg
gttaaagatggagagctgctgttcgtccactcggccgaggggagggagttctggagcgct
ctgctggagaaagcctacgccaagctgaacggctcgtatgaggcgctgtccggtggcagc
accacggagggattcgaagactttaccggcggtgtgtcggagatgtacgagctgaagaaa
gctccccgagatcttcatcgtatcatcagcaaagctctggagagaggatcgctgctgggc
tgctccatcgacatcacaagcgctctggacatggaggcggtgacctttaagaagctggtg
aaaggccacgcctactctgtgaccgcactccgagaggtggagtaccgcggccgtcgggag
cgtctaatccggatcaggaacccgtggggtcaggtggagtggaccggagcctggagtgac
gactcgtctgagtggagctccgtggactctgcagagaaagacgagctgctctgtaagatg
gaggacggagagttctggatgtccttccaggagtttctgcgtcagttttcccgtctggag
atctgtaatctaacccccgatgctctgagtaaggactcggtcagtttctggaccaccacc
atgttccagggcagctggaggaggggcagcacggccgggggctgccgcaaccacgccaac
accttctggatcaacccccagtataaggtgtccctattggaggaggacgacgaccccgag
gacagcgaggccgcctgcagcttcctggtggcgctgatgcagaaagaccgccgccgcttc
cgccgcagcggccaggacacgcacaccatcggcttcgccgtctaccagattcctgaggag
ctccggggctgtcccagcgtccacatgaagaaggacttcttcctgcgtaatgcgtcctgt
gctcgctctgagaccttcatcaacctgagggaggtgagcgccaggctccgcctccctcct
ggagattacctcatcgtcccgtcaaccttcgaaccggccaaggaggccgacttcgtcctc
agggtcttcaccgagaaacaggcggacacacatgaggtggacgatgacgtggaggcaaac
tttgaacaagaggaggaaatctctgacagcgacatcgacgattccttcagatccatgttc
gctcagctgtctggagacgatatggagatctcagtgcgggagctgcggaccatcctaaac
cgagttgtgtccaaacaccgagacctgcagacggatggttttagcatggagtcctgcaga
ggcatggtcggactcatggacaaagacggcagcgctcggctcggtctgctggagtttcag
attctctggaacaagatcctgaagtggctgggcatcttccgagagtttgatctggataaa
tctggatgtatgagttcctacgagatgcgtctggcgctggagaacggcgggttcagactg
aacaacaagctgtatcagactctggttgctcgctacgccgacaacgacatcatcgacttc
gacaacttcacctgctgcctcgtaaaactggaggccatgttcaaggcgttccaggagctg
gacagagacgggacaggaagtgtcgagctgaacatcgtcgagtggctctatgtgaccatg
tgtggctga
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