Sander lucioperca (pikeperch): 116049148
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Entry
116049148 CDS
T07345
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03013
Nucleocytoplasmic transport
sluc03015
mRNA surveillance pathway
sluc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116049148 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
116049148 (eif4a3)
03015 mRNA surveillance pathway
116049148 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116049148 (eif4a3)
03041 Spliceosome [BR:
sluc03041
]
116049148 (eif4a3)
03009 Ribosome biogenesis [BR:
sluc03009
]
116049148 (eif4a3)
03012 Translation factors [BR:
sluc03012
]
116049148 (eif4a3)
Enzymes [BR:
sluc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116049148 (eif4a3)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116049148 (eif4a3)
mRNA cycle factors
Stress granule specific factors
116049148 (eif4a3)
Spliceosome [BR:
sluc03041
]
Complex C
Other components
EJC/TREX
116049148 (eif4a3)
Ribosome biogenesis [BR:
sluc03009
]
Eukaryotic type
90S particles
Helicases
116049148 (eif4a3)
Translation factors [BR:
sluc03012
]
Eukaryotic type
Initiation factors
eIF-4
116049148 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
TniB
Motif
Other DBs
NCBI-GeneID:
116049148
NCBI-ProteinID:
XP_031154427
Ensembl:
ENSSLUG00000003820
UniProt:
A0A8D0CQL7
LinkDB
All DBs
Position
4:complement(28659473..28679753)
Genome browser
AA seq
406 aa
AA seq
DB search
MAAAVVQGRKRLLREEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccgtggttcagggcaggaagagactcctgcgggaagaagacatgactaag
gtggagttcgagaccagcgaggaggtggatgtgacccccaccttcgacaccatgggcctg
cgggaggacctgctccgcggcatctacgcttacggttttgagaagccgtcagcgatccag
cagagagccatcaaacagatcatcaaaggcagagacgtcatcgcccagtcccagtctgga
acgggaaagacggccactttctgcgtgtcggtgctgcagtgcctcgacatccaggtgcgg
gagacccaggctctgatcctggcccccaccagagagctggcggggcagatccagaaggtt
ctgctggctctgggggactacatgaacgtacagtgccacgcctgcatcggaggcaccaac
gtgggcgaagacatccgcaagctggactacggccaacacgtggtgtctggcacgcccggc
cgcgtgtttgatatgattcgccgccggagtctgaggaccagagccatcaagatgctggtc
ctggacgaggccgacgagatgctcaacaaaggttttaaggagcagatctacgatgtgtac
cggtaccttcctccggccacccaggtggttctgatcagcgccacgctgccacacgagatc
ctggagatgaccaacaagttcatgacagaccccatccgcatcctggtcaaacgtgatgag
ctgactctggaggggatcaagcagttctttgttgccgtggagagagaggagtggaagttt
gatactctgtgtgatctctacgatactctgaccatcacacaggctgtcatcttctgcaac
accaagagaaaggtggactggctgaccgagaagatgcgagaggccaacttcacggtgtct
tcgatgcacggagacatgccgcagaaagagagggagtccatcatgaaggagttcagatct
ggagccagccgcgtgttgatctctacagatgtttgggcgcgaggtttagacgttcctcaa
gtttctctgatcatcaactacgacctgcccaacaacagagagctctacatccacaggatt
ggccggtcggggcggtacggccgtaagggcgtggccatcaactttgtgaagaacgacgac
atccggatcctgagagacatcgagcagtactactccacgcagatcgatgagatgcccatg
aacgtggccgatctgatctga
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integrated database retrieval system
