Sander lucioperca (pikeperch): 116049150
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Entry
116049150 CDS
T07345
Name
(RefSeq) serum response factor-like isoform X1
KO
K04378
serum response factor
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116049150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116049150
Transcription factors [BR:
sluc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
116049150
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
116049150
NCBI-ProteinID:
XP_031154429
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Position
4:complement(28683547..28694618)
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AA seq
399 aa
AA seq
DB search
MGTRTGAGLNTAGPGPNNDPDVISSGSSPDSDSGEDTAGSGGDRRGVKRERSEREVGTSR
GPSPGGLPGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKVIACAVSLQAYEL
STLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRCDASADQR
MSATGFQETELTYQVVEAESEGAKDSGIKPAVSVSGQDSGIKPAVSVCGLQTPPSSSVAL
QLPGSAPCWTPSSTNGTLLKTAAGLVLPAGFTLMSGGGVSQSIQLQPSTNQSSSDTRSPA
SSTASVSSSSSSSSGHMMYPGGHTVMYAAPASSLADGSLTVLNTQSHDPAALQQVFLTSL
PPGGAQIPVQLHQMVISQQSSNLTELQVISLDTHTPRED
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccagaaccggagccgggctgaacacggccggaccgggaccgaacaatgacccg
gatgtgatttccagcgggtcctccccggactctgactccggggaggacacggcgggctct
ggcggggacaggagaggcgtgaagcgggagcggagtgagcgcgaggtcggtacctcccgg
ggtccgagccccggcgggctgccgggagccaagcccgggaagaaaaccagaggaagggta
aagatcaagatggagttcatcgacaacaaactgcggcgctacacgacgttcagcaagagg
aagaccggcatcatgaagaaggtaatagcctgtgccgtgtccctgcaggcctacgagctg
tccacgctgactgggacccaggtgctgctgctggtcgccagcgagacgggtcacgtgtac
acgtttgcgaccaggaagctgcagccgatgatcacgtcagagacggggaaggctctgatc
cagacctgcctcaactcgccagactccccgccgcgctgcgacgcctccgccgaccagcgg
atgagcgccacgggcttccaggagacggagctcacctaccaggtggtggaggccgagtca
gagggggccaaggactcggggatcaaaccagcggtctctgtgtccggccaggactcgggg
atcaaaccagcggtctccgtgtgcggcctgcagacccccccctcttcctcggtggccttg
cagctgccgggcagcgccccctgctggacgccctcctccaccaacgggacgctgctgaag
acggcggccggcctcgtgcttcctgcaggcttcactctgatgtcaggaggtggagtctcc
cagagcattcagcttcagccctcgaccaatcagagcagctcagacacgcgcagccccgcc
tcctccacagccagtgtctcttcctcttcgtcgtcatcgtcgggtcacatgatgtacccc
ggaggtcacacggtgatgtacgctgctcctgcgtcctcattggccgacggcagcctcacg
gtcctcaacacccagtcacatgaccccgcagctctccagcaggtcttcctcacctcgctg
cctcctggaggggctcagatcccagtccagctgcaccagatggtgatcagtcagcagagc
agcaacctgacagagctgcaggtcatcagtctggacacacacacacctagagaggactga
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