Sander lucioperca (pikeperch): 116049258
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Entry
116049258 CDS
T07345
Symbol
limd1a
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
116049258 (limd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116049258 (limd1a)
03036 Chromosome and associated proteins [BR:
sluc03036
]
116049258 (limd1a)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
116049258 (limd1a)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
116049258 (limd1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
116049258
NCBI-ProteinID:
XP_031154607
Ensembl:
ENSSLUG00000005930
LinkDB
All DBs
Position
10:30451161..30475318
Genome browser
AA seq
614 aa
AA seq
DB search
MMDKYEDLGLEASKFIEDLNMYEASRDGLFRTRRDAGNNPDFEETRKVFASKMTKIHMQK
QQEEIAKNNQAMKMNGGHNSTYYTKDRPPINSYRQPCEAAAKPPILSGPVPGTTTGNQYA
QFDGQKHHTVIQSELPVGRAYGYGNNYDNKERSEPHTPPNPGNASHSAPTHARYPVSQSA
AWAPSRESQLSSALSGSGGNSTSQQQPQRQSAPPTANSLPPQQNQAVTPSVNLSPPSSAG
PARGWAGEPSGSAKPDLIHALPLSAFTAGAEFHMQHPSTHSAAHYAPSSPNSRPSTNHNG
PAAASSLLPAPFETPLPKAQVASAALIPGNVLRSSSHGQGQSQIPICGHAVSAEADVLSS
PKPVYLPCESLHAQPPEQGPSAAEIKLEALTNRLEREMDAQPKADYFGVCVKCNKAVYGA
SKACQAMGSLYHDSCFTCSACSRRLRGKAFYYVGGRVFCEEDFLYSGFQQSADKCNACGH
LIMDMILQALGKSYHPGCFRCVICNESLDGVPFTVDTENKIYCLKDYHRVLAPKCAACNQ
PILPSEGSDETIRVVSMDKDYHVECYHCEDCKMELNDEEGHRCYPLNGHLLCHSCHLKHM
EPDCSSPITAAASY
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgatggataaatacgaagatttaggactcgaggcgagtaagtttatcgaggacctaaac
atgtatgaagcatccagagatggtttatttcgaacgagaagagatgcaggaaataacccc
gactttgaagagacacgaaaagtttttgcttctaaaatgactaaaatacacatgcagaaa
cagcaagaggagattgcaaaaaacaaccaggccatgaagatgaatggtggccacaacagc
acatattacaccaaagacagaccgcccatcaatagttacaggcagccgtgtgaagcggca
gcgaagcccccgatactctctggccctgtgccgggcaccacgactgggaatcagtacgca
cagtttgacggccagaaacaccacacagttattcagtctgaacttccagtcggcagggca
tatggctacggaaacaattacgataacaaggagcgctcagagccacatactccccccaac
ccaggaaacgcgtctcatagcgcgcccacacatgctcgttacccggtcagccagtcggct
gcctgggccccatccagagagagccagctttcctcagctttgtctgggtctgggggcaac
agtacatctcagcagcagccccagcgccagtctgcacctcccaccgccaacagtcttcca
ccccagcagaatcaggctgtcaccccgtctgtaaacctgagtccaccctcatctgctggg
ccagccaggggctgggctggagagccctctggctcagccaaacctgacctcatccacgcc
ctgcctctgagtgccttcacagcaggagctgagttccacatgcagcatccctccacacac
tctgcagcccattatgcaccatcttctcctaattcgagaccctctaccaaccataatggt
cctgcagcagcgtcctcgctcttacctgcaccttttgaaacacctctacccaaagcccag
gtggcatcagctgccttgatccctggcaatgtcttgagaagcagcagccatggtcaaggt
cagagccaaatacccatctgtggacatgccgtcagtgctgaagctgatgtcctgtcctcc
ccgaagcctgtctatctaccctgcgagtctctccatgcgcagccccctgaacaggggcct
tcagcagctgaaataaagttagaagccctcaccaatcggctggaaagagagatggatgcc
caaccaaaggctgattactttggagtctgtgttaagtgcaacaaggcagtgtatggagcc
agcaaggcctgccaagctatgggtagcctctaccatgacagctgcttcacctgcagcgcc
tgcagtcgaaggctgagagggaaggcgttctactatgtcggagggagggttttctgtgaa
gaagactttctgtactctggattccagcagtctgcagacaagtgcaacgcatgtggacat
ctgatcatggacatgatcctgcaggccctcgggaagtcgtaccaccccggctgtttccgc
tgtgtcatctgtaatgagagccttgacggagtgcccttcactgtggacactgaaaataag
atatactgtctcaaagattaccacagggtcctggcgcctaaatgtgcagcctgtaaccag
cccatcctgccctcagaggggtctgatgaaaccattcgagttgtatccatggacaaagac
taccatgtggaatgctaccactgtgaggactgtaagatggagctgaacgacgaagagggt
caccgctgctaccctctgaacggccaccttctctgccactcgtgccacctgaagcacatg
gagcctgactgctcttctcccattactgcagctgcctcctactaa
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