Sander lucioperca (pikeperch): 116049379
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Entry
116049379 CDS
T07345
Symbol
rxrbb
Name
(RefSeq) retinoic acid receptor RXR-beta-B isoform X1
KO
K08524
retinoid X receptor alpha
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03320
PPAR signaling pathway
sluc04148
Efferocytosis
sluc04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116049379 (rxrbb)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
116049379 (rxrbb)
03320 PPAR signaling pathway
116049379 (rxrbb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116049379 (rxrbb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sluc03310
]
116049379 (rxrbb)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
116049379 (rxrbb)
Nuclear receptors [BR:
sluc03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
116049379 (rxrbb)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
116049379
NCBI-ProteinID:
XP_031154831
Ensembl:
ENSSLUG00000000716
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All DBs
Position
10:complement(28653064..28665072)
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AA seq
444 aa
AA seq
DB search
MSSQQPNSSASNSPTSILGSPFSVISPSLNSPVVSPSLGFGPISNSQISSSAPISGMHSI
SSSEDIKPPFGLRPMPAHSPGIMLSQKRMCVICGDRSSGKHYGVYSCEGCKGFFKRTVRK
DLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREVIKHVKWIKEDGKDEGWMTVQE
ERQRNREREGELEFSVGVNEEMPVEKILEAETAVEQKTELHSDGGSAGNSPHDAVTNICQ
TADKQLFALVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIGLKDGVLLASEL
QRDNAHSAGVGAIFDRESVQSAEVGAIFDRVLTELVNKMRDMQMDKAELGCLRAIVLFNP
DAKGLSNTGEVELLREKVYASLEAYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF
FKLIGDTPIDTFLMEMLEAPHQLS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcacagcagcccaacagttcagcctccaacagccccaccagcatcttgggttct
cctttctcagttatcagcccctcacttaactccccagtggtctcaccctctctggggttt
ggacccatcagcaacagtcagatctcttcttcagcacctatatcagggatgcactcaatc
agcagctcagaagatatcaagcctccgtttggcctgaggcccatgccagctcacagccct
ggaataatgttgtctcagaaacgcatgtgtgtcatctgtggggaccgctcttctggcaag
cactatggagtgtacagctgtgagggttgcaaaggtttcttcaaacgaactgtgcgcaaa
gaccttagctatacctgcagggataacaaagagtgcctggtcgacaaacgccagcgcaat
cgctgccagtactgccgctaccagaagtgcctggccatgggcatgaagagggaagtgatc
aaacatgtaaagtggataaaagaagatggaaaagatgagggatggatgacggtccaggag
gagcgccagaggaaccgagagcgtgaaggagagcttgagttcagtgtcggcgtgaatgag
gagatgcctgtggagaagattttagaggcagagacggctgtggagcagaagactgaactt
cactctgatggcggttctgcaggcaactctccccatgatgcagttaccaacatctgtcag
actgcagacaaacagctgtttgccttggtggagtgggcaaagagaatccctcacttctct
gaactgcccctcgatgaccaggtcatcctcctgcgtgcaggctggaatgagctcctcatt
gcttcgttctcccatcgctccattggtttgaaggatggagttctcctggcctctgagctg
cagcgtgacaatgcacacagcgcaggagttggagccatttttgacagggagagtgtgcag
agcgcagaggtcggtgccatatttgacagggtccttacggagctcgtcaataaaatgaga
gatatgcaaatggacaaagcagagctgggctgcctccgagccatcgtcctcttcaaccca
gatgctaaagggctttccaacaccggtgaggtggagctccttagagaaaaggtctatgca
tcattggaagcgtactgcaaacagaaatacccagagcagcagggaaggtttgctaagctc
cttcttcgactgccagcactgcgatctattggcttgaagtgcttggagcatctcttcttc
ttcaagcttatcggtgacacacctattgacactttcctcatggaaatgcttgaagctccc
catcagttgtcttag
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