Sander lucioperca (pikeperch): 116049408
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Entry
116049408 CDS
T07345
Symbol
gsdmeb
Name
(RefSeq) gasdermin Eb
KO
K22146
gasdermin-E
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
116049408 (gsdmeb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sluc02000
]
116049408 (gsdmeb)
Transporters [BR:
sluc02000
]
Other transporters
Pores ion channels [TC:
1
]
116049408 (gsdmeb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Motif
Other DBs
NCBI-GeneID:
116049408
NCBI-ProteinID:
XP_031154889
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All DBs
Position
10:complement(28006322..28015484)
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AA seq
460 aa
AA seq
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MFATATRNFVEEVDNGGLLIPLSSLNDTIALLTVVVKRKRFWVWQKPKYIPSDFNLNDIL
TGDIPIKPGVIETDFIKYNGTFGDNIQGTVDANFVHTNVSLEGKDSSKLQSSFGSLKKEE
VDVQKLLRDSKGRVLDMSHSLIQQTKEKPRQVFGFVKERIVTTQPCSVIEEVQQGGQCGG
GLSLCGPKSSKVSLKENGSLSKDSNITMEIPIHTTIAYALLELEIKQDGRFELCLMSDTT
GGFEVDGLAKKGLLGEKSYLIQELEQLSDHFQLLSALPATTRSFLLQKITKVMEDRGAVS
SLKNALDQMCLDKRLALGDVTTTEPQKQNIRAILDLLEQSGQVESTPVLTALNLVTSAMD
EMTNDCLAVLGMCCSLTVLQALEQLVQCVSGKGELHLSSAGLAALTEDVFEKTEHLFASS
NVSLKRDGDTVKTEISHLAGNRPLVLCIAVRGLASLAHSD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccacagccaccagaaactttgtggaggaggtggataatgggggtttgctgatc
ccattatccagcttgaatgatactattgctcttctgacagtggtggtgaagcgcaagcgt
ttctgggtctggcagaagcccaagtatattccctctgattttaacctcaatgatatacta
acaggagacatacctataaagccaggtgtcatagagacagacttcattaaatacaatggg
acatttggtgacaacatccaagggaccgtggacgcaaattttgtccacaccaatgtgagc
ctcgagggtaaagactcttccaaactccagtcatcctttggcagtttgaagaaagaggaa
gtggatgtgcagaagctgctgcgagactccaaaggcagggtcctggacatgtcccatagt
ctgatccagcagacgaaggagaagcccagacaggtgtttgggtttgtgaaggagcgtatt
gtgactactcagccctgttcggtcatagaggaggtgcagcagggaggacagtgtggagga
ggactgagcctctgcgggcccaagagctcaaaggtttcattgaaagagaacgggagcttg
agtaaagacagtaacatcaccatggagattcccatccatactaccattgcctatgctctt
ttagagctagagatcaaacaagatgggcgctttgagctgtgtctgatgtcagacaccact
ggaggttttgaagtcgatggccttgctaagaaaggactgttgggtgaaaaaagctacctt
atacaagagctggagcaactgagtgaccatttccagctgctttcagctcttccagccacc
acgaggtcctttctgctccagaaaatcaccaaagttatggaggaccgaggggccgtcagt
tcacttaagaatgcgctggaccagatgtgccttgataagagacttgccctgggtgatgtc
acaacaacagagccccaaaaacagaacatccgagcaattctggaccttttggagcagtct
ggtcaggttgagtccacaccagtccttacagcccttaaccttgttaccagcgcaatggat
gagatgacaaatgattgtcttgctgtcttgggaatgtgctgcagcctcacagtgttacag
gctctggagcaactggtgcagtgtgtatccgggaaaggggagttgcatctgagcagcgca
ggcctagctgcactgacagaagacgtctttgaaaagactgaacatctatttgcctcctct
aatgtgtccctgaagagagacggggacacagtgaaaacagaaataagccacctggcagga
aatcgccctctggtcctgtgtattgctgtcagaggtctcgcctcgttagcccacagtgat
tga
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