Sander lucioperca (pikeperch): 116049417
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Entry
116049417 CDS
T07345
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116049417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116049417
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116049417
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116049417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
PQQ_2
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
116049417
NCBI-ProteinID:
XP_031154906
Ensembl:
ENSSLUG00000006208
LinkDB
All DBs
Position
10:27916198..27917719
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AA seq
408 aa
AA seq
DB search
MARNPGSQSRGSLSPEGILREIQINLLECKVCFEKFSTQQREHRPQNLSCGHVLCLECIR
ALSHPLLRKLECPFCRQLCSVDSTSHCQALSDLQELLLSWSPTSSAPLHRQKASLSLAPG
RTSTALHLCTAFGGWGTLINPTGIAVLGSSGTIVVVHDGEKRVAVFNQQGRKLHSFGQRG
QASWEVCYPVDVAVTRCGHVVVTDAGDKAVKVFTSRGHHVLTVRDSLQMPWGVDTDSCGH
ILVSDVQAGTLSQVKMDYAHGRALEHQTAISDLQHPKAVACCRVTWNTAVMEHLPDDIHS
PGRHQHTRLRVFTEDFHPLYQTDSFSLTLQSTVRLNMSGVAFDRDGDVIVIDSNQGTVWS
LGKLQNGPALTPLVGDHLIRPVGLVSLNNTLIILDSGDHTVKMYSAKH
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaatcctggttcccagagtcgtggcagcctgagtcctgaggggattctgaga
gagatccagatcaacttgctggagtgtaaagtctgtttcgagaagttcagcactcagcag
agggagcacagaccacagaatctttcctgtggccatgtactctgtctggaatgcatcagg
gctctgtcccaccctctcctgagaaagttggagtgcccattctgtcgacagctgtgcagt
gttgacagcacctcccactgccaggctcttagtgacctgcaggagctgctattgtcctgg
agtcccacatcctctgctcctcttcacaggcaaaaggcaagccttagcctggccccaggt
cggacatccacagctctgcacctctgcacagcttttggcgggtgggggactcttatcaat
cccactgggatagctgttttgggatcttcagggacaatagttgtggtgcatgatggagaa
aagagggtggcagtgttcaatcaacagggcaggaagctgcacagttttgggcaaagagga
caagccagttgggaggtctgttacccagtggatgtggcagtgactcgctgtggtcatgtt
gtggtgactgatgcaggagataaagctgtgaaggttttcacctccaggggacaccacgtg
ttgacagtcagagattccctccagatgccctggggtgtggatacagacagctgtgggcac
atcctggtctcagacgtccaggctggcacgctgtcccaagtaaaaatggactacgctcac
ggtcgcgctctggagcatcaaacagccatttcagacctgcagcatccaaaagcagtggcc
tgctgtcgggtgacttggaacactgcagtgatggagcatttacctgatgacatacattca
ccagggagacaccaacacacaaggctgagagtgtttacagaagacttccaccccctttat
cagactgacagtttcagcctgaccctgcagtccacagtgaggctgaacatgtcaggcgtg
gcctttgacagagatggagatgtgattgtgattgactccaatcaggggacggtttggagt
ttggggaagctccagaatggcccagccctgaccccacttgtgggagaccacctcatccgc
ccagttggactggtgtcactgaacaacacgcttatcattctggacagtggagaccataca
gtgaagatgtattcagctaaacattga
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integrated database retrieval system
