Sander lucioperca (pikeperch): 116049422
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Entry
116049422 CDS
T07345
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116049422 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116049422 (trip13)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
116049422 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
AAA_16
nSTAND3
AAA_18
AAA_14
Viral_helicase1
AAA_24
AAA_25
KAP_NTPase
NPHP3_N
TIP49
AAA_5
AAA_28
AAA_17
RNA_helicase
TsaE
Cytidylate_kin
AAA_7
RuvB_N
NACHT
AAA_33
ATPase_2
AAA_30
AAA_11
ABC_tran
bpMoxR
DUF815
IstB_IS21
SLFN-g3_helicase
ATPase
Zot
AAA_19
DUF6393
Rad17
Mg_chelatase
PhoH
PduV-EutP
Sigma54_activat
nSTAND1
NRBF2
AAA_3
NTPase_1
Motif
Other DBs
NCBI-GeneID:
116049422
NCBI-ProteinID:
XP_031154918
Ensembl:
ENSSLUG00000006350
LinkDB
All DBs
Position
10:27819849..27826225
Genome browser
AA seq
428 aa
AA seq
DB search
MVFTGMDGDRMEVGNQKQNIHVEVHVKSHSTAKLSEVRIHILALLNRHSMVFGNYRWTEF
DEDFLQKHVESVAIVDLEELVTQPLDLKSCSVSVHIFTLNEDGPSTLSLEEDEELSAANH
WLLPAAEFNGIWESLVYDSGVKTQLLDYVTTTIYFSDKNVNSNLISWNRVVLLHGPPGTG
KTSLCKALAQKLSIRLSSRYSYGQFVEINSHSLFSKWFSESGKLVTKMFQKIQQLIDDKD
ALVFVLIDEVESLTAARSACQAGTEPSDAIRVVNSVLTQLDQIKRHSNVVILTTSNVTEK
IDLAFVDRADIKQYIGPPSVKGIYNIYLSCLEELMKCQIIYPRQQLFTMFELETMGFAKS
EVSEHSLNLRNIALKSKGLSGRALRKLPFLSHALFVKTPTVTLERFLEAMDQAVDKQTEE
KANLVNGV
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggtttttacagggatggacggtgacagaatggaggtgggaaaccagaaacaaaacatc
catgtggaggtccatgttaaatctcacagtacagctaaactgtctgaagtgaggatacat
attctggctctgctgaatcgccacagcatggtttttggaaactacagatggacagagttt
gatgaagacttcttgcagaaacatgtggaatccgtggctatagttgatcttgaggaactg
gtaacccagccccttgatttaaagagctgctctgtctccgttcacatcttcactctgaat
gaggatggacccagcacgctcagtttggaggaggatgaggagctttcagcagccaatcac
tggttgctgccagcagctgaattcaatgggatttgggagagtctggtatatgacagtgga
gtcaaaacccagctcctggattacgtcacaacaacaatttacttctcagacaaaaatgtc
aacagcaacctgatttcgtggaaccgtgttgtgctgcttcacggacccccaggcacaggg
aaaacgtcactgtgcaaagctcttgctcagaagctgtcaatcaggctgtcaagtcggtat
tcttatgggcaatttgttgagataaacagccacagcttgttctcaaagtggttctcagag
agcggtaagctggtcacgaagatgtttcagaagatccaacaactgattgacgacaaagat
gctcttgtgtttgtcctgattgatgaggtggagagtctgacggcagctaggagtgcctgc
caggcgggaacagagccctctgacgccatccgagtggtcaactccgttctcactcaactg
gaccagatcaaacgacattccaacgtcgtgatcctgacgacctccaatgtgacagaaaag
atagacttggcgttcgtggacagagctgacatcaagcagtacattggacctccatctgtg
aagggcatctacaacatctacctctcctgcctggaggagctgatgaagtgccagatcatc
taccctcggcagcagctgtttaccatgtttgagctcgagacgatgggctttgcaaagagt
gaggtgtccgaacacagtctgaacctgaggaacattgctctaaaaagcaaaggtttgagt
ggaagagcactcaggaagttaccgtttctatcccatgcactgtttgtaaagacaccgaca
gtgactcttgagaggtttttggaggctatggaccaagcagtggataaacagacagaggaa
aaagctaacctggtcaacggtgtctga
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