Sander lucioperca (pikeperch): 116049489
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Entry
116049489 CDS
T07345
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116049489 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116049489 (rad54b)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
116049489 (rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
116049489
NCBI-ProteinID:
XP_031155038
Ensembl:
ENSSLUG00000001027
LinkDB
All DBs
Position
10:26783473..26798831
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AA seq
938 aa
AA seq
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MRRSGAPSQLLGNAVKKPRFMPPGASTSCLVPESKPLSPKLGLGNALEKVQKSLAALAPS
KTEYDVQPKAAQPAPALSRALARVLSAAESKENEAEREYANTGSDEYTEDNRPAGVNGSG
SSQTPQPCVGSVYVSGAAGSDSGCSQDGVRYFSVMWCKASKKKHKRWEGDAVLVTRGRTA
TLKDMESKDIGKGSGYKVSELASLSEGESLMVGGKEVEVMGVISAEDFARGRCFQEVQVE
KEEPRTKSAPPPCRRLTSKPFCSPTLLGRADHSASKPEEEQTCRPRHDPLAPGALVMPRP
SANHQWSNNKLGLPVVDVVVDPYLTAQLRPHQRDGLLFLYECVMGLRAMGRYGAILADEM
GLGKTLQSVALSWTLLKQGPYGGKPVAKRVLVVTPGSLVHNWGAEFNKWLGRERISVFTL
DQDHRIEQFVSSPLHSVLVISYEMLLRCLEQVQKVEFGLIICDEGHRLKNSSIKTSSAIS
SLSCNRRVILTGTPVQNDLQEFYAIIDFVNPGILGSSTAYRKVYEEPILHSRQPSCTEEE
RVLGEERAAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCNPSPLQRELYKHLLCHRVF
RACLQGSTQTHTHLACITALKKLCNHPGLLHGTAKEKADCGSVENSLYEGLVELFPESYS
SGGFNTADSGKLLVLSDLLTSIRQLSPSDRVVIVSNYTQTLDLLQDLCVHVGYTFCRLDG
QTPTSQRQRLVDAFNSPYSQDFLFLLSSKAGGVGLNLVGASHLVLYDIDWNPANDIQAMA
RVWRDGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKRAEHTSFSTSELRDL
FSLTDTLSLTHDLLNCSCSMDGSVQAVVEEDEQVSERPCQLGRQGDRGGAQQKHLSMSEL
MQWRHFSGDTHTFSDPYLDHSRNHITFAFQTTMSHTAL
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgctcaggagctcccagccagctattgggtaatgctgtgaaaaagccccggttt
atgccacctggagcatctacttcatgtcttgtgcctgaatccaagcccctttcccctaaa
cttggtttaggcaatgcactggaaaaggtccagaaaagtctagcagcactagctccgagt
aaaacagagtatgatgtccagcccaaagctgcccagcctgctccagccttgtcaagggct
ctggctcgtgttcttagtgcagcggaaagtaaggaaaatgaggctgaaagagaatatgct
aacactggctcggatgagtacacagaagacaacagaccagcaggagtaaatgggtccggg
tcttctcaaacccctcagccttgtgtggggtcagtctatgtttctggagctgcaggctca
gactctggctgcagtcaggatggagtgcgttacttcagtgtgatgtggtgtaaggccagt
aagaagaaacacaagcgctgggagggcgatgcggtcctagttacaagaggacgcacagcc
acactgaaagatatggagagcaaggacattggaaagggaagtggctacaaggtgtccgag
ctggcctccctgtccgagggagagagcctgatggtcggagggaaggaggtggaggtgatg
ggggtcatttctgctgaggacttcgccaggggacgttgtttccaagaggtccaggtagag
aaagaggagccacgcacaaagtcagctccacctccctgtcgtcgcttgacatccaaacct
ttctgctccccaacactgttgggcagagcagatcattcagcatccaaaccagaggaggaa
caaacctgcagacctcgtcatgacccactggctccaggtgcactggtgatgcctcgtcct
tctgctaaccaccagtggtctaataacaagttgggacttcctgtggttgatgttgttgtt
gacccgtacctgactgctcagctgcgaccgcaccagagagacggtctgctctttctctat
gagtgtgtcatgggcttgagagctatgggacgctatggggctatcctggctgacgagatg
ggtctggggaagaccctgcagagcgtggcactgtcctggacgttgcttaaacaaggtcct
tacggtgggaaaccagttgctaagcgtgtccttgtggtcactccaggcagcctggtgcac
aactggggtgcagagtttaacaagtggctgggccgtgagaggatcagcgttttcactttg
gatcaggaccacaggatagagcagtttgtgtcatcccctctgcacagtgttcttgtgatc
agctatgaaatgctgctgcgctgcctggagcaggtacagaaagtggagtttggtcttata
atttgcgatgagggccacaggttaaagaacagcagcatcaaaacatcctcagccatcagc
agcctgagttgtaatcgcagagtcatactaacaggcaccccagtacagaacgacctgcag
gagttctatgctattatagactttgttaacccggggattctcggatcatccactgcatat
aggaaagtatatgaggagccgattctacactccagacagccctcctgcacagaggaggag
agagttttgggagaggagcgggcagcagagctctctcgcctgactggcatgttcatcctg
agacggacacaggagatcatcaaccgctacctgcctccgcgtctcgactggacgttgttc
tgcaacccatcccctctccagcgagagctttataagcatctcctctgccacagagtcttc
agagcctgccttcagggctccacacaaactcacacacacctagcctgcatcactgcactg
aagaagctctgtaaccaccccggtctgctccatggcactgccaaggaaaaagcagactgt
ggttcagtggagaactctttatatgagggcctggttgagctcttcccagaatcctactct
tcaggtggattcaacaccgctgactctggaaaacttctggttctgtcggacttgctaacc
tctatcagacaactcagcccttcagacagggtggtcatagtgtccaactatactcagacg
cttgacttgctccaggacttgtgtgtacacgtgggctacaccttctgccgacttgacgga
caaacccccaccagccagagacagcgtctggttgacgcttttaacagtccctactcccag
gacttcttgtttctgctaagctccaaagcaggtggtgtggggcttaatctggtgggtgct
tcccacctggtgctgtatgatattgactggaaccctgccaatgacattcaggccatggct
cgagtgtggagagatggacagaagaagacagtgcacatctatcgtcttctcactgcaggc
actattgaggagcgtatatttcagagacaggtgtccaaacaggggctttctgggacagtg
gttgacctgggcaaaagggcggagcacaccagcttctccaccagtgaactgcgagatctt
tttagcctgacagacactctctctctaacacacgacctgctgaactgcagctgcagcatg
gacggctcagtccaggctgtcgtagaggaagacgagcaggtttctgaaaggccatgccag
ctaggtcgtcaaggtgaccgtggaggggcgcagcagaagcatctcagcatgtccgagctg
atgcagtggagacatttctctggtgacacacacaccttctcagatccttacctcgatcac
tcacgaaaccacatcaccttcgcctttcagaccaccatgtctcacacagctctgtaa
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