Sander lucioperca (pikeperch): 116049509
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Entry
116049509 CDS
T07345
Symbol
tra2b
Name
(RefSeq) transformer-2 protein homolog beta isoform X1
KO
K12897
transformer-2 protein
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116049509 (tra2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sluc01009
]
116049509 (tra2b)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116049509 (tra2b)
Protein phosphatases and associated proteins [BR:
sluc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116049509 (tra2b)
Spliceosome [BR:
sluc03041
]
Common components
Common spliceosomal components
SR proteins
116049509 (tra2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
116049509
NCBI-ProteinID:
XP_031155094
Ensembl:
ENSSLUG00000023261
LinkDB
All DBs
Position
8:23679811..23686574
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AA seq
299 aa
AA seq
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MSDNDKGYGERESRSASRSVSPRGSRKSASCSPARSPARSKEGSRHSRSKSRSRSRSKSG
SHSHRGSRRHYSRSRSRSRSYRRRSHSRSYSGERRRRSHSRSPMSNRRRHIGNRANPDPN
GCVGVFGLSLYTTERDLREVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTGDAKEAKE
RANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYSGGGGGGSSSGGGGSGPSGPRRNS
RDYDRGYDRGYDRGYDRGGYERYDDRDHYRSYRRRSPSPYYRGAYRSRSRSRSYSPRRY
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataatgacaaaggttacggcgagcgggagtctcgctctgcatccaggagtgtg
agtcctcggggctctaggaagtctgcaagctgctccccagctcggtcgcctgcccgttca
aaagaaggctcccgccactcccgctccaaatcccggtcccggtccaggtcaaaatctggg
tcccactctcaccgtggctcacggagacactatagccgatctcgatcccgctcaaggtcc
taccgccgccgatctcacagtaggtcctacagtggagagcgccggcgcaggagtcatagc
cgctcaccgatgtccaaccgccgcaggcacatcggcaaccgagctaatccagacccaaac
ggttgcgtgggagtgtttggcctgagcttgtacaccacagagagggatctgagggaagtc
ttctctaaatacggccccctggcggatgtctctattgtgtatgaccagcagtcgaggcgt
tccaggggctttgcttttgtgtactttgagaacaccggtgatgccaaggaggcaaaggaa
cgagcaaatggcatggagctggatggccgtaggatcagggtagacttctccatcacaaaa
agacctcacaccccaacccctggaatctacatgggccgacccacatatagtggtggtggt
ggtggtggtagtagtagtggaggtggtggaagtggtccaagtggtcctcgccgcaactca
cgagactatgaccgtggatacgaccgcggatacgaccgaggatacgacagaggcggctat
gaacgctatgacgaccgggatcactacaggtcatacagaagacgatctccgtccccatac
tacagaggggcttataggtctcggtccagatcgcggtcttattctccccgtcgctattga
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