Sander lucioperca (pikeperch): 116049585
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Entry
116049585 CDS
T07345
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116049585 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116049585 (prpf3)
Spliceosome [BR:
sluc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116049585 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
DUF4011
Motif
Other DBs
NCBI-GeneID:
116049585
NCBI-ProteinID:
XP_031155239
Ensembl:
ENSSLUG00000005921
UniProt:
A0A8C9XQB3
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All DBs
Position
10:complement(25564399..25571191)
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AA seq
699 aa
AA seq
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MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTIDQLRPFLDDSAG
GFVERLFEALEESRSARGNKGGGEKHRKRDLKDVFGDEPETGAVREIQESGDGTAPKRKR
VPRFEEVEEPEVIPGPPSESPGMLTKMQIKQMMEAATKQIEERKKQLSFSSSVPAAPLET
PPVSRLLGTSAAAGGGSSIAPSQAASFMNDAIEKARKAAELQARIQSQLAMKPGILGALG
NTGPHNLVALANLHAMGIAPPKVEIKEVNKPTPLILDDKGRTVDASGKEVELTHRMPTLK
ANIRAVKREQFRQQLKEKPGEDLESTSYFDQRVTITPAQRPRRGFKFHDQGRFEKIAQRI
RTKAQLERLQNEIAQAAKKTGIQASTKLALIAPRKEIGEGEVPNIEWWDSYILPYNIDIT
PDTKFEELELFGVTNLVEHPAQISPPVDADKPVTLGVYLTKKEQKKLRRQTRREGQKEVQ
EKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLT
AEQRKEKKVKKLKEDLSNGVHIAVYRIRNLQNPAKKFKVEANANQLYLTGTVVLHRDVNL
VVVEGGPKSQKKFKRMMLHRIKWEEHNSKRDDPDGDDDTKRNNKCWLIWEGTAKERSFGE
MKFKQCPTENMAREHFKKHGTEHYWDLALSQSVLDGTDD
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcctaagcgggaggtggaggaactaaggccatgggtggagcggactgtgaag
aaggtgctgggtttctcagagcccacagtggttactgctgctttgcactgtgttggaaag
ggactggacaaaaggaagaccatagaccagctgcgtcccttccttgatgactccgcagga
ggttttgtggagcgtctttttgaagctttggaggaaagccgcagtgcacgtggcaacaaa
ggaggaggagaaaagcaccgcaagagagacctcaaggatgtgtttggtgatgagcctgaa
acgggtgcagtgcgagaaattcaggagtcaggagatgggacagcaccgaagaggaaacgg
gtccctcgcttcgaggaggtggaggagcctgaggtcatacctggacctccatctgagagc
cctggcatgctgaccaaaatgcagataaaacagatgatggaagcagccacgaaacagatc
gaggagaggaagaaacagctgagcttttcctcttcagtccctgctgcaccactggaaacc
cctccagtctcacggcttcttggcacatctgcagcggcaggtggtggctcatctatcgcc
ccctcccaggctgccagcttcatgaatgatgctatcgagaaggcccgcaaagctgctgag
ctgcaggcccgcatccagtcccagttagccatgaaacctggtatcctcggagccttgggg
aacactgggcctcacaacctagtggcactagctaatctacacgctatgggaattgcccca
ccaaaagtagaaatcaaggaggtgaacaagccaacacctcttattctggatgacaaggga
agaactgtggatgccagtggcaaagaggttgaactcacacaccgcatgccaacactgaaa
gcaaacattcgagcagtaaagagggagcagtttcgtcagcagctgaaggagaagcctgga
gaggacttggagtccacgtcctacttcgaccaacgtgtgacgattacaccggctcagcgc
cctcgcagaggctttaagttccatgaccaggggcgcttcgagaagattgctcagagaatt
agaactaaggcccagttggaaaggttgcagaatgagattgcccaggcagcgaagaagacc
ggaatccaggcatccaccaaactggcactgattgcccctaggaaagagattggagaaggg
gaggtgcccaacattgagtggtgggactcctacatcctgccctacaacatagacataaca
cccgacacaaaatttgaagagttggagctctttggtgtgaccaacctggtagaacatcct
gcccaaattagccctccagttgacgcagataagccggtaacgctgggcgtatacctgaca
aagaaagaacagaagaagctgagaagacagacacgaagggaggggcaaaaagaagttcaa
gagaaggttcgcctgggactgatgcctccaccagaacccaaagtacgcatctctaacctg
atgagagtgctggggacggaagcggttcaagaccccacgaaggtggaggcccacgtcaga
gcgcagatggccaagagacagaaggctcatgaggaggcaaatgcagcacgcaagctcaca
gcggagcagaggaaagagaagaaggtcaagaagttaaaagaagacctcagtaatggtgtt
cacattgcagtgtacaggatccgtaacctgcaaaatcctgctaagaagtttaaagtggag
gccaatgccaaccagctgtacctgaccggcacggtagttctgcacagagatgtcaacctt
gttgtggtggagggaggccccaagtcccagaaaaagttcaagaggatgatgttgcacaga
atcaaatgggaggaacacaacagtaaaagagatgatccagatggtgatgatgatacaaag
aggaacaacaagtgctggctgatttgggaaggcacagctaaagagcgtagttttggggag
atgaagttcaagcagtgccccacagagaacatggccagagaacacttcaagaaacacggc
acagaacactactgggatctagctctcagccagagtgtgttggacggcacagatgactga
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