Sander lucioperca (pikeperch): 116049623
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Entry
116049623 CDS
T07345
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
116049623 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116049623 (xrcc5)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
116049623 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
DUF6005
VWA
Motif
Other DBs
NCBI-GeneID:
116049623
NCBI-ProteinID:
XP_035860194
Ensembl:
ENSSLUG00000023452
LinkDB
All DBs
Position
8:complement(23881134..23892286)
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AA seq
721 aa
AA seq
DB search
MAGAKSALVLCMDVGFSMSNSAPGEEPPFELAKKVIQKFVQRQVFAETKDELALVLFGTD
STKNSLDKDDQYQNITVHRHLMVPDFELLEEIENQIHPESQQADWLDALVVCMDLLQTET
KEKKCDRLNIVLLTDLNTEANSEQLDVIIENLKKAGITLQFFLPFPVGDDEEGGGDADGR
DPSQPGTGKGLSKEQKSGLDMVKHIMLSLDEEDGLGEIYSFSKAIEQLCMFKRIEKRPMA
WPCQLTIGSCLPIRIVGYKAVTEEKLKKTWTTVDAQTNQKDDVKRETVYCLDDDNETEVQ
KDDTIQGFRYGSDIVPFSKVDQDQMKYKHDGKCFAVLGFSKQNMVQRHQFMGTQVIKIFS
AKDDEHAGVALSALIRALDELNMVAIVRYAYDRRSNPQVGAAFPCIKQDYECLMYVQLPF
MEDLRQFTFPSLANNKKFTPSDTQLSAVDSLIDSMMLVEGDDQKDMFKVHHIPNPAFQRH
FQCLHHRAVSPGTPLPPMEPWLKTALERPDVISERCHVPLEEIKRKFPLTEVEKKKKLKT
SAQIFGKDSEEPDAKKEKGDEEEEYSLADIAEGSVTSVGSVDPARDFRTLIRKKSLPFGE
VCQQLTRRIEQLLSNKNTHYYMKSITCIQAFREQSVKLGDANLYNGYLQSLKRSIPNRGL
EVFWNLLVQDAITLISKDEVEGSTVSKNEANQFLVSEEKKEEASTPQAEDTGDVDDLLDM
M
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgccaaatcagcattggtgttgtgcatggatgttgggttctccatgtccaac
tctgccccgggcgaagagcctccctttgaacttgccaaaaaagtcatccagaagtttgtc
cagcgccaggtttttgcagagaccaaggatgaactggcgttagttctgtttggcacagac
tccaccaagaactcactggacaaggatgaccagtaccagaacatcactgtgcatcgtcac
cttatggtgcctgattttgagcttctggaggaaatagaaaatcagatccatccagagagt
cagcaggctgattggctggatgctctcgttgtgtgtatggatcttcttcagactgaaaca
aaggaaaagaagtgtgatcgtctcaacattgtcctcttgactgacctgaacactgaggcc
aactcagagcagctggacgttattattgaaaacctgaaaaaagctggcatcaccctgcag
ttttttttacctttccctgtgggggatgatgaagagggtggaggagatgcggacggaaga
gaccctagtcagccgggcacgggcaaaggtctatccaaggaacagaaaagtggcctggac
atggtgaaacacatcatgctaagcctggatgaggaggacggcctgggagaaatttactcc
ttcagtaaagcaattgagcagctgtgcatgttcaagcgcatcgagaaaagaccaatggcc
tggccctgtcagctgaccatcggcagctgtctgcccatccgtattgttggatacaaagca
gtgacagaagagaaactgaagaaaacgtggactacagttgacgctcaaaccaaccagaaa
gatgacgtgaagagagagactgtctactgtctggatgatgacaatgagacagaggtgcag
aaggatgatactatccaaggttttcgttatggaagtgatattgttcccttctccaaagta
gatcaagaccagatgaaatacaaacatgatgggaaatgctttgctgtcctcggcttttcc
aaacagaacatggtacaacggcatcagttcatggggactcaagtcatcaagatattttct
gccaaggatgatgagcatgcaggagttgcgctgtccgctctcatccgagcgctagatgaa
ctcaacatggtggccattgtacgttacgcctatgaccggcgcagcaaccctcaagtagga
gcagccttcccgtgcatcaagcaggactatgagtgtctgatgtacgtccagctgcccttc
atggaagacctcagacagttcacatttccttctcttgcaaacaacaaaaagttcactcca
tcagacacgcagctctctgctgttgactctcttattgactccatgatgttggtagagggg
gatgatcaaaaggacatgttcaaggtccaccacattcccaaccctgccttccagaggcac
ttccagtgtctgcatcatcgggcagtaagccccggcacccctcttccccccatggagcca
tggctgaagactgctcttgagcgccctgatgtcattagtgaacgttgccatgttccacta
gaggagataaagaggaagtttcctctgacagaagtggagaagaaaaagaagctcaagact
agtgctcagatttttggcaaagactctgaggagccagatgccaagaaggaaaagggagac
gaagaagaggagtatagcctggctgacattgccgaaggctctgtgacttcggtgggaagc
gtggatccagccagagacttccgtactctgataaggaagaagagtcttccatttggagag
gtttgtcagcaactgactcgcaggatagagcagttgcttagcaacaagaacacacactac
tacatgaaaagcatcacttgtatccaggcttttagagagcagtccgttaagctgggggat
gccaatctgtacaatggctacctccagtccctgaaaagaagcattccaaacagagggctg
gaggtcttctggaacctgcttgttcaagatgccatcactctgatcagtaaggacgaggtc
gaaggaagcactgtatccaaaaacgaagctaatcagtttctggtttctgaggagaagaaa
gaggaggcatctacaccacaagctgaagatactggagatgttgatgacttgctggacatg
atgtaa
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