Sander lucioperca (pikeperch): 116049750
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Entry
116049750 CDS
T07345
Symbol
vars1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116049750 (vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sluc01007
]
116049750 (vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sluc03016
]
116049750 (vars1)
Enzymes [BR:
sluc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
116049750 (vars1)
Amino acid related enzymes [BR:
sluc01007
]
Aminoacyl-tRNA synthetase
Class I (U)
116049750 (vars1)
Transfer RNA biogenesis [BR:
sluc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116049750 (vars1)
Prokaryotic type
116049750 (vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
GST_C_2
Arc1p_N_like
tRNA-synt_1e
GST_C_3
Jag_N
DUF1263
Motif
Other DBs
NCBI-GeneID:
116049750
NCBI-ProteinID:
XP_031155569
Ensembl:
ENSSLUG00000024188
LinkDB
All DBs
Position
10:complement(23669238..23682137)
Genome browser
AA seq
1272 aa
AA seq
DB search
MATLYVSPHPDDFRSLLALIAAEFCPSSCLQTLTEDPPASLNARSRPTLLLGAGEGDSVL
SGASAVAWYLANQGNRAGIDTKQQSQVWQWLSFADNELTPVSCAVVFPLMGVMGVDKKLQ
QSSRAELIRVLKVLDQALEPRTFLVGESVTLADMAVATAVLLPFKYVLEPSDRKVLTNVT
RWFTTCTNQPQFLKVLGKITLCEKMVPVTPKTNAAANASPAVDSADATANGPPKTEAQLK
KEAKKREKLEKFQQKKDMEAKKKTQPLTEKKAKPEKKELGVITYSVPTAPGEKKDVISPL
PDSYSPQYVEAAWYSWWEKQGFFKPEYGRKSISDQNPRGVFMMCIPPPNVTGSLHLGHAL
TNAIQDSLTRWHRMLGETTLWNPGCDHAGIATQVVVEKKLKRERGLSRHDLGRENFIQEV
WKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFIRMHDEGVIYRSKRLVN
WSCTLNSAISDIEVDKKELSGRTLLPVPGYKEKVEFGVLVSFAYKVDGSDEEVIVATTRI
ETMLGDSGVAVHPADPRYQHLKGKMVLHPFCDRKMPIVSDEFVDMSFGTGAVKITPAHDH
NDYEVGERHNLAFINILDENGLLINVPPPFLGMKRFEARKAVLQALMDKGHFKEIKDNPM
VVPVCSRSKDIVEPLLKPQWYVNCTDMGKQAADAVREGRLKIIPDHHLKTWFNWMDNIRD
WCISRQLWWGHRIPAYFITVNDPSVKPGEDMDGHYWMSGRSEEEAREKAAKRFNVSADKI
TLRQDDDVLDTWFSSGIFPFSIFGWPNETQDLNVFYPGTLLETGHDILFFWVARMVMMGL
KLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLHALLMDSNLDPVE
VEKAKQGQASDYPNGIPECGTDALRFALCAYTGQGRDINLDVNRILGYRHFCNKLWNAVK
FAMKTLGDNFVPSEKAQLCGEESVSDRWILSRLSAAVGLCDAGFKAYDFPTITTAIYNFW
LYELCDVYLESVKPVFNKAEEDSASQRQALVCRQTLYSCLDVGLRLLSPIMPFVSEELYQ
RLPRRRPQSDPPSISVTPYPNTEEFCWHSEEVDRDMEFVMTVIKTIRSLRADYNLTKTRA
DCYLQCIDSATVSLVQKYSLQIQTLSYSQAVIPVTGNQPVPGGCAVAIASDRCTVNLMLK
GLIDVEKEVTKLMTKKGDLEKQMEKMREKMAKSDYKEKVPVKVQEQDADKLRQSQTELEK
VKEAMDNFRKMM
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggccactctctacgtgtcccctcaccctgatgacttcaggagccttctggctctcata
gctgcagagttttgtccgtcctcctgcctgcagaccctcacagaggaccctcctgcatcc
ctgaatgcccgctccagaccgaccctgctgctgggcgctggggaaggtgactccgtcctg
agcggggccagtgctgtggcctggtacctggctaatcaggggaacagggctggtatagat
acaaagcagcagagccaggtgtggcagtggctcagctttgcagacaatgaactcaccccg
gtgtcctgtgctgtcgtcttcccactgatgggggtgatgggagtggataagaagctccag
cagagttcccgtgcagagttgatacgcgttctgaaggttctcgatcaggcactggaacca
agaaccttcttggtgggggagagcgtcaccctggctgatatggctgtagctactgctgtt
cttctccctttcaaatatgtgttggagccatcagacaggaaagtcttgaccaatgttacg
agatggttcacaacttgcacaaatcagcctcagttcctgaaggtgttggggaagatcact
ctttgtgaaaagatggtgccagttacaccgaaaacaaatgctgctgctaatgccagtcct
gccgttgattctgccgatgccacagctaatggtccaccaaagacagaagcccagctgaag
aaggaagctaagaagagagaaaagctggaaaagtttcagcagaagaaggacatggaggcg
aagaaaaagactcagccactgacagagaaaaaggccaaaccggaaaagaaggagttggga
gttatcacatacagtgttcccactgctcctggggaaaaaaaagatgtcattagcccgctt
cctgactcctacagtcctcagtatgtggaggctgcctggtattcatggtgggagaaacag
ggattcttcaagcctgagtatgggaggaagagtattagtgaccagaaccctcgtggcgtc
ttcatgatgtgtatccctccacctaatgtgactggatcacttcaccttggtcacgccctc
accaatgccattcaggattctctgaccagatggcacaggatgctaggggagaccaccttg
tggaatccgggctgtgatcacgctggcatcgccacccaggtggtggtggaaaaaaagctg
aagagagagagaggtctgagccgccacgatctgggcagggaaaacttcatccaggaagtt
tggaaatggaagaatgagaagggagaccgtatctaccaccagctgaagaagctgggctcc
tctctggactgggacagagcctgctttactatggaccctaaactttcctatgcagtccaa
gaggcttttatccgcatgcatgatgagggagtgatctacaggagcaagcggctggtcaac
tggtcctgcacactaaactctgccatctctgacatagaggtggataagaaggagctcagt
ggcaggactctgttgcctgtgcctgggtacaaagagaaagtggagtttggagtgttggtg
tctttcgcctacaaggtggacggatcagacgaggaagtgatcgtggcaacaactcgtatt
gagactatgttgggagactctggtgtagctgtccaccctgctgaccccagatatcagcat
ttgaagggaaaaatggtgctgcaccccttctgtgaccgcaagatgccaattgtctcagat
gaatttgtggatatgagttttggaacaggtgctgtcaaaattaccccagcccatgaccat
aatgactacgaggttggagagagacacaacctggccttcatcaacatcttggacgagaat
ggcctgctcattaacgtgcctcctcccttcctgggcatgaagcgttttgaggccaggaag
gccgtgctgcaggctctgatggacaaaggccactttaaagagatcaaagacaaccctatg
gttgtcccagtctgcagtcgttccaaagacattgtggagccgctgctgaagccgcagtgg
tatgtgaactgcacagatatgggcaagcaggctgcagacgctgtcagagagggacggctc
aaaatcattcctgatcaccacctcaagacgtggttcaactggatggacaacatcagggac
tggtgtatctctcgacagctgtggtggggtcaccgtattcctgcttacttcatcactgtc
aacgatccctctgttaaaccaggagaggacatggacggtcattactggatgagtgggaga
tcggaggaggaggccagagagaaggctgcaaaacgcttcaatgtgtctgctgacaaaatt
accctcagacaagatgacgatgttctggacacttggttctcgtctggcattttccccttc
tccatctttgggtggcctaatgagacccaggacctgaatgtgttctaccctggcaccttg
ctggagacgggccatgacatcctgttcttctgggttgctcgaatggttatgatgggcctc
aaactgacaggcaagctgcccttcaaagaggtttatctgcatgcagtggtgagggacgcc
catggaaggaagatgagcaaatctttgggcaacgtcattgaccctctggatgttattaca
gggatctccctcgagggtcttcatgcccttttgatggacagcaacttggatccagtggag
gtggaaaaggcaaagcagggccaggcatcagactacccaaatggcatcccagagtgcggc
acagatgctctccggttcgccctgtgtgcctacactggccaaggtagggatatcaacctg
gatgtcaaccgcatcctgggttaccgtcacttctgcaacaaactgtggaatgctgtgaag
tttgccatgaagacgctgggagacaactttgtaccatcagagaaagcccagttgtgtgga
gaggagagtgtatcagacaggtggattctgtctcgactgagtgctgctgttggtctctgt
gatgctggcttcaaggcctatgacttcccaaccatcacgaccgccatctacaacttctgg
ctgtacgagctctgtgatgtctacctggaaagtgtgaaaccagtgttcaataaagcagag
gaagacagcgccagccagagacaggccctggtgtgcagacaaaccctttacagctgttta
gatgtcggtctgcgccttctttctcctattatgcccttcgtcagtgaggagctctaccag
aggttaccacgacgacgacctcagagtgatccccccagcattagtgtcacaccctaccct
aatacagaggagttctgctggcacagtgaggaggtcgaccgtgacatggagttcgtaatg
actgtgatcaagacgatcaggtcgctgagggccgactacaacctgaccaagaccagagct
gactgctacctccagtgcatagactctgcgaccgtgtccctggtgcagaagtacagtctg
cagattcagaccttgtcttattctcaggccgtcattcctgtgacaggcaaccagcctgtc
ccaggaggctgtgctgtggctatcgcctctgacagatgtactgtcaaccttatgctcaag
ggtctcattgatgtggagaaggaagtgactaagctgatgacaaagaaaggtgacttggag
aaacagatggagaagatgagagagaaaatggcaaagagtgactacaaggagaaggtgcca
gtgaaggtgcaagagcaggatgctgataagctacggcagagtcaaactgaacttgaaaaa
gtaaaagaagccatggacaacttcaggaaaatgatgtga
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integrated database retrieval system
