Sander lucioperca (pikeperch): 116049763
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Entry
116049763 CDS
T07345
Symbol
cicb
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116049763 (cicb)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116049763 (cicb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Cic_C
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
116049763
NCBI-ProteinID:
XP_031155589
LinkDB
All DBs
Position
10:2672530..2709525
Genome browser
AA seq
2721 aa
AA seq
DB search
MRPLKKNRGRSPPLTRGRGGRRRGGSQPLLEKEPKRVKRETLVKTTQYTPNTPTHKQTLP
TFANSNEDPITNSNTPTMEESTELRKPVESVEKEGKKAEEKTEKEKIVGTNGNSAVATES
VAFPTSSPVPLSTATPPLATNHSPNLGSVSSRKTATFKARVPKKKYTYEHFANNANALTT
IPTSRPAHIHNNYCNINSKISDSVNTPNNNFKSSNNINNSINVSINSSTNNNTTKGINNM
TNSSAGSHNTFINSSNSRSNNCSGNQSSVLTVDSRATEAKCFVSTEDKALRTADSQAGEN
ESEGAPYSVRSSSTDTASEHSADLDMMEAAGQSLHQKNSNYPAPLHNLHHKEASLSEGLA
EVLAKGMKNQRVLARQIKRTMESGVRATGNRGVKEINSCPLLSVFRPGVVRRVSGGIVEV
QLQGEETLVKYPFHGGTMMTSSSGAESTVEFILDAPPPGMAPVAVRTRVCVPFGGEEGGP
LLYREGIITQVDPHPGVSFPYQVLLNEDRETLDNGGVGEEKEKRKANARTVWVSRQSLRL
LTPPWEVPHLDGGRAKEREREREREERERREEMEVEREVCQLSIGMGVLGGGARLGHSFS
HEGVVGGHPYVNAHPPPHSSTVTSSVGGSTVHGCGDNYSDRERQKQPNTPEEDVEVSCFN
MTLTVDPKPNAGTSQQINIVSRSSCYPPSSPHLSLMRGLEPPHFSTLPSPQPPRSPALLV
SEMNNTTPNLPPSKTTPTQTPTPTSGGGSSSTSSRSRTPLSLAQQKYKKGDVVCTPNGIR
KKFNGKQWRRLCSREGCMKESQRRGYCSRHLSMRTKEMETAGGGGGGGGSSSGTVTPDLR
GRASSEFEWDDTSRESSETGSRGNSRPRLVLPSLLPHDLSSRFDFDECEAATMLVSLGSS
RSVTPSFSPISNQSPFSPAPSPSPSPLFGFRPANFSPITASPVLQHRRHRQPSGTGGSKV
TTPAGGGERERHTSGIQPSFHSNLMFTVPMSPSKRKPDAPPPPPLPSHHHDYTPKTELEQ
GDLNSFRVLSPQTSVSHSRTHTPTFSRPRGVTTPSSSRSPSSTAVSPPPLLVSPTPPSPL
TPDGGPRRVVPVSQQALRDSPVIVRNPEVPLAKFTECPLGRGGGGNEGETDKTSSTDIGL
TPLTPQPISGLQIPVPINAAAATVPNGTVLLRSPAQTLVLVSPTPSSLPTTDTAATPLQA
LSVTVSTTVTAPAPSSTDSSVEREENRGAGFGGEVQQPVPCHPSPTALLPLILPAESLHP
VPRKDIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQSDASSQPGEGQHPVNHPQAAS
LKTECQGVAAQSQEPAEAPPIVERGPPSRPPPSSDEPPPEKEKGDAERERPDSETESDVD
DPFLPGVVPEQPLSTSPVKRRTQSLSALPKDGDKSSPGKREKDHIRRPMNAFMIFSKRHR
ALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRK
KSSSEGRGVPGGKDIRERSMSESTEPHSVELKGVGPGLVGVSERSTGKGHVGQLTRPRAF
SQSAMHSLERSDRGNTQALAELAQMCVDSGSQFSSHAPPLSQSQRGVSEDMTSDEERMVI
CEEEGDDDVIEDPYPSSSIDLKCKERVTDSDSENGSGDEGDRKRVFAPVICSSALSSSSH
HTPHGRSVSLSSYPSSKRYDEGRSGGGGFSDHRRKDRGEGEGKDTFGGEGGGGVQATSLS
LTSGHSVISTSPAGGHPSSSVGSLGGNPLLGIGTVRVASTVVTNVMRPVISTPLPIASKP
RDGGTSTSPHPPERKSLTPHQQPQFLIGSGSGSGVQAPGGGYYSSSSPNPLGAGLGPGGV
VTNLVLGGTLSAQPAVQLITPSHHPQPCQQQAFSSSAVSVPHSQTNGPLPLSLLHPQFLP
ASSLASPGGKAITQVQYILPTLPANPKSPPQQLSQPTSIFNLPTAPPTHMSLANGKQQGT
SSLTGYTSSSAVGVVSPGTRVQTQSPVLQGKMLVPMATVRTAPAPAQQFPIVAPPLPVQN
GAQTGSKIIQIAPMPVVQSQLPQGGAVHPASPFPVTVGTAAVVAPGSAPSQAVLLPPAPT
RITYVQSTPGVPSSLPLVSTTTGASTTQQALPVTGSAYVPSPLATLGFTAIAPPGQTLVQ
PLIAGQPPLLATAQSPQPSISAPASASGGQIVTAIYPPSPSVTMATGVVSMTAVPPSVVY
SVSSPSSTSSHILSKYTATPTTIMNPHPQPHLDRQADRHLPPDRPADRQTDRQAERQTEL
LTHSDRPLERQASTNSSSVAPPGGSAVSIRPCSPPLQIQTPGSTPGTPKLTQHPVRTPQK
VKATVANIPVGSYEGGGRGKEREREKEREREREREAAATSRFSFDPELAGQTGSPSTHPA
EEPPSSDRTLEGSSVPDSSDTRHRESTSTKETGWRESLPSSPLPPPSATEPSLPPPQTDK
DGPTPKKVKARPPPLKKTFDSVDKSGRVLSEVYFEERFAELPEFRPEEVLPSPTLQSLAT
SPRAILGSYRRKRKNSTDLDSATDEQVSPKRKSRRRSSCSSEPNTPKSAAKCEGDIFTFD
RAATDGEDILTDLEFDKVPYSSLRRTLDQRRALVMQLFQEQGFFPSAQATAAFQTRYSDI
FPTKVCLQLKIREVRQKIMQTAAPSDVSGLGIPDSIGNLPGPSSSQSGEGYMRGGDLQDE
DMEQGTEGSPEDPRDSKDSSR
NT seq
8166 nt
NT seq
+upstream
nt +downstream
nt
atgagaccattaaagaaaaacagagggcgttctcccccattaactagaggcagagggggg
cgaaggagagggggctcacagcctctcctggagaaagaacccaaaagagtcaagagggag
acacttgtcaaaaccacacagtatacacccaacactcccacacacaaacagaccctgccc
acattcgccaactctaatgaagacccaatcacaaacagcaatacccccacgatggaggag
tctactgagctgaggaaacctgtggagtcagttgagaaggagggtaagaaggcagaagaa
aagacagaaaaggagaagatagtgggcacaaatggaaatagtgctgtggccactgaatct
gtagcatttcctacctcttctccagtgccactctccacagccacgccccctctggccacc
aatcacagccccaatttaggctcagtctctagtaggaaaacagccacctttaaggctcgt
gtacccaagaaaaaatatacatatgagcactttgctaacaacgcaaatgccctgactacc
attcctacctccagacctgcacacatacacaacaattactgcaatattaacagcaaaata
agtgatagtgtgaatacgcccaataataatttcaagagtagtaacaatattaataatagc
attaatgttagcatcaatagcagtactaacaataacactacaaaaggtattaacaacatg
actaacagtagtgctgggagccataatacttttatcaatagcagtaatagtagaagtaat
aattgctcaggtaatcagtcatcagtcttaactgtggatagtagagctacagaagcaaag
tgttttgtttccacggaggataaagccctcaggacagcagattcccaagctggggaaaat
gagtcagagggggccccttactcagtgcgctcctcatccactgatacagctagtgagcac
tccgctgacctagacatgatggaagcagcaggacaaagccttcatcaaaagaactccaac
tacccagctcctctccataacttgcaccataaagaggccagtctttcagagggactagcc
gaagttctggctaaaggcatgaaaaaccagagagttcttgctcgccagataaagaggact
atggagagtggggttagggctacagggaacagaggggttaaggagattaactcatgccct
ttattatctgtgttcagaccaggggtggtgcgtagggtgagtggaggtattgttgaagtc
cagctccaaggagaggagactcttgttaaataccctttccatggtggaaccatgatgaca
tcgtcatcaggggctgagagcactgtggagtttattttggatgcccccccacctggcatg
gcaccggtggcagtcaggactcgagtgtgcgtgccctttggtggagaggaggggggtcct
ctgctgtacagagaggggattatcactcaggtggacccccaccccggtgtgtcatttcct
taccaggtgcttctaaatgaagacagagagactctggacaatggaggggtgggggaagag
aaagagaaaaggaaagctaatgctcggactgtgtgggtgtcccgacaaagtctgaggctt
ctcacccctccttgggaggtcccacatttggatggtgggagggcaaaggaaagagagcgg
gagagggaaagagaagagagggagcggagggaggagatggaggtagagagggaagtgtgc
cagttgagtattgggatgggggtgctgggagggggagcaaggttaggccatagtttttca
catgaaggggttgtaggtgggcatccctatgtaaacgcacatccaccaccccattcctcc
accgtgacatctagtgtaggtggcagcacagttcatggctgcggagataactactctgac
agagagagacagaaacagccaaacactccagaagaggacgttgaggtatcttgttttaac
atgaccctcactgttgatcccaagccaaatgctgggacctctcagcaaataaacatcgtc
tccaggtccagttgctaccccccctcctccccccacctctccttgatgcggggtctggaa
cccccacacttctccaccctacctagtcctcagccaccccgttcccctgccttactggtg
tctgaaatgaacaacaccactccaaacctacctccatcaaagaccactcccactcagacc
cctactcccacttctggtggggggtcctcctctacctcctctcgctccaggactcccctc
tcattggctcagcagaaatacaagaagggcgatgtggtgtgcacccctaatggtatccgt
aagaagttcaatggtaagcagtggcggaggctgtgctccagggagggctgtatgaaggag
tctcagcgtcgaggatactgctcaagacacttgtccatgaggaccaaagagatggagaca
gcggggggaggggggggaggaggaggcagcagctcagggacagtcacccctgacctgcgg
gggagagcaagcagtgagtttgagtgggacgacacatcaagagagagcagtgagaccggt
agcagaggaaactccagaccccgcttggtcctcccctccctcctcccccatgacctgtcg
tcacgctttgacttcgatgagtgtgaggccgccaccatgcttgtgtcattaggcagctcc
cgctctgtcaccccctccttttctcccatctctaaccagtcgcccttctcccctgccccc
tctccctcaccctccccactgttcggctttaggccggccaacttctccccaattaccgct
tccccagtcctccaacaccggaggcacaggcagcccagcgggacagggggcagtaaggta
acaaccccagctggaggaggagaaagggagagacacacttcgggtatccagccctccttc
cacagcaacctgatgtttacagtccccatgagccccagcaaacgaaagcccgacgcacct
cctccaccacccctcccctcacaccaccatgattacacacccaagacagagctggagcag
ggggaccttaactctttcagggtgttgtccccccagacatcagtttcacattcccgcaca
cacacaccaactttctcccgacccagaggagtgaccaccccctcctccagtaggtcaccg
tcttccactgctgtctcccctcctcctctgctggtgtctccaactcctccttctcctcta
actccagatggagggcctcgtcgtgtggtccctgtatcccaacaggccttgcgggactcc
cctgtcattgtgagaaatcccgaagtcccactggcaaaatttacagagtgtcccttagga
agaggaggaggtggaaatgagggagagacagataaaacctcatctacagacatcggccta
acacccctcacccctcagccaatttcaggcctccagattcctgtccccattaacgctgct
gcagccacagtaccaaatggcaccgtccttttgcggagcccagcccaaactctggtgctt
gtgtccccgacaccctcctccctgcccaccactgacaccgctgccacccccctgcaggcc
ctgtcagttaccgtcagcacaacagtcacagctcccgctccaagtagcactgacagctct
gtggaacgagaggagaacaggggggcagggtttgggggtgaggtccagcagccagttccc
tgtcacccttctcccaccgctctgctgcccctgatcctcccagctgaaagccttcaccct
gtcccacgaaaggacatcatcatgggacgtcctggcacagtatggaccaatgtagagccc
cggtcagttccagtcttcccgtggcattcattagtccctttcctggcacccacccaatca
gatgcttcttctcagccaggagagggccagcaccctgtcaaccatccccaagcagccagt
ctgaagacagagtgtcagggggttgcagcgcagtcacaggagcctgcagaggcacctccc
attgtagagagaggtcctccttcccggcctcccccctcttctgatgagccgcctccagag
aaggagaaaggagatgcagagagggagaggcctgacagcgagacagagagtgacgtggat
gaccccttcctcccaggagttgtaccagagcagcccctctctacatcaccagtaaagaga
cgcactcagtccctcagcgcactgcccaaagatggagataagagcagccctggaaagagg
gagaaggaccacatccggcgaccaatgaatgcatttatgatttttagtaagcgtcatcgc
gcattggtgcaccagcggcacccaaaccaggacaacaggacagtcagcaagattcttgga
gagtggtggtatgctctgggacctaaggagaaacaaaagtaccatgatttggctttccag
gtaaaagaggcccactttaaggcccacccagactggaagtggtgcaacaaagacaggaag
aagtccagctctgagggccgtggggtcccagggggcaaagacatcagagagaggagcatg
tctgagtccacagagccacattctgttgagctgaagggggttggtccaggactggtgggc
gtatctgaaaggagcacaggaaaaggtcatgtgggccagcttacccgtcccagagccttc
tctcaaagtgccatgcacagcctggagcggagtgatagaggcaatacacaggccctggca
gaactggcccagatgtgtgtggacagtggcagtcagttttcgagtcatgccccacccctg
tcacagtcccaaaggggggtcagtgaggacatgaccagtgacgaggagcgcatggtcatc
tgtgaggaggagggagatgacgatgtcattgaggacccttatcctagcagttccatagac
ctcaagtgtaaggagcgggtgactgacagcgatagtgagaacggttctggagacgaaggt
gatcggaagagagtttttgctccagtcatttgctcctctgcattatcatcttcctcacac
catacccctcatggtaggagtgtctcactgtcctcttaccccagcagcaagcgttatgat
gaggggagatcaggagggggagggttttcagatcacaggaggaaggatagaggagaggga
gagggtaaggacacatttgggggagaggggggaggaggagtgcaagccacatctctctcc
ctcacttctggccattcagtcatctccacttctccagctggagggcatccttcctcatca
gtaggttcactgggggggaacccactcctgggcattggcactgtaagggtggcatctaca
gtggtgaccaatgtaatgcgtcctgttatcagcacaccgctccccatcgccagcaaaccc
agagatggaggcacatcaactagcccgcatccgccagagaggaagtccttgactccccat
cagcagccacaatttctgattggctcaggatcaggaagcggggtccaagccccaggtggt
gggtactactcttcatcatcacctaatcctttaggtgcaggcctgggccctggtggtgta
gtgactaatttggtgttaggaggaactctgtctgctcaacctgctgtacagctcatcacc
ccttcccaccaccctcagccctgccagcagcaggccttttcctcctccgctgtttcagta
ccgcatagccaaaccaacgggcccctgcctctgtccctgcttcatccccagttccttcct
gcctcttccctagcatcccctgggggtaaggccatcacacaagttcagtacatcctgccc
accctaccagctaaccccaagagtccacctcagcagctcagccagccaaccagtatcttc
aacttgcccacagctccacccacacacatgtccctggccaatggaaagcagcaggggaca
agttcactgacaggatatacgtccagctcagcagtgggtgtggttagcccgggaactaga
gtgcaaacacagtctccagtgctccagggcaaaatgcttgttcccatggcaacagtacgg
acagcaccagcccctgcccagcagtttcccattgtggccccacctcttccggtccagaac
ggtgctcagacaggaagcaagatcatccagatagctcccatgcctgtggtccagtcccag
ctgcctcaaggtggagcagtccaccctgccagccccttccctgtaacagttggcacagct
gctgttgtggctccaggatcagccccctcccaggctgtactcctgccaccagctcctacc
aggatcacctatgtccagtccactccaggggtcccatccagtctgcctctggtctccacg
acaacaggtgcttccaccacccagcaagccctgccggtgactggatctgcatatgttcca
tcgcccctggcaacacttgggttcacagccatcgcaccacctggacagacgctagttcag
ccactgattgcgggtcagccaccgctcctagccacagctcagtctccacagccttccatc
tcagcccctgcctcagcctccgggggccagatagtcaccgccatctaccctccttcacct
agcgtcaccatggcaacaggtgtggtctccatgacagcagtaccccccagtgtggtctac
tccgtctccagcccttccagcacttcctctcacatcctgtccaaatacacagcaaccccc
actacaatcatgaacccacatccgcagccccatctggacagacaggcagacaggcacctg
cctccggacagacctgcagatcgacaaactgacagacaggctgagaggcagacagaactg
ctgacacattcggacagacctctggagaggcaggcctccaccaatagcagctcagtggct
cctcccggtggctcagctgtgtccataaggccctgcagtcctccacttcagatccaaacg
cctggcagtacaccaggtacacccaaactaacccagcatccagtcaggacccctcagaag
gtgaaggcaacagtggcgaacatccccgtaggcagctatgaaggaggaggccgaggtaaa
gagagagaaagggaaaaggagagggagagagaaagggagagagaagctgcagccactagc
cgcttctcctttgatcctgagctggcggggcagacagggtctccatcaacacatcctgct
gaggagcctccgtcctctgacagaaccctggagggctccagtgttccagactcctctgac
acacgacaccgagaaagcacaagcaccaaagagactggatggagagagtccctcccctcc
tcccctctcccccctccatcagccacggaacccagcctgccacccccacagactgacaaa
gatggtcctacacccaaaaaagtcaaagcccgcccaccaccacttaagaagacctttgac
tcggtggacaagtctggcagggtgctgtcagaagtgtattttgaggagcgctttgccgag
ctgccagagtttcggcctgaagaggttttgccttcacccaccctgcagagtctggccact
tcaccccgcgccattctgggtagctaccgtcgcaagaggaagaactctacagatttggac
tcagccactgacgagcaagtctctcctaagagaaagagtcggcggcgctcaagttgcagc
tcagagcccaacacgcctaaaagtgccgccaaatgcgagggggacatcttcaccttcgac
agagcagccacagacggagaagacatcctgacagatctggagtttgataaggtgccgtac
tcctcgctgcggcgaacactggaccagaggcgagcgctggtcatgcagctgttccaggag
cagggcttctttccatcagctcaggccactgcagccttccagacgagatactctgatata
tttcccactaaggtgtgtctgcagctgaagatcagggaggtccggcagaagatcatgcag
acggctgccccctctgatgtctctggtttaggcatccctgactcaattggcaacctccct
ggaccttctagctcccagtcaggagaaggatatatgagagggggggacctgcaggatgaa
gacatggagcaagggacagaggggagcccagaggatcctcgtgattcaaaggactcttct
agatga
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integrated database retrieval system
