KEGG   Sander lucioperca (pikeperch): 116049814
Entry
116049814         CDS       T07345                                 
Symbol
focad
Name
(RefSeq) focadhesin
  KO
K27498  focadhesin
Organism
sluc  Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sluc03019]
    116049814 (focad)
Messenger RNA biogenesis [BR:sluc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     116049814 (focad)
SSDB
Motif
Pfam: Focadhesin DUF3730 MOSC
Other DBs
NCBI-GeneID: 116049814
NCBI-ProteinID: XP_031155639
Ensembl: ENSSLUG00000005478
LinkDB
Position
17:1094693..1186157
AA seq 1801 aa
MTESLKIGFDFPSPVIQAQTVRHLVAAVLKEKGPNGQITQSSTQGLALEALWQQCCSDCT
LVRSAVCDAIVLLVEQGHADLHYVLNSVLNLLPSARNVQGLIKVIGRLLQMQADQRDRET
AFTCPYSIRSSPHPYITALEHRADCWPTLLLEIDDFIQQAADRNEAVYISMLAPFLCYLY
CEPQRQTQHALLRHSLLRVLLPPQPGAGTVLQSSTVSDSLLLCLCQLVPHMQVDSVEAVL
ELCGFLGALLQGLAPATEQRWRSQRVGLLLQLLCACQRCLKLNGDCRPLLNVLQQLLPAC
QQELPLDELLMGVAMLLLEVPASQQTSLLHLALTLVCEQAELAPWLSPILVLPVLQLLSC
AALSEPLADRRTHSLNQDLAHRLLRSISSRGTEKPRQSSPPLALPLTSWYSELSVTLSTL
RRVADDPAATADWLLSLNSALLSNQSQLCSLSLMVSHLIITAQEDVCQLALKASQAIAAA
EPCQVPSLLPVLLFKLGKENNPALAHAVLNCLPNLGTHKLCVPMVLQTLHMLASAPKLRA
VALRLMTALWKKQDRVYPELQRLLGQQDSRVVVGRDFQWEQILARAACLRDVCRERPYQH
GGDMLAAIILTLNQCTRPDMATPAALALQGLQELCRAEVVDIVSTWRSLGPELSCDSRPL
MVRVIAELLALVPQLTAKSEEYEKLTQEVVSFLWNYAVSKDVEVASCGYRALADFPEAVH
TINLLPEAARPAAKPPGNDQDEQGKEEEEEAKDLSIPASSYVKLMALTPVSVLPAFELFL
TSLVKQEMSQMPRGVYFSALRGGNLRSDQGKTMAGIPSFMLKTYEKNKQPGLKPGLAAGL
LLCYELPVQTDRDGRPIDRFLLSRSRSYQQTLAALIHEVNIQPSEWHRALLLPQAWRGFM
SRAFHAVLQGRRADLEMQQKQGKEEAQELQYKQHCAWLWARDQLTDIIKAAAKDSPVVQG
NSILALSSLAAVLAKYESNLPADSDGSLRAGPEFVPTASWLAMVLHTLLSISSSSCKARG
QVFPWFLHRSYSGENTASAIARSCASLALSLLVPVLVVWQRDGLAQVLSALQASLPGSPT
ADDSQAVQFHSGLALGMVLSSLQQQRLSDVSVDADLLSSSLDALESCSFNPDLEYNTGCM
LGLALVLAALCSSGQTDQHVRITQTLDKLLSNLQDSSGQGRMLQEVLAYSVACVGVSAFG
GGLIDAAKAEEVMSTLRTLTEESQQTPGFSLALGLVVQGLSVSGHGKAEDIHPRLLAAWI
KILLAEGCPTMQRLAAVNGLVALVGSESYLIQQSRELELSSQQQSRLNEVIRAITQIISF
SGAIGLQSNSACLVGHLHLAHMSTSHSHTAVPQDFSYLSEKSLIRSIIDFLTEAGKKGPE
FAHPAMVKTALTPLASVGASFQYPPINWSAVLSPLMRLSFGEDVQHQCVVLAACQAQSSQ
SAGLFLGSWLSPPLVHSLSSQTRAQLYESLGLWMKHVAEDKLQVHMESLGLQHFQEELRP
QRLSLCRSLLQGLAQAMALPNPPNSCWTILCSSSEKIFSLMPNHIQDNEVDLYVGIAKCL
SEMSDAEIERITRVTEVHMEKTCFVLAYLTSQGRVPLLGLNDVIAGVLRGWPSRRVGWLL
LQTFYQCRLATNPNTGVLKRMEWLLELMGHIRNVAYGATPVTCGDTKPATDFLFQVFAAA
VVSWGDHFMPRLLGIRAQWFPWQPDSKPQTLHHSLYGEESLTDHALPQCMLGMSHSLAQL
LDKEPWSSQAHKFIDWLFSITEGPEQNLSAATISTAKAALLALKSSAEFKKKAVWTRAYG
W
NT seq 5406 nt   +upstreamnt  +downstreamnt
atgacggagagtttgaagataggatttgatttccccagccctgtcatacaggcccagacg
gtgagacatcttgttgctgctgtgctaaaggagaaagggccaaatgggcaaatcacccag
tcctccacccagggtctagcgttggaggctctgtggcagcagtgctgcagtgactgcacg
ctggtgcgttcagccgtctgcgatgccattgtgctgctggtggagcagggccacgcagac
ctgcactacgtcctcaacagtgtcctcaacctcctgccctctgctagaaatgtccagggg
ctgatcaaggtgattggtcggctgctccagatgcaggcagaccagagggacagagaaaca
gccttcacctgtccttactccatcaggagcagccctcacccttacatcactgcgctggag
caccgagcggactgctggccaaccctgctgctggagattgatgacttcattcagcaggct
gctgacagaaatgaagcagtctacatcagcatgctggcccccttcctatgctacctgtac
tgtgaacctcagaggcagacccagcatgccctcctgcgccacagtctcctgcgggtgctg
ctgcccccacaacctggagctgggacggtcctgcagagctcaacggtgtccgacagcctg
ctgctctgcctctgtcagctggtgccacacatgcaggtggacagtgtggaggcggtgcta
gagctgtgtgggttcctgggcgctctgctccagggtctggccccggccacggagcagcgc
tggaggagccagagggtcgggctgctgctgcagctgctctgtgcctgccagcgctgcctc
aagttaaacggagactgccgacctcttctcaacgtgttacagcagctcctacctgcctgc
caacaggagctgccattggacgagctgttgatgggagtggccatgctcctgctggaggtc
cctgcatcccagcagaccagcctgctccatctggctctgaccttagtgtgtgagcaggct
gagctggcgccctggctgagtcccatcctggttctccccgtgctgcagctgctgtcctgc
gcggccctcagcgagccgctggccgaccgacgcacacacagcctgaaccaggacctggcc
catcgcctgctgcgcagcattagcagcaggggcacggagaaaccccggcagtccagtcca
ccattggcacttcccctaacttcctggtatagcgagctcagcgtgactctatccacactg
cgtagagtggcagatgaccctgcggcgacagctgattggctgctgtcgctcaactctgcg
ctgttgtccaaccagagccagctctgctccctcagcctcatggtgagccatctgatcatc
acggctcaggaagacgtctgccagctggctctgaaggccagccaggccatcgctgcagcc
gagccctgccaggtcccttcccttcttcctgttctgttgttcaaactgggaaaggaaaat
aatccagcgctggctcacgctgtgctgaactgcctgcccaacctcgggactcacaagctc
tgtgtccccatggtgctacagactctccacatgctggccagcgccccaaagctgagagca
gtggcactgcgtctcatgaccgctctgtggaagaaacaggaccgagtgtacccggagctg
cagcgtctgctgggccagcaggacagcagggtggtggtagggagggacttccagtgggag
cagatcctggcccgggcagcctgcctcagggacgtctgcagggagaggccgtaccagcat
ggaggcgacatgttggctgccattatactcactctgaaccagtgcaccagaccagacatg
gcaacccctgctgctctcgccctgcaaggactacaggagctgtgccgggcagaggtagtg
gacatcgtgtcaacgtggagaagtctaggccccgagctgagctgtgactcgcgtccactg
atggtccgagtcatcgctgaacttctggctctggttccccagctcactgccaagtcagaa
gaatatgagaaactgacacaggaggtggtcagctttctctggaattatgctgtgagcaag
gatgtggaggtggccagctgtggttacagggctttggcagattttcctgaagcggtccac
accataaatcttcttcctgaggcggcccgaccagctgcaaagccccctgggaatgaccag
gatgaacaagggaaggaggaggaggaagaagcgaaggatctctccatcccagcttcatct
tatgtaaagctgatggctctcacccctgtctctgttctaccagccttcgagctcttcctg
acctcactggtgaagcaggagatgagtcagatgccacggggggtgtacttctctgccctg
aggggggggaacctgcgttcagaccagggtaaaacaatggcagggattccctcattcatg
ctgaaaacctacgagaaaaacaagcagcctgggctgaagcctggactagcagctggactg
ctgctctgttatgagctacctgtgcagacggaccgtgacggcagaccgatcgatcgtttc
ctcttgagccgcagccgcagctaccagcagaccttggcagccctcattcatgaagtgaac
atccagccgtctgaatggcaccgtgctctcctcctgccccaggcctggcgagggttcatg
agccgagcgttccacgctgtcctacagggtcgacgtgctgatttggagatgcagcagaaa
caaggcaaagaagaagcacaggagctgcagtacaaacaacactgtgcctggctgtgggcc
agagatcagctgacagacatcatcaaagctgctgcaaaggacagtcctgttgtccagggg
aactccatcctggctctgagcagcctggctgctgtcctggctaaatatgagagcaacctg
cctgctgatagcgacggcagcctcagggctggcccagagtttgtgcccacagccagctgg
ttggccatggtgctccacaccctgctcagcatcagcagcagcagctgcaaggccagagga
caagtcttcccatggttcctacatcgctcctactcgggggagaacacagcgagtgctatc
gctcgctcctgtgccagcctggcactgtccctgttggtcccggtgctggtggtgtggcag
cgggacggtctggcccaggtcctgtcggcgctgcaggccagcctgccaggctcccccact
gccgacgactcccaggctgtccagttccactcgggcctggcgctcggcatggtgctgtcc
agtctgcagcagcagcgcctgagtgatgtctctgtggacgctgatctcctctccagctct
ctggacgctctggaaagttgctccttcaaccccgacctggaatacaatactggctgtatg
ttaggcctggctctggtgctcgcagctctctgcagtagtggacagacggatcaacatgtc
cgcatcacccaaacactggacaaacttctgtccaacctgcaggacagcagtgggcaggga
cgcatgctgcaggaggtcttggcgtactctgtggcatgtgtgggtgtctcagccttcggc
ggaggccttatagatgctgccaaggctgaggaggtgatgagcactctgcgcaccctgact
gaggagagccaacagactccaggcttctccctggctctgggcttggttgttcaaggcctg
tctgtgtccggccatggcaaagcagaggacatccatcctcgtctgctggctgcttggata
aagatcttattggctgagggttgtcccactatgcagcggctggcggccgtcaacggcctg
gtagctctagtaggatctgagagttacctcatccagcaaagcagagagctggagctttcc
tcccagcagcagagccggctgaacgaggtcattcgagccatcacacagatcatatcattc
tcaggagccattggtctgcagtccaacagtgcttgtttggttggtcatctgcatctggcc
catatgtccaccagtcacagtcacacagcagttcctcaggatttcagttacctctcagag
aaaagtctcatcagatccatcattgacttcctcacagaggcaggaaaaaaaggtccagag
tttgcccatccagctatggttaagactgctcttactcccctggcgtcagttggagccagt
ttccagtacccgcccatcaactggagcgccgtgctgtctcctctgatgaggctcagcttc
ggagaggatgtgcagcatcagtgtgtggtgctggcagcgtgtcaggctcagtcttctcag
agcgccggcctctttctgggctcctggctctcacccccccttgtgcacagtctcagttcc
cagactcgggctcagctgtatgagagtctgggcctgtggatgaagcatgttgctgaggac
aagctgcaggtccacatggagagtctgggcctgcagcacttccaggaggagctccgcccc
cagcgtctgtccctgtgccgctccctgctgcagggcctggctcaggccatggctctccca
aacccccccaacagctgctggaccatcctctgctccagctcggagaagatcttctccctg
atgcccaaccacatccaggataatgaagtcgatttgtatgtgggaatcgccaagtgtctg
tcagagatgtcggatgcagagattgagcgaatcacacgagtcacagaggttcacatggag
aagacctgcttcgtcctggcttacctgacctcccaaggcagagttcccctgctgggcctc
aatgatgtcatcgccggggtgctccgtggttggccgagccgcagagttggctggctcctc
ctgcagactttttaccagtgtcgcctggccaccaatcccaatacaggcgttttgaaacga
atggagtggctcctggagctgatgggacacatccgaaatgttgcatatggtgcaaccccg
gtcacatgtggagacaccaaaccggccacagacttcctgtttcaggtttttgctgctgct
gtagtttcctggggtgaccacttcatgccccgcctccttggcattagggcccagtggttc
ccatggcaacccgactccaagccccagactctgcatcacagtctgtatggtgaagagtca
ttgactgaccatgccctgcctcagtgcatgctgggaatgtcccacagcctggctcagctg
ctggacaaagagccttggagcagccaggcacacaagttcatagactggctcttcagcatc
acagagggtcctgaacagaatctgtcagccgcaaccatcagcacagccaaagcggccctg
ttggccctcaagtcctccgctgagttcaagaagaaagctgtgtggacccgagcatacgga
tggtag

DBGET integrated database retrieval system