Sander lucioperca (pikeperch): 116049972 Help Entry 116049972         CDS       T07345                                  Symbol casc3 Name (RefSeq) protein CASC3   KO K14323   protein CASC3 Organism sluc  Sander lucioperca (pikeperch) Pathway sluc03013   Nucleocytoplasmic transport sluc03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:sluc00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     116049972 (casc3)    03015 mRNA surveillance pathway     116049972 (casc3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sluc03019]     116049972 (casc3) Messenger RNA biogenesis [BR:sluc03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      116049972 (casc3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Btz Motif Other DBs NCBI-GeneID:  116049972 NCBI-ProteinID:  XP_031155884 LinkDB All DBs Position 21:complement(3428067..3459061) Genome browser AA seq 785 aa AA seqDB search MADRRRRRRTRRASQDSEDDDESGSGSDSGRSASPTTKPRVRDPEPPEETAAAIRPEPKP VVESECESEDGVGEAVLSDYDSADAEENGSHSEGAEEEEEAEQYSDEEAPAAAASEPKPS DAVAAADEPAKVEGVEEEEEGEVVEEEGEDEEKEAESEEGGQSKEDSKAEEKGNIAGERQ SGDGQESTDDPETKAGGKPGQKLDDDEDRKNPAYIPRKGLFFEHDVRGHAQEEERPKGRN RKLWKDEGRWEHDRFREEEQAPKSREELIAIYGYDIRNGGGSGDRHYRQQRRPRQSTSPS RDKRWRDGGAERPVRSWQQSAAPNRGGAPPSSTPPSSVPPSSLPLSSSQRSGNPSRPPPS RSRPSYQNQMHPAPQSQYRNSDSNAPQMHPRERQGPKAQSDPAGDRGVGSRGGGGRGPSV VVEDIAFSHGGVREQDLGVATTAASQSASPRRQQQEQRSGADRPASGLAHSALDASSPST NREASPPTERPAMERKSYSLARRTRSRPADLGSKQPSVEESAAAGGNNATAAASPGAAVG GKSWAGAGDGPSQTGVTGGLAEMDQNLARLSLAGQSWSQSPTSYFRSEMKGLPNAMHIPG GPPPFSAMEEMGAGSNRAKRYSSQRQRAVPEPAPPMHLGVMEGHYYEPMSYQGPIYAHGD GPAPIPPQGMLVQPEMHIPHPGLHPHQSGGPIANPPLYGGPPVSLPPGQPQQLLPPPFYP PPGVMTFPYPTMYPTPQGQAQVTYGGVTYYDTMQQQAQPKPSPPRRTSQPVTIKPPPPEL HFATE NT seq 2358 nt NT seq  +upstreamnt  +downstreamnt atggcggaccggcggcgaaggaggaggacgaggcgcgcgtcccaggacagcgaggacgac gacgagtctggttcgggttcggacagcgggaggtcggcctccccgacgaccaagccccgc gtgagagacccagagccgcccgaggagacagcagcagcgatccggcccgagcccaaaccc gttgtggagtccgaatgtgagagtgaagacggagtaggagaagctgtcctctctgactac gacagtgctgacgcagaggaaaacggctcccattcagagggagcggaggaggaagaggag gcagagcagtacagcgacgaagaagctccggcagcggcagccagcgagcccaaaccctct gacgctgttgctgcagccgacgaaccggcaaaggtagagggggtggaagaagaagaggag ggggaggtggtggaggaagagggggaggatgaagagaaggaggcggagtcggaggaagga ggacagagtaaagaggacagcaaggccgaggagaagggaaacatcgccggggagagacag agcggcgacggacaggagtctacggacgaccccgagacaaaggcgggggggaaaccgggg cagaagctcgacgatgacgaggacaggaagaacccggcctacatcccgaggaagggtctg ttcttcgagcacgatgtccgaggacacgctcaggaggaggagagaccgaaaggtcgaaac aggaagttgtggaaggacgagggtcgctgggagcacgaccgcttcagggaggaggaacag gcgcccaagagccgcgaggagctcatcgccatctacggttacgacatcagaaacggcggc ggctccggagaccgacactaccggcagcagcgccggccgagacagagtacgtctcccagc agagacaagcggtggagagacggaggcgcagagcggccggtccgatcctggcagcagagc gccgctccgaaccgaggaggcgctccgccttcatccacccccccgtcctccgtgcccccc tcgtctctccccctctcctcctcccagcgcagcggcaatccctcccggccgcctccctcc cgcagccgaccctcctaccagaatcaaatgcaccccgcgcctcagtcccagtaccggaac agcgactcaaatgcgccccagatgcaccccagggagcgacagggccccaaagctcagtcc gaccccgcgggagacaggggcgtgggcagcaggggcggcggggggaggggcccctccgtg gtcgttgaggatattgcgttcagccacgggggcgttcgggagcaggacctaggtgttgcg acgacggcggcgtcccagtctgcgtcaccgagacgacagcagcaggagcaacgcagcggt gccgacagacctgcgtccggattggcacattccgccttggacgcctcgtcgccgtcgacc aatcgggaggcctctcctcccaccgagcggccggcgatggagcgtaaatcgtactcgctg gctcgcaggactcgctctcggcccgccgacctgggcagcaagcagccgtccgtggaggag tcggccgcagccggggggaacaacgccaccgccgctgcctcccccggtgccgccgtggga gggaagagctgggcgggggcgggcgatgggccaagccagacaggagtcacgggagggctg gcggagatggaccagaacttggctcgactcagtctggcgggacagagctggagccagagc ccgacgtcctacttccgctcggagatgaaaggcctgcccaacgccatgcacatccccggc ggaccgcctccgttctccgccatggaggagatgggtgccggctccaatcgagccaagcgc tactcgtcccaacggcagagggccgtgcccgagccggcgccgcccatgcacctgggagtg atggagggacactactacgaacccatgtcgtaccagggaccaatctatgcccacggggac ggccccgcccccatcccgccgcaaggcatgctggtccagccagagatgcacatcccccac cccggtctccatccccaccaatcgggcggccccatcgctaaccccccgctgtacggcggc ccgcctgtttcgctgccgccgggccagccgcagcagctgctgcccccacctttctaccct ccgccgggcgtcatgaccttcccttaccccaccatgtacccgactccacagggtcaggcc caggtgacctacggaggcgtgacgtactacgacacgatgcagcagcaggctcagcccaag ccctcgcccccccgccgcacctcccagcccgtcaccatcaagcccccccctccggagttg cacttcgccacagagtga

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