Sander lucioperca (pikeperch): 116050378
Help
Entry
116050378 CDS
T07345
Symbol
gbf1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X4
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116050378 (gbf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116050378 (gbf1)
Membrane trafficking [BR:
sluc04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
116050378 (gbf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
TNFAIP8
DUF1045
SelK_SelG
Motif
Other DBs
NCBI-GeneID:
116050378
NCBI-ProteinID:
XP_031156255
Ensembl:
ENSSLUG00000020311
LinkDB
All DBs
Position
7:complement(29316553..29442072)
Genome browser
AA seq
1881 aa
AA seq
DB search
MVDKNIYIVQGEISTVVGAIKRNSRWNTHTPLDEEQDPLLNSFGHLKEILNNIKELSDVE
PNVFLRPFLEVVRSEDTTGPITGIALTSVNKFLSYGLIDANHEAAAEAIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKS
AEHTLVDMVQLLFSRLPQFKEEAKSYVAANMKKLKMRAGGITESSKWKKQKRSPRQSRHM
VRSPSGQMDSTQSSTLSNNNILGGVPFIEQGLSTSGLPASDSAGSSVSSPTTTDSGLGTC
SKAASREDLSDLEQCYSSATTPGTAATLPGTETGSPDSQSEGRQVETPQSASVESIPEVL
EDRDANTEQSDSPSIHDIDYVNPRGVRFTQSTQRDGASLIPYGLPCLRELFRFLISLTNP
HDRHNTDAMMHMGLQLLTVALESAHITNYQSLLGLVKDELCRHLFQLLSVDRMNLYASSI
RVCFLLFESMRVHLKFQLEMYLKKLMDIITSENMKMPYEMKEMALEALVQLWRIPSFVTE
LYINFDCDYYFSNLFEDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSTEAHCQAKVL
NSTAQQDQSDTLLAEGEGSTQNPTDTTTDLNRLASTNGVSLPQVENAPACPPTSGHLMAE
KMILGRQDQGDNDTAEKRALKKPQRFSSCLPDSQELMDIRTKKKLLITGTEQFNQKPKKG
IQFLQEKGLLSNPIDNNQVAQWLRENPRLDKKMIGEYISDRKNMELLDSFVNTFTFQGLR
IDEALRLYLEAFRLPGEAPVIQRLLETFTDNWHKVNGSPFMTNDAGFALAYAVIMLNTDQ
HNHNVRKQNIPMTIEQFKKNLKGVNGNKDFDQDMLEDIYNAIKNEEIVMPDEQTGLVKDN
YVWSVLLHRGATPEGLFLHLPAGSYDHDLFTMTWGPTIAALSYVFDKSLDDNIIQKAITG
FRKCAMIAAHYGFSDVFDNLIISLCKFTTLSSESVENLPTVFGSNNKAQTAAKTVFDLAH
RHGNILREGWKNIMDSMLQLFRAELLPKAMVEVEDFVEPNGKISLQREETPSNRGESAVL
SFVNWLTLSGAEQSGLRGPSTENQEAKQAAILCIKQCDPEKLITESKFLQLESLQELMKA
LISVTPDEETYDEEDAAFCLEMLLRIILENRDRVSCVWQTVRDHLCHLCVHPNESCFLVE
RAVVGLLRLAIRLLRREDVSSQVLLSLRLLLMMKPPVLARVSREVAYGLHELLKTNAANI
HCTNDWFTLFSLLECIGAGVKPPASFQLTSSTPDSDTGAQSDSELPSPHLSEVSSERGYT
SDSGVYTEHSKTRIPRSATDVDVASSGWLVVGKDDLETSKTPLVNSKAQLNHPLVNQYSL
TLGQDLGQHDTKSLIKCVETLSFIVRDAAHVTPDNFELCVRAIRVFVEASLNGGYRNHDK
KKSHKYDSSKSRMRKKAGGRDKEGGGGPRRGGGRASSQRPSRSHSDEEEDEGVPASYHTV
SLQVSQDLLDLMHTLHTRAASIYSSWAEEQRHREAAGRKIEADSQTLWTSCWCPLLQGIA
WLCCDARRQVRMQALTYLQRALLVHDLQTLDATEWESCFNKVLFPLLTKLLDNISPADVG
GMEETRMRACTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAGSSDLLLEAIPES
LKNMLLVMDTAGIFHSADSRTGYSDLWEITWERIVCFLPHLREELFKQTVIPDPVPSPAA
EPVQPPPSAGQPSSPQVSPPPVQPPSPVPAPPAETQTPSRPASPQEPQPASANGNTAGSD
RSSPVPPSIPPLPVPLTTSPTQAPSPLSQSPLILQPLASPLQVGVPPMSLPIILNPALIE
ATSPVPLLPSPRATSPSDQVK
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaagaatatctacatcgtccagggtgaaattagtactgttgttggagctatc
aagaggaactccagatggaatacccacactccactggacgaagaacaggacccgttactt
aacagctttggccacctcaaggaaatactcaacaacataaaagagctgtcagatgttgaa
cccaacgtttttctgaggcccttcctagaagtggtccgctctgaggacaccactggacca
atcacaggcatcgccctcacttctgtcaacaagttcctttcctacggccttatagatgcc
aaccatgaagcagcagcagaagccattgagaacatggctgacgccgtcacacacgctaga
tttgtgggaacagaccctgccagcgacgaagtcgtcctcatgaaaattctgcaggtcctg
aggactctgctgctgacaccagtcggagcccatctgaccaatgagtccgtctgtgagatc
atgcagtcctgcttcaggatctgctttgagatgcgtctaagtgagctcctcagaaaatca
gctgaacatacactggttgacatggtgcagctactgttctctagactaccacagttcaaa
gaggaggccaagagttatgtggctgccaacatgaagaagttgaagatgcgtgccggtggg
attacagagtcatccaaatggaagaagcagaaacgctcaccgaggcagtctcgccacatg
gtccgaagtccctccggtcagatggactcgacacagtccagcaccctcagcaacaacaac
attttaggtggcgtcccgttcattgagcaaggcttgtccacctctggcctgccagcttca
gacagtgctggttcgtcagtttccagccctacaaccacagacagtggcctgggcacctgt
tcaaaagccgcctccagggaagacctctctgacctggaacaatgttactcgtcggcaacc
acccctggcactgctgctacgcttccagggactgagaccggctctccggattcacagtct
gagggcaggcaggtagaaacacctcagtcggcctcggtggagtccatccctgaggttctg
gaggacagagacgccaatacagagcagtcagacagcccctctatccatgacatagactat
gttaaccccagaggagtacgtttcacacagtccacacagcgagacggagcgtccctcatc
ccttatggcctgccatgtctaagggagctttttcgcttcctgatctcactgactaacccc
catgaccgccacaacactgacgccatgatgcacatgggcctgcagctgctgactgtagcg
cttgagtcggcacacattactaactaccagtctttactcggactggtcaaagatgagctc
tgcagacatctcttccagttgctgagtgtggaccgtatgaacctctatgcttcctccata
cgggtttgcttcttgctttttgaaagcatgagagtacatcttaagtttcagcttgagatg
tacctaaagaaactgatggacatcatcacgtcggagaacatgaagatgccctatgagatg
aaggagatggctctggaggcactggtccagctgtggaggattcccagctttgtcactgag
ctgtacatcaattttgactgtgactactacttctccaatctgtttgaggacctcaccaag
ctgctgtccaagaatgcgttcccagtgtcggggcagctgtacaccacccacctcctgtca
ctggaggctctgctcacagtgatcgacagcactgaagcccactgccaggccaaggtgctc
aacagcactgctcagcaagaccagtcagataccctgctggcagagggagaaggttcaacc
caaaacccaacagacactaccactgacctcaatagactggctagtaccaatggtgtgagt
cttccacaagttgagaatgcaccagcgtgtccaccaaccagtggccatctgatggcagag
aagatgattctgggtaggcaggatcaaggggacaatgacactgctgagaagagagccctg
aaaaagcctcaacgtttctcctcatgtttacctgattctcaagagttgatggacatcaga
acgaagaaaaagctgctgatcacaggcacagagcagtttaaccagaagcccaagaagggc
atccagtttctgcaggagaaaggcctcctcagtaaccccatagacaacaaccaggtggcc
cagtggctccgagaaaacccccgactggacaaaaagatgatcggagagtacatcagcgat
cgcaagaacatggaactcctggacagctttgtaaacacattcaccttccaggggcttcgt
attgatgaggccctgcggctctacctggaggccttcagactgcctggagaggctccggtc
atccagagactcctcgaaaccttcactgacaactggcataaagtgaacggctctcctttc
atgaccaacgatgccggctttgccttggcctacgctgtcataatgctcaacactgaccag
cataaccacaatgtccgcaagcagaacatccccatgactatagagcaattcaagaaaaat
ctgaagggggtaaatggaaacaaagactttgaccaggacatgttggaggatatctacaat
gctatcaagaacgaggagattgtgatgccagatgagcagacagggttagtgaaggacaac
tatgtatggagtgtgttgctccaccgtggcgccacacctgaagggctcttcctccacctg
ccagccggcagctacgaccatgacctgttcaccatgacctggggcccaaccatcgctgcc
ctctcttacgtctttgacaagagcctggacgacaacatcatccagaaggccatcaccggc
ttcaggaaatgcgcaatgatagcagctcactatggcttcagtgacgttttcgacaatttg
atcatctccctctgcaagttcaccaccctgagcagtgagtctgtggaaaaccttcctaca
gtgtttggcagcaataataaggcacagacagcagccaagacggtgtttgacctcgcccat
cggcacggcaacatcctgagggagggctggaagaacatcatggactccatgctacagctg
ttcagagccgagctgctgcccaaagccatggtggaggtggaggatttcgtggagccaaat
gggaagatttctcttcaaagagaggaaacgccgtcaaatcggggggagtcggcggtgttg
agttttgtcaactggttgacgttaagtggagccgagcagtcgggactcagaggaccctcc
acggaaaaccaagaggccaagcaggctgccatcctctgcataaagcaatgtgaccccgaa
aagctgatcacagagagtaaatttttacagctggagtctctgcaggagctaatgaaggct
ctgatatcagtcaccccagatgaagagacgtatgatgaagaggatgctgccttctgcttg
gagatgttgctgcggatcattctggagaaccgagaccgtgtatcatgtgtgtggcagaca
gtgcgagaccatctctgccatctctgcgtccaccccaacgagagctgcttcctggtggag
agggctgtggtgggactccttcgactcgcgatccgcctgctacgacgagaagacgttagc
tctcaggttctcctctcactgcgtctccttctgatgatgaagcccccagtcctggcccgg
gtcagcagggaggtggcctatggcctccatgagctgctgaagaccaacgctgccaacatc
cactgtacaaacgactggttcacgctcttctccctgctggagtgcatcggagccggggtg
aaacctcctgcctcattccagctcacctctagcacaccggacagcgacacaggagcccag
tcagatagcgagctgccatctcctcatcttagtgaagtgagttcagagcgtggctacacg
tctgactccggggtctacaccgagcacagcaagaccaggatccctcgctcagcaacagat
gtggacgtagcaagcagtggatggctagtggttgggaaagatgacctggagacgagtaag
acccctcttgtaaactctaaagctcagttgaatcacccgctggtcaaccagtacagtctg
acgctgggccaggacctgggccagcacgacaccaagtctctcatcaagtgtgtggaaacg
ctgtcgttcatcgtccgggatgccgcccatgtcaccccggacaactttgagctgtgtgtt
cgagctatacgagtgtttgtggaggccagtctcaacggaggttaccgcaaccacgataag
aagaagagccacaagtatgactcctccaagtcccggatgagaaagaaggccgggggaagg
gacaaggaggggggaggtggcccgaggcgaggtggcggcagggcgtccagccagcgtccg
tcacgttcccacagtgacgaggaggaggacgagggtgtcccggctagctaccacacggtg
tcattacaggttagtcaggacctattagacctgatgcacactctgcacacgcgggctgcc
agcatctacagctcctgggcagaggagcagcgccaccgggaggctgcagggaggaagatc
gaggccgactcccagactctgtggaccagctgctggtgcccgctgctgcaaggcattgct
tggctgtgctgtgatgccaggcgacaggttcgtatgcaggccctcacctacctccagagg
gcactgctggtccatgatctgcagacactggatgcaactgagtgggagtcttgcttcaat
aaggtgcttttccccctgctgactaagctgcttgacaacatcagcccagcagatgtgggt
ggtatggaggagaccaggatgagagcctgcacactcctctcaaaggttttcctgcagcac
ctctctcctctgctgtccctgccaacctttgctgccctttggctcaccattctggatttc
atggacaagtacatgcacgcaggatccagtgacttactgttggaggcaatccctgagtct
ctgaagaacatgctgctggtgatggacacagcagggatcttccacagcgctgactccagg
acaggatactccgacctgtgggaaatcacctgggaacgaatcgtctgcttcctgcctcac
ctgagggaggagctcttcaaacagacggtcataccagatccagtacccagtcctgcagca
gaacccgtgcagcctccaccctcagcaggccagccctcatcccctcaggtgtctccacca
cctgtccagccgccctccccagtcccagccccccctgcagagacacagacccccagcagg
ccagcatccccccaggagccccaaccagccagtgccaacggtaacactgcaggatcagac
cgctcgtctccagtccccccctcaatcccccccctgcccgtgccgctaacgacgtccccc
acccaggctccctcccccctgagccagtcccccctcatcctgcagcccctggcctccccc
ctgcaggtgggggtcccgcccatgtccctgccgatcatcctgaaccccgccctgattgag
gccacgtccccggtgccgctgctgcccagtcccagagctacgagcccttctgaccaggtc
aagtaa
DBGET
integrated database retrieval system
